G37561 (LOC100136012)


Basic Information

Item Value
gene id G37561
gene name LOC100136012
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 46791027 ~ 46791485 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU46904
ATgtcacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatcgccaagcagcttggtgagaaggtgacaacagttggtgcgattattcgcatgcaagatctcacctcgtggagtttcaatgatcatgagaacggtgaggaatcagcccagaactacatgggaggatcttgttaatgatctcaaggcagctgggaccatagtcaccaagaaaacaattggtaacacactatgccgtgaaggactgaaatcctgcagcgcccgcaaggtccccctgctcaagaaagctcatgtacaggcccatctgaagtttgccaa

Function

NR:

description
transposase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46904 True 409 TUCP 0.49 2 46791027 46791485

Neighbor

gene id symbol gene type direction distance location
AMCG00019812 LOC106590186 coding upstream 19458 46664207 ~ 46771569 (+)
AMCG00019804 NA coding upstream 1532068 45257308 ~ 45258959 (+)
AMCG00019803 NA coding upstream 1553626 45206216 ~ 45237401 (+)
AMCG00019796 rala,LOC103042957,LOC105025131,LOC107565693 coding upstream 1617109 45158209 ~ 45173918 (+)
AMCG00019798 NA coding upstream 1725739 45064638 ~ 45065288 (+)
AMCG00019811 NA coding downstream 31761 46823246 ~ 46836213 (+)
AMCG00019814 NA coding downstream 49963 46841448 ~ 46844186 (+)
AMCG00019810 NA coding downstream 58434 46849919 ~ 46861698 (+)
AMCG00019817 NA coding downstream 277511 47068996 ~ 47069748 (+)
AMCG00019821 efr3a,LOC107749108 coding downstream 788807 47580292 ~ 47593154 (+)
G37524 NA non-coding upstream 218229 46572301 ~ 46572798 (+)
G37521 NA non-coding upstream 225929 46555190 ~ 46565098 (+)
G37516 NA non-coding upstream 240472 46548815 ~ 46550555 (+)
G37514 NA non-coding upstream 244678 46545171 ~ 46546349 (+)
G37486 LOC107575789 non-coding upstream 397929 46365327 ~ 46393098 (+)
G37567 NA non-coding downstream 8631 46800116 ~ 46800414 (+)
G37630 NA non-coding downstream 373509 47164994 ~ 47165220 (+)
G37655 NA non-coding downstream 608241 47399726 ~ 47467840 (+)
G37678 NA non-coding downstream 894885 47686370 ~ 47686811 (+)
G37679 NA non-coding downstream 895405 47686890 ~ 47690253 (+)
G37372 sugct,LOC107687505 other upstream 1221090 45279455 ~ 45569937 (+)
AMCG00019785 NA other upstream 2347271 44435922 ~ 44443756 (+)
G37105 ssr1 other upstream 2734424 44053074 ~ 44056603 (+)
G36954 NA other upstream 3457714 43330292 ~ 43333313 (+)
AMCG00019758 NA other upstream 3519835 43261894 ~ 43271192 (+)
AMCG00019820 efr3a other downstream 831283 47622768 ~ 47658001 (+)
G37779 NA other downstream 1659143 48450628 ~ 48451167 (+)
G37962 NA other downstream 2766997 49558482 ~ 49561383 (+)
G37964 NA other downstream 2771409 49562894 ~ 49563214 (+)
G37968 NA other downstream 2779702 49571187 ~ 49571486 (+)

Expression


Co-expression Network