G37279


Basic Information

Item Value
gene id G37279
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 44901806 ~ 44905439 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU46578
gggatcgagatggggtggtcagcagaaggtgaggaagagtgggggaaaaagaggagatctgatttggagaggttgagcttgaggtggtgcgagtgcatccaggcggaaatggcagacaagcaggaagagatgcgtgaggggatgagagggtcagaagagggaaaagacaggagaTCTGTGCCGATCGTGTTCAATCGGGTCTATGTGTCCCGGCTGGTTCCGGGTCCAGATTACAAATAATAGACGGCTCCGAGTAGGTTCCGGGTGGTACATTTACGGCATTTCTCAGTTCTGCACGTTCCgggtccaaactttcaaataatagacgggtctGGGTCGGTTCCGGATAGCACATTTTCGGGTCTCTTTGGGTTTGGGTACACATTTTTGGACCTGTGAAGACCTCTAGTGTGAAGCAGCTTGAAAACAAGgccaaattaagtaattgagagctcggttggaacaaaaaccagcaggataggtggtactccaggaccaggattgagaaccactgctttacaTAACTCATGATTTTTGGTGGAACGGGATGAGGGCCTTATCCTGTCCCTTCTCAAAATGGTGAATCATGTATTGAGAGAATGCTGTGTGTACTGTGATTTATCTGTAAAAAGTGCAATCACTGAATTTGCTAATCCACTAGCAACTGTGAAGAATGGACAATACtgatcataatattaataattcagctttattttatatagtaccCTGAAATCAAGTTTCACAGAGGACTTTACAGGCAgataattcaaacaaaaaaataattaacttatcATTAGTGACAAACAGGACCCCAGATTCCAAAGTACAAAGAGCATATGAGGGTGCAGATTTttgggattttaaaattaattctggTCCTAAACTAAAGCTATTCCAGCAATTCTAAGAAAGGAGTAATGTGGTCAGTACCCCGATCTGccATCGACATCAAGATGACCATGAGTGTGAGAAATTAGAAGCACATAAACCAAGAATGTCTGCCACTCAGCAGCTTGTTAAACAAATAGTAGAATCAAAGAAAGGGGCTCCAAACAGCAAAGGTCGAAGAGGGGCAAGAAACAGTGCAACAGCAGCAAAGGTGGCCTTGATGAAGCTGAAACTCTGTGCAACTGGGGATAAGTCGTTGCCACAGGTACTTTCATTATTATGTGGATGGAGTTACTCAAAACTTCATAACCTTGGAGAGGCTTCTCAGATTGTTTCtcaatttattaaatttatttcaattgtcctcatattgaaataaatggtGAGTCAAGtaatataaatggaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46578 True 1295 lncRNA 0.42 3 44901806 44905439

Neighbor

gene id symbol gene type direction distance location
AMCG00019795 NA coding upstream 123702 44769645 ~ 44778104 (+)
AMCG00019792 NA coding upstream 137002 44740078 ~ 44764804 (+)
AMCG00019790 NA coding upstream 165941 44723767 ~ 44735865 (+)
AMCG00019794 NA coding upstream 191323 44704227 ~ 44710483 (+)
AMCG00019791 LOC107589950 coding upstream 207437 44685491 ~ 44694369 (+)
AMCG00019797 NA coding downstream 20092 44925531 ~ 44935609 (+)
AMCG00019798 NA coding downstream 159199 45064638 ~ 45065288 (+)
AMCG00019796 rala,LOC103042957,LOC105025131,LOC107565693 coding downstream 252770 45158209 ~ 45173918 (+)
AMCG00019803 NA coding downstream 300777 45206216 ~ 45237401 (+)
AMCG00019804 NA coding downstream 351869 45257308 ~ 45258959 (+)
G37268 cunh7orf25,LOC107722560,LOC105900630 non-coding upstream 47288 44851784 ~ 44854518 (+)
G37231 NA non-coding upstream 119864 44781117 ~ 44781942 (+)
G37199 NA non-coding upstream 383877 44514968 ~ 44517929 (+)
G37168 NA non-coding upstream 494876 44404592 ~ 44406930 (+)
G37135 NA non-coding upstream 567109 44329019 ~ 44334697 (+)
G37300 NA non-coding downstream 46946 44952385 ~ 44975426 (+)
G37335 NA non-coding downstream 255269 45160708 ~ 45165125 (+)
G37373 NA non-coding downstream 378682 45284121 ~ 45284395 (+)
G37440 NA non-coding downstream 914046 45819485 ~ 45822121 (+)
G37455 NA non-coding downstream 1075380 45980819 ~ 45981041 (+)
AMCG00019785 NA other upstream 458050 44435922 ~ 44443756 (+)
G37105 ssr1 other upstream 845203 44053074 ~ 44056603 (+)
G36954 NA other upstream 1568493 43330292 ~ 43333313 (+)
AMCG00019758 NA other upstream 1630614 43261894 ~ 43271192 (+)
AMCG00019755 NA other upstream 1939148 42960656 ~ 42962658 (+)
G37372 sugct,LOC107687505 other downstream 374016 45279455 ~ 45569937 (+)
G37561 LOC100136012 other downstream 1885588 46791027 ~ 46791485 (+)
AMCG00019820 efr3a other downstream 2717329 47622768 ~ 47658001 (+)
G37779 NA other downstream 3545189 48450628 ~ 48451167 (+)
G37962 NA other downstream 4653043 49558482 ~ 49561383 (+)

Expression


Co-expression Network