AMCG00019803


Basic Information

Item Value
gene id AMCG00019803
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 45206216 ~ 45237401 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019803
AGAACAGGCAAGTCGCGAAGCCGCAGCCCCTATACCTCCCGTCACTCACGCTCACGCAGCCGGCATCGCCACTCACGTTCCCACAGCCGCCCTTCCAGCATCTCCCCCAGCACCCTCACCTTCAAGACGAGCCTGGCTGCTGAGctaagcaaacagaaaaaggccAAAGCTGCAGAAGCAGCACGCACAGGGGCCAAGAACTCCAATGCGTCCACACCCACCAAGGGCCCACCGCCCACTGCCACCGCCACTGCAACACCCCAGCCTTGCCCTAACAGCCAAACCAAGGAGGCCAAGAAACCAAGGTtagacccccccccctccccacatcCTGAGAGGCCCACCAAGCCCCAAACTGAGGGCCTGAGCCAACCTCAGTCTCCAGCTGAATGGTCTGCTAAAAGGACAGCTCCTAAAGATGCCAAAGTGAAAGATGAACCTCCCTTGCCACCCAAGGAGAAGAGAAAGCCCCCAGTGCCCAGCAGCCAGGGATCCAAGGAAAAAGAACGTGTGTCAGTTCTCCCTAACTCTACCCTCACCTCCTTACCACTGCCTCCTGTGCTATCTGAAGACTTGGGAAATGCTGAAAGtttaaaagACTATCTCTCCTCAAGATCAGACAAGAAGAGGTCTGAGAGAAAGCCTCGCCATCTCCTTAGTGAGCTCCCTCTGCCTCCAGAACTCCCTGGAGGAGATCCTTCTTCTCCTCACAGTCCTGAGGACAGGAAGGTTGCAACCCTGCCAGTCCTCAAACGCAGACCAAAaatctgtGGCCCTCGGTTTGGTGAAATAAAGGAGACTGAGATAGACTGGGGAAAGAGATGTTATTTTGGGGTGCTAAAGTCAAGTTTTCTCGCCCCCATAGCTGAGATGGTAGCACTGAAGAAAGTGCGTCTAGACAATGAGAAGGAAGGTTTCCCCATCACCGCCATTCGAGAGATCAAAATACTTCGACAGTTGAATCACAAGAGCATCATCAACATGAAGGAAATTGTAACTGATAAGGAGGATGCCTTGGACTTCAAGAATGACAAAGgtgCATTTTACTTGGTGTTTGAATACATGGACCATGATCTCATGGGCCTGTTGGAATCTGGATTAGTACATTTCAATGAAAGTCATATTAAGTCTTTCATGAGGCAACTAATGGAAGGACTGGATTACTGTCACAAAAAAAACTTCTTACACCGAGACATCAAGTGTTCAAACATCCTTCTTAATAACAGGGGGCAGATTAAGCTTGCTGATTTTGGTCTGGCACGGCTGTACAATTCAGAAGAAAGCCGACCTTACACAAACAAAGTAATAACGCTGTGGTACCGTCCACCAGAGTTGctgctgggagaggagaggTATTCTCCAGCCATTGATGTCTGGAGCTGTGGGTGTATTCTAGGGGAACTGTTCATGAAGAAACCTATCTTTCAAGCAAACCAGGAGCTTGCTCAGCTAGAACTTATCAGCAGGATCTGTGGTAGCCCTTGTCCAGCAGTTTGGCCTGATGTTATAAAGTTGCCATATTTTAATACCATGAAACCAAAGAAACAATATCGAAGACGATTACGGGAAGAATTTGCATTTATCCCAACAGCAGCACTAGATCTCTTTGATCATATGCTTGCACTGGACCCCAGCAAGCGTTGTACTGCTGAACAGGCTCTTCAAAGTGATTTCCTCAAGGATGTGGATCCTGCCAAAATGCCTACCCCTGAGAGGCAGAAGCAGATGCCTGAGGAGGTGACTGCTCCCAAGGTCCCTAGGAAAGATACTGCCTTTGGAATGGATGACAGCAGAAACAACACACCTCAAGGAATTCCTCCCAGTCAACACAAATCTCAGGGCACATCCAGCATAGGACTTGATACTAAAGGCACTGGATCTCAGCTGACCCAGGAGCAGCTGACAGTTCTGCTGAATCTGCTCCAGTCAAAGACCTCAGTCAGCATGGCTCAGTTCGCTCAGGTCATGAACATCAAAGTTAACCCAGAGACGCTTCAGCAACTCAACAAGCTGTCACTTCCTGCTGGGATCCTCTCTGAGGCAGAAAAGGCCCAGGAAATCCAGCCACCTCAACCCCTCCAGGAGCCTCATAAGGCAGCTGCAACATGTCCACATCCTGCCCCCTGTGTGCCTCGAACACCGCCACTGCCACCTCAGCTCAAAGTCGAGGGGGAGGCTGCCCCTACTGCTATCCAGAACGCCTTCACTGTGCTACTCGCCCAGCTGCTGAAGGTCCAGCAGATGCAGAAGAAAGAGCCCACAGTTCAAGGAGAGGTAGAGTTCAGTGCTGGGAACGATGTGCCTCAGGAGGATGAGCAGGCCATAGAGGCCAGTACTTCTGCTACACCAGTGTCAGAAGATGGTGTCGCACAACAAGAGAATGTCCCTGCTCCTGAGCCTCCACGTATCCTTCCTCCAGATCAAAGGCCCCCTGAACCTCCTGAGCCCCCACCAGTCACAGAGGACTTGGACTACCGGCCAGAGATGCCACCTCAGTCGGGATGCGTGTCCCTTGCAGGCCCCTCGGACCCGCATGGTGAAGTCAAAGCTGCCCTTTTGCAGCTCTTAAACCAGAATAGTGCCCCTGAACCGGAATTTCAGCCTGAGGGTACCTATCGCCCAGATGGCAGCGATTACAGAGACCGCTTTGGGCTAGTTCCTTCATTTTCTTCCAGTGGGTACTCCACCGAGGGTTTTGGGAGCAGCTACCTGGGCAGTGGGGAGAGGTCAAGCTTCTTGAGTGGGCTAGGGGGAGGATTGCAGTCTCATGCACTGAGAGAGATGTTTAGTGGTGCAGTCTCTGCTTCTCAAGCTGGTAGCAGTGGGTGCCCCCTGACTCCTGGCTACCAGGAGCCTTTCTCCAGTACTTTGACCTATGGAGATAGTGGGGCCAGTGGAAGCAGCTATTCAGGGCGGGGAGGAGCCAGTATGATGTTCAGTGGGGATAAGGACCATCGCTTTGAGTATAATCACAGCCCCTTACCTGTGCTGGTGAACAGCAGCAATTCAGAGTGTGCTCACGGGGGAAGCTTTCCCCTGCCAGGCAGTGTCCACACCTACAACCATGGCCTGAGCAGGCAGGACAGTGCTCCGACAGGGGGACATCCACAGTCCCAGAGCTGGGGATCCCCCTCTCAAGGTGGGGCCTACCCCCAAGGCTACAggtcacacataaacacatcCACACTGAGGGGCAGGGGGTTACCATAC

Function

GO: NA

KEGG:

id description
K08819 CDK12_13; cyclin-dependent kinase 12/13

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019803 True 3210 mRNA 0.52 13 45206216 45237401

Neighbor

gene id symbol gene type direction distance location
AMCG00019796 rala,LOC103042957,LOC105025131,LOC107565693 coding upstream 32298 45158209 ~ 45173918 (+)
AMCG00019798 NA coding upstream 140928 45064638 ~ 45065288 (+)
AMCG00019797 NA coding upstream 270607 44925531 ~ 44935609 (+)
AMCG00019795 NA coding upstream 428112 44769645 ~ 44778104 (+)
AMCG00019792 NA coding upstream 441412 44740078 ~ 44764804 (+)
AMCG00019804 NA coding downstream 19907 45257308 ~ 45258959 (+)
AMCG00019812 LOC106590186 coding downstream 1426806 46664207 ~ 46771569 (+)
AMCG00019811 NA coding downstream 1585845 46823246 ~ 46836213 (+)
AMCG00019814 NA coding downstream 1604047 46841448 ~ 46844186 (+)
AMCG00019810 NA coding downstream 1612518 46849919 ~ 46861698 (+)
G37335 NA non-coding upstream 41091 45160708 ~ 45165125 (+)
G37300 NA non-coding upstream 230790 44952385 ~ 44975426 (+)
G37274 NA non-coding upstream 269460 44884806 ~ 44936756 (+)
G37279 NA non-coding upstream 300777 44901806 ~ 44905439 (+)
G37268 cunh7orf25,LOC107722560,LOC105900630 non-coding upstream 351698 44851784 ~ 44854518 (+)
G37373 NA non-coding downstream 46720 45284121 ~ 45284395 (+)
G37440 NA non-coding downstream 582084 45819485 ~ 45822121 (+)
G37455 NA non-coding downstream 743418 45980819 ~ 45981041 (+)
G37486 LOC107575789 non-coding downstream 1127926 46365327 ~ 46393098 (+)
G37514 NA non-coding downstream 1307770 46545171 ~ 46546349 (+)
AMCG00019785 NA other upstream 762460 44435922 ~ 44443756 (+)
G37105 ssr1 other upstream 1149613 44053074 ~ 44056603 (+)
G36954 NA other upstream 1872903 43330292 ~ 43333313 (+)
AMCG00019758 NA other upstream 1935024 43261894 ~ 43271192 (+)
AMCG00019755 NA other upstream 2243558 42960656 ~ 42962658 (+)
G37372 sugct,LOC107687505 other downstream 42054 45279455 ~ 45569937 (+)
G37561 LOC100136012 other downstream 1553626 46791027 ~ 46791485 (+)
AMCG00019820 efr3a other downstream 2385367 47622768 ~ 47658001 (+)
G37779 NA other downstream 3213227 48450628 ~ 48451167 (+)
G37962 NA other downstream 4321081 49558482 ~ 49561383 (+)

Expression


Co-expression Network