AMCG00019781


Basic Information

Item Value
gene id AMCG00019781
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 44332645 ~ 44339115 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019781
ATGACATCCAGGTTCTCACTCACTTTGCCttGTGTGGAAGCTGCAGCACCATCTTCCCTCCAGGAAGTGGCCACTCCTCACGCTCGCCTGAGCTACTGGGGGGGCATGTCGCTGTACGCCCCTGGCCACAGTGCTGAACCTCTCCTTGGAGCCCAGCCTCACCGCGTCCTCCTCCGCCTGTTGGAGCTGACAGCAGCGGAGCCCGCGCTCGGCCGTGCCCCTGGGGTACTGCTGCAGCGCCAGCTCCAGAAGTTTCTGCTGGTTCTGGGTCCATACCTCCTCTGGTACCGGCCCGTGGTCTTGGGCTTTCCTGTCATCCCCGCTGTCTTCGTCCAGCGCCAGGCTGTCAAAGTCTCTCTGCCGCCGACCTTTAGGCTTCTCCTCGCCCCCTTCCGGCTTGCCACCGGCACTCTTCACTGGGCCCTTGGCTGCTCTCCTCCTGCGCGGCCTGCCCTCTGTGCCCGAGGACTCCGCCAGACTGCCCTCGGCCTCCTCCCCCGGCTCCCCTACCTCCTGGGCCGGGGTGTGTCCTCCTCCCGCCTGGTGATAATGCTGTCCGACAGGCCGGCTCCTCCTGCCCCTTTCAAGCCCTTCGCTGACTGGCTAGAGCTCTTGAGCTCTGAGAACTTCACCAGCCCTGAGGAGAAACAAAAGAAGCAATGCTAA

Function

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019781 True 666 mRNA 0.64 5 44332645 44339115

Neighbor

gene id symbol gene type direction distance location
AMCG00019780 mllt10,LOC107595146,LOC107549202,LOC107695408 coding upstream 497 44276851 ~ 44332148 (+)
AMCG00019784 NA coding upstream 63432 44266241 ~ 44269213 (+)
AMCG00019775 riok1,LOC107589821,LOC107689403 coding upstream 261988 44060525 ~ 44070657 (+)
AMCG00019773 rreb1 coding upstream 287970 44014510 ~ 44044675 (+)
AMCG00019770 NA coding upstream 368377 43949035 ~ 43964268 (+)
AMCG00019786 bmi1 coding downstream 105776 44444891 ~ 44453292 (+)
AMCG00019787 spag6,LOC107686700,LOC107741767 coding downstream 140347 44479462 ~ 44497485 (+)
AMCG00019793 NA coding downstream 270902 44610017 ~ 44637909 (+)
AMCG00019791 LOC107589950 coding downstream 346376 44685491 ~ 44694369 (+)
AMCG00019794 NA coding downstream 365112 44704227 ~ 44710483 (+)
G37132 NA non-coding upstream 44276 44236214 ~ 44288369 (+)
G37102 NA non-coding upstream 281214 44046329 ~ 44051431 (+)
G37070 NA non-coding upstream 398326 43934103 ~ 43934319 (+)
G37068 LOC103376870 non-coding upstream 417826 43914192 ~ 43914819 (+)
G37011 NA non-coding upstream 755388 43576248 ~ 43577257 (+)
G37168 NA non-coding downstream 65477 44404592 ~ 44406930 (+)
G37199 NA non-coding downstream 175853 44514968 ~ 44517929 (+)
G37231 NA non-coding downstream 442002 44781117 ~ 44781942 (+)
G37268 cunh7orf25,LOC107722560,LOC105900630 non-coding downstream 512669 44851784 ~ 44854518 (+)
G37274 NA non-coding downstream 545691 44884806 ~ 44936756 (+)
G37105 ssr1 other upstream 276042 44053074 ~ 44056603 (+)
G36954 NA other upstream 999332 43330292 ~ 43333313 (+)
AMCG00019758 NA other upstream 1061453 43261894 ~ 43271192 (+)
AMCG00019755 NA other upstream 1369987 42960656 ~ 42962658 (+)
AMCG00019751 NA other upstream 1705540 42624730 ~ 42627105 (+)
AMCG00019785 NA other downstream 96807 44435922 ~ 44443756 (+)
G37372 sugct,LOC107687505 other downstream 940340 45279455 ~ 45569937 (+)
G37561 LOC100136012 other downstream 2451912 46791027 ~ 46791485 (+)
AMCG00019820 efr3a other downstream 3283653 47622768 ~ 47658001 (+)
G37779 NA other downstream 4111513 48450628 ~ 48451167 (+)

Expression


Co-expression Network