RNA id: AMCG00019803


Basic Information

Item Value
RNA id AMCG00019803
length 3210
RNA type mRNA
GC content 0.52
exon number 13
gene id AMCG00019803
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 45206216 ~ 45237401 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGAACAGGCAAGTCGCGAAGCCGCAGCCCCTATACCTCCCGTCACTCACGCTCACGCAGCCGGCATCGCCACTCACGTTCCCACAGCCGCCCTTCCAGCATCTCCCCCAGCACCCTCACCTTCAAGACGAGCCTGGCTGCTGAGctaagcaaacagaaaaaggccAAAGCTGCAGAAGCAGCACGCACAGGGGCCAAGAACTCCAATGCGTCCACACCCACCAAGGGCCCACCGCCCACTGCCACCGCCACTGCAACACCCCAGCCTTGCCCTAACAGCCAAACCAAGGAGGCCAAGAAACCAAGGTtagacccccccccctccccacatcCTGAGAGGCCCACCAAGCCCCAAACTGAGGGCCTGAGCCAACCTCAGTCTCCAGCTGAATGGTCTGCTAAAAGGACAGCTCCTAAAGATGCCAAAGTGAAAGATGAACCTCCCTTGCCACCCAAGGAGAAGAGAAAGCCCCCAGTGCCCAGCAGCCAGGGATCCAAGGAAAAAGAACGTGTGTCAGTTCTCCCTAACTCTACCCTCACCTCCTTACCACTGCCTCCTGTGCTATCTGAAGACTTGGGAAATGCTGAAAGtttaaaagACTATCTCTCCTCAAGATCAGACAAGAAGAGGTCTGAGAGAAAGCCTCGCCATCTCCTTAGTGAGCTCCCTCTGCCTCCAGAACTCCCTGGAGGAGATCCTTCTTCTCCTCACAGTCCTGAGGACAGGAAGGTTGCAACCCTGCCAGTCCTCAAACGCAGACCAAAaatctgtGGCCCTCGGTTTGGTGAAATAAAGGAGACTGAGATAGACTGGGGAAAGAGATGTTATTTTGGGGTGCTAAAGTCAAGTTTTCTCGCCCCCATAGCTGAGATGGTAGCACTGAAGAAAGTGCGTCTAGACAATGAGAAGGAAGGTTTCCCCATCACCGCCATTCGAGAGATCAAAATACTTCGACAGTTGAATCACAAGAGCATCATCAACATGAAGGAAATTGTAACTGATAAGGAGGATGCCTTGGACTTCAAGAATGACAAAGgtgCATTTTACTTGGTGTTTGAATACATGGACCATGATCTCATGGGCCTGTTGGAATCTGGATTAGTACATTTCAATGAAAGTCATATTAAGTCTTTCATGAGGCAACTAATGGAAGGACTGGATTACTGTCACAAAAAAAACTTCTTACACCGAGACATCAAGTGTTCAAACATCCTTCTTAATAACAGGGGGCAGATTAAGCTTGCTGATTTTGGTCTGGCACGGCTGTACAATTCAGAAGAAAGCCGACCTTACACAAACAAAGTAATAACGCTGTGGTACCGTCCACCAGAGTTGctgctgggagaggagaggTATTCTCCAGCCATTGATGTCTGGAGCTGTGGGTGTATTCTAGGGGAACTGTTCATGAAGAAACCTATCTTTCAAGCAAACCAGGAGCTTGCTCAGCTAGAACTTATCAGCAGGATCTGTGGTAGCCCTTGTCCAGCAGTTTGGCCTGATGTTATAAAGTTGCCATATTTTAATACCATGAAACCAAAGAAACAATATCGAAGACGATTACGGGAAGAATTTGCATTTATCCCAACAGCAGCACTAGATCTCTTTGATCATATGCTTGCACTGGACCCCAGCAAGCGTTGTACTGCTGAACAGGCTCTTCAAAGTGATTTCCTCAAGGATGTGGATCCTGCCAAAATGCCTACCCCTGAGAGGCAGAAGCAGATGCCTGAGGAGGTGACTGCTCCCAAGGTCCCTAGGAAAGATACTGCCTTTGGAATGGATGACAGCAGAAACAACACACCTCAAGGAATTCCTCCCAGTCAACACAAATCTCAGGGCACATCCAGCATAGGACTTGATACTAAAGGCACTGGATCTCAGCTGACCCAGGAGCAGCTGACAGTTCTGCTGAATCTGCTCCAGTCAAAGACCTCAGTCAGCATGGCTCAGTTCGCTCAGGTCATGAACATCAAAGTTAACCCAGAGACGCTTCAGCAACTCAACAAGCTGTCACTTCCTGCTGGGATCCTCTCTGAGGCAGAAAAGGCCCAGGAAATCCAGCCACCTCAACCCCTCCAGGAGCCTCATAAGGCAGCTGCAACATGTCCACATCCTGCCCCCTGTGTGCCTCGAACACCGCCACTGCCACCTCAGCTCAAAGTCGAGGGGGAGGCTGCCCCTACTGCTATCCAGAACGCCTTCACTGTGCTACTCGCCCAGCTGCTGAAGGTCCAGCAGATGCAGAAGAAAGAGCCCACAGTTCAAGGAGAGGTAGAGTTCAGTGCTGGGAACGATGTGCCTCAGGAGGATGAGCAGGCCATAGAGGCCAGTACTTCTGCTACACCAGTGTCAGAAGATGGTGTCGCACAACAAGAGAATGTCCCTGCTCCTGAGCCTCCACGTATCCTTCCTCCAGATCAAAGGCCCCCTGAACCTCCTGAGCCCCCACCAGTCACAGAGGACTTGGACTACCGGCCAGAGATGCCACCTCAGTCGGGATGCGTGTCCCTTGCAGGCCCCTCGGACCCGCATGGTGAAGTCAAAGCTGCCCTTTTGCAGCTCTTAAACCAGAATAGTGCCCCTGAACCGGAATTTCAGCCTGAGGGTACCTATCGCCCAGATGGCAGCGATTACAGAGACCGCTTTGGGCTAGTTCCTTCATTTTCTTCCAGTGGGTACTCCACCGAGGGTTTTGGGAGCAGCTACCTGGGCAGTGGGGAGAGGTCAAGCTTCTTGAGTGGGCTAGGGGGAGGATTGCAGTCTCATGCACTGAGAGAGATGTTTAGTGGTGCAGTCTCTGCTTCTCAAGCTGGTAGCAGTGGGTGCCCCCTGACTCCTGGCTACCAGGAGCCTTTCTCCAGTACTTTGACCTATGGAGATAGTGGGGCCAGTGGAAGCAGCTATTCAGGGCGGGGAGGAGCCAGTATGATGTTCAGTGGGGATAAGGACCATCGCTTTGAGTATAATCACAGCCCCTTACCTGTGCTGGTGAACAGCAGCAATTCAGAGTGTGCTCACGGGGGAAGCTTTCCCCTGCCAGGCAGTGTCCACACCTACAACCATGGCCTGAGCAGGCAGGACAGTGCTCCGACAGGGGGACATCCACAGTCCCAGAGCTGGGGATCCCCCTCTCAAGGTGGGGCCTACCCCCAAGGCTACAggtcacacataaacacatcCACACTGAGGGGCAGGGGGTTACCATAC

Function

GO: NA

KEGG:

id description
K08819 CDK12_13; cyclin-dependent kinase 12/13

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46650 lncRNA upstream 41091 45160708 ~ 45165125 (+) True G37335
TU46607 lncRNA upstream 230790 44952385 ~ 44975426 (+) True G37300
TU46572 lncRNA upstream 269460 44884806 ~ 44936756 (+) True G37274
TU46578 lncRNA upstream 300777 44901806 ~ 44905439 (+) True G37279
TU46565 lncRNA upstream 351698 44851784 ~ 44854518 (+) True G37268
TU46695 lncRNA downstream 46720 45284121 ~ 45284395 (+) True G37373
TU46692 lncRNA downstream 177336 45414737 ~ 45569937 (+) True G37372
TU46763 lncRNA downstream 582084 45819485 ~ 45822121 (+) True G37440
TU46779 lncRNA downstream 743418 45980819 ~ 45981041 (+) True G37455
TU46812 lncRNA downstream 1127926 46365327 ~ 46393098 (+) True G37486
AMCG00019796 mRNA upstream 32298 45158209 ~ 45173918 (+) True AMCG00019796
AMCG00019798 mRNA upstream 140928 45064638 ~ 45065288 (+) True AMCG00019798
AMCG00019797 mRNA upstream 270607 44925531 ~ 44935609 (+) True AMCG00019797
AMCG00019795 mRNA upstream 428112 44769645 ~ 44778104 (+) True AMCG00019795
AMCG00019792 mRNA upstream 441412 44740078 ~ 44764804 (+) True AMCG00019792
AMCG00019804 mRNA downstream 19907 45257308 ~ 45258959 (+) True AMCG00019804
AMCG00019812 mRNA downstream 1426806 46664207 ~ 46771569 (+) True AMCG00019812
AMCG00019811 mRNA downstream 1585845 46823246 ~ 46836213 (+) True AMCG00019811
AMCG00019814 mRNA downstream 1604047 46841448 ~ 46844186 (+) True AMCG00019814
AMCG00019810 mRNA downstream 1612518 46849919 ~ 46861698 (+) True AMCG00019810
TU46357 other upstream 1149613 44053074 ~ 44056603 (+) True G37105
TU46181 other upstream 1872903 43330292 ~ 43333313 (+) True G36954
TU46165 other upstream 1935331 43261894 ~ 43270885 (+) False AMCG00019758
TU46131 other upstream 2243558 42960656 ~ 42962658 (+) True AMCG00019755
TU46002 other upstream 2647280 42556540 ~ 42558936 (+) True AMCG00019747
TU46693 other downstream 42054 45279455 ~ 45339619 (+) False G37372
TU46904 other downstream 1553626 46791027 ~ 46791485 (+) True G37561
TU47161 other downstream 3213227 48450628 ~ 48451167 (+) True G37779
TU47362 other downstream 4321081 49558482 ~ 49561383 (+) True G37962
TU47365 other downstream 4325493 49562894 ~ 49563214 (+) True G37964

Expression Profile