G37135


Basic Information

Item Value
gene id G37135
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 44329019 ~ 44334697 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU46406
GGAACAAGTAGAAACATCTCGTGTAGGATTGACATatgctgatgatgatatttATATACTGGGGGAAGGGGACTTATTTTAGGTTTTAATCCGACAATGTCTGTAagagtttatatttatttaaaaggtcATTGATTTAGTTGATGCCTtgtatgttctctctctctctacctggACTGCAGCAGCACTGCCCCCACGAAGTCTAGCACTGCTGGACTGGGACTCCTCTCGGACCAGCAGCGGCAGATCCTCCATCACCagcaccagctccagctccagcagctcTTCTCCTCCCAGCAGTCTATACCGgaGCAGCACCAGGCCCTTCTGTACCAGTTaatacagcagcagcaccagcagcagcagctctcaGCGGCTGCCCAGCTGCCCATCAGCAGCCTCCTGCCCTCCGCACAGGGCGCCATGTCCAGCAACCCCTTCCTGGCCCTGCACACTGACCCATCCGCCCAGAAAGCACCTGTAAGCTCCCGACTGCCCGCCCCTGCGCCGGGCCTTAAGAAACCCCACTGCCGCTTCACACTAGAGAAAACGTTGTAACAAAATGGGGTCCCGTCGGGCTGCCAGGACTGCGGTCAGAATGAGGACAGAACAGGAAAAACATCCTCTCTATTAAACATGggtctttcattcattcatttgacCCTCTTGTCAGAATCCAGCCAGTGGTTTTCACCATGAGTTGAACTGCTGGATCTGTTTAATGACAGTTTTGTTTAATGGAGACTATTAAGATCATCTTCCAGAGCTGGAGGGAGGAGATCTGCAAATTCAGTGTCAAAATGTTTGGCTCCTGAGGGATTATAAGTCAAATTGAGGGTGGGGGGATagctgtataaataaacaaacctcaGTCTAAACTTGACTGAAATGCAGGGTGGTGCGAAAGTCCTGCCCCATTTTTAAGGCTGCTTGCAATGACTGTCCAGATTGTCGGTCATTAGCTCAGCAGCTCTCTGATTGGGTAAATCTGTGATGCCCACGCCCGTCTCCGCACTTTGGCGCTGGTCTGGAGACACTTGACCCTTCTGCTCGCCATCGTTCGGTCACAGGCCCTTCTGGATGCCGTTTTTTACCATCTGCAGAAGCACCGGGCAAACTCCCCTCACTGCCCCTCTCCGCCGGGGGAATCCTGCAGCACTCACAACCCGTGAAGAAAACCCAAATCTTTACCTTTGAAAATCCCTATGGGGCATCACTTTTGCACCACCTTGTATACCGAGTTCCTCTAAGTGAGGGGGCAGTAGTGCGAGGCCTGCAGTGGGATGGGGCGCAAGGTGGCGCTGCACTAAGACGGTCTGCGGACGCTCCGAGAGCCCTCCCCACCACCAGTATTCAAACCAAACATTTCTCATGCAGACAGCAGCCAGACAGTTAGTGACACTAAAGGCAATGCTGCCTACATTACTCTCACTGGACTTGGAAAACATGTCaatagtaatatttttttttcttttttttttttttttttctttgtccttttgtttttccagcgACTAACAGAGAAATCTGGACCAGTCACACAGGAGAAGAGCTGACAGAGGGGGTTTATGTGCCTGCAGTAGGATAGCACTTGTCCAGCCTATCTCTCAAGTGTAATCCACCCTTGACCAAAACTCAAGGCAGTTCCTTAAAGAGGAGGGAAAGGATTTCAGGCTTTACTTGACATTCCTCAAAGGCATGGGactgaaataaacataaatgtcACTTTCTTGCACTAAAATTGGAATTAATCACTTAATGTATTTCAGGGACTGCagagaaaaactacaaaaaagtgTTCAATAGAGTTCagctttatttatacaaaaatacgaattgtgtcaaaagccagAGTGAGGTTTTGTGCTGAACAGACTGGGCTGGGTTTATGTCTCAGTTGGAAGGATGCTGCAAAATGGACTTGCTGTGGTGTGGAGTGTGAAGCTCTGCACACGTGTGCTTTGTGCGCTTTACTCTGCCCATCCCTATAAGCTCTGTTGGGGTGTGTTTGGGTTTCAGTAAAAGAAAGACTGTGCGAAGTTCAGGGCAGTGTCCCTccagactggagctgcagttGCTTCGGAGGCTGGGAACAGCGCAGTGCGAGGCACTATAGCTCGGCTCGCCCCTGACTGACGGCCGGCCGAGAGCCACTGCAGTCCTGGGAGTGGCCGCCTGCCCCACGCTCCTCTGCCTGTGCCATGGCCTCCGGTGCCCGGGGCTTTAAGAGTCTGGGCAGCTGCTGGTGAACAAAAGGAGAAGAGCTGGATCTTGCTGTTGCGAAGGGAGCGTTCCTTTGAGAGGAGAGGAATCTCCGAAGCCTCGACCCAAGTGCCTGTTGCTAAGTCCATTGTTCAGGAGCTCGCTGTGGGGCTCGGGACAGGTCCGCCTGCTCTCCACACAATCCCTGTCAGAGATGTTCCAGTCCACCACCACCCCACTCACAGATTCTCAAAGATAGTGTGTGTCGCTCAGGCAATATACAACATGACATCCAGGTTCTCACTCACTTTGCCttgtaagtttaaaaaaaaaaaaaagaaaaaaaaaaaggtattgaATCTGTTCGGTCTGCGATTTCACTGTGCTGGAAGCGGgagttttgtttcctttttaatttattgatctGTTGTAAGATGGGCGTGAGATAATATATTTGAGAAGAGCCCAGAATTGTTCATTGTAGAGAATCGAGAGGTCTTTTCTACTGCTATACAATTTTGTTCAAAGACATGTGAAGCTTGCATCATTGTGTAACATACATCGACCACCTTTTCAAGAAAGATCAAATATATcccaggaaaaataaacaatattcattaaaactaaagcaaaactaCATTTTGAACTGGTGGACAGTTAGAAAATTGTTACCCATGTAAATTATTTAGTTCATCCACTGTGTACAGAGCTAACACTGCATTTTGGATTATAACAACCTTGAAAGGGTTAAATTGCACAGTTTTACCTCTTCTCTGTAAATACTTGTTTGTAATTCTCCTTGGTGTTGTGAAGAATTCTTAATGCAACCTCgatttttgctttaaaatatttctatcAGCCATTTGAGCAATGACTGGcaacaaagtattaatttatttttatatatgcagGGAAATTTTAAAAGTCTGGCACCGATTTTCTTGAATCTAAATGTAGTGTGCTTCCTTTTGGCCTGTCAGTTTCTCAGTTGCATACCAATCTTTGTACAGCATTCAAGCCTCAAGGAGTTTATATTTCACACAAATACACCAAAACAGGTTTTTAAGAGTTTtgtaagaagaaaaatgttgatttatattACGAGTTCATAGCAAAGGAactttttgttaaatattgattgtttctgTAGTGTAAAGCAATTTTTccaaaatgataaattaaaagcaatttacttgttttatttgtctgctATTTAACAGAGTGATTATAAAATCTTCCTACCTCTGCCTTTGGTGTTAAACTCTTTTACTTCTTACTTGAAAACCACTGATGCTGTGCAGACACTTCAGTAAAGGTTTTAACctgtttttctccccttttaTTGTTTACTACTGAATAGAAAAAGTTTGCCACAGCTGTTCAGGGTGCACTGTGCAGGGAGAGGGGCTCAGTCCGTTCACACCCTTTAGAGCACGGGCTCTGAAGAAGATCTACAGGGGATGTTTCCGTGATGGGGAAACAAGGATGTCGCAGTTTTTGTAAATGCACGTTGGCGTGATCACAGGTTACATGTGAGTTTTGGTTGTCTAACCAGCCTGCAGGGGGAGTGGGGATTGGATGCTGTTTGGGATCGTCCCAATCTTGTCTCCATACCAGCCCTTTCATCTTCACTGCCACATAAAACAGTGTACAAACAAGGTCGACTTCAGATTCGAATACTGATGTCAGAGACCCCAGGCTGCTGATCACAGGGCCGGATGCCTAGCTGTCCCGCACCCACCCTTCATCGATGTGCCCTGTGCTCAGCAGCCTGGGCTGCTCCTGCTCGTGGCAGGGGCACTACCGTTTCCCATTGCTGAAGATGTAACCAGGGTTTATATTTCAGTATCAGTGCAAAATAGTATTAGCCTGAACAaagataaatgtatacattttctaattatgcactgtattcaattaaaattacattaaggATTTCCAACAAAAATGCTTCTCTTGGTTAACAAGTAAACATTGTTCTCcccattcttaaaaataataatataatgaaattatgtaaaacaaataatttttcCTGTTCCAAGAACCTTGCTGTTCACAATCACACTTCACCATCGCATTTCACAATCACCACGCTGCTCACTTGCACTGCCAGATGATCGCTGGCTGTTCTTCCCCATTTTAGGGGAGTTCTGGAATATCCTTTATTTCATATTTGGAGGGGGAAAACAATATAATGGGAGGTTTAAGGGGGAAAATAATGCTTAGGAAAAAGTTTTTCTGATGTATATATAGGTTTTTACATTAACCAAAGCTGCATACAACTAACAGGATGCCAAAAGACTGCAATCAAAGCctttttaactaaaataaactg

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU46406 True 4540 lncRNA 0.45 3 44329019 44334697

Neighbor

gene id symbol gene type direction distance location
AMCG00019784 NA coding upstream 59806 44266241 ~ 44269213 (+)
AMCG00019775 riok1,LOC107589821,LOC107689403 coding upstream 258362 44060525 ~ 44070657 (+)
AMCG00019773 rreb1 coding upstream 284344 44014510 ~ 44044675 (+)
AMCG00019770 NA coding upstream 364751 43949035 ~ 43964268 (+)
AMCG00019767 fars2,LOC103399687 coding upstream 623934 43702543 ~ 43705085 (+)
AMCG00019786 bmi1 coding downstream 110194 44444891 ~ 44453292 (+)
AMCG00019787 spag6,LOC107686700,LOC107741767 coding downstream 144765 44479462 ~ 44497485 (+)
AMCG00019793 NA coding downstream 275320 44610017 ~ 44637909 (+)
AMCG00019791 LOC107589950 coding downstream 350794 44685491 ~ 44694369 (+)
AMCG00019794 NA coding downstream 369530 44704227 ~ 44710483 (+)
G37132 NA non-coding upstream 40650 44236214 ~ 44288369 (+)
G37102 NA non-coding upstream 277588 44046329 ~ 44051431 (+)
G37070 NA non-coding upstream 394700 43934103 ~ 43934319 (+)
G37068 LOC103376870 non-coding upstream 414200 43914192 ~ 43914819 (+)
G37011 NA non-coding upstream 751762 43576248 ~ 43577257 (+)
G37168 NA non-coding downstream 69895 44404592 ~ 44406930 (+)
G37199 NA non-coding downstream 180271 44514968 ~ 44517929 (+)
G37231 NA non-coding downstream 446420 44781117 ~ 44781942 (+)
G37268 cunh7orf25,LOC107722560,LOC105900630 non-coding downstream 517087 44851784 ~ 44854518 (+)
G37274 NA non-coding downstream 550109 44884806 ~ 44936756 (+)
G37105 ssr1 other upstream 272416 44053074 ~ 44056603 (+)
G36954 NA other upstream 995706 43330292 ~ 43333313 (+)
AMCG00019758 NA other upstream 1057827 43261894 ~ 43271192 (+)
AMCG00019755 NA other upstream 1366361 42960656 ~ 42962658 (+)
AMCG00019751 NA other upstream 1701914 42624730 ~ 42627105 (+)
AMCG00019785 NA other downstream 101225 44435922 ~ 44443756 (+)
G37372 sugct,LOC107687505 other downstream 944758 45279455 ~ 45569937 (+)
G37561 LOC100136012 other downstream 2456330 46791027 ~ 46791485 (+)
AMCG00019820 efr3a other downstream 3288071 47622768 ~ 47658001 (+)
G37779 NA other downstream 4115931 48450628 ~ 48451167 (+)

Expression


Co-expression Network