G30589


Basic Information

Item Value
gene id G30589
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 395501 ~ 398672 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU38241
TGGCGGCGTACAGCGCCGGGTTTGTGCTCCGGGGCATCTCACGCGTGTTCGCGGCGGCGCTGGGACCCGGCTGGGCTCGGGTCGGTCGGTACCGGATCTGCCCCTGCAGGCGGCTCGGCACCGAGGCGGAGACGCAGGAGGAAGCGGAGCGCAGGGCGGCGCAGCGGCGAGGTCATAAGGACCTCCTGAAGGAGTTTCCTCACCCGAAGAACCTGCTGCACAACACGCTGTCCCGGGCCCTGGGGCTCTCGGACCTCTCCCAGCACATCCAGTACAGCTGCACAGAGGGCCACGTCAAGAGGGCCACAGTGACCGTAAAGTGGCCGAGCAGGATGCAGTGGGAGGGCTCTGGCTTGCGCAAGATCGACGCTGAGCGCagggccgccgccgccgcctgCCGCACACtcaaggagATGGGTGTGTTGGGGCCGGGTGCTGAGTTGCCTCAACGCCTTTCTGCACTGAGTGGGAGACCTGCCTCTCTGtccgaggaggatgaggaggaggaagaggaggagcaggagggcGTGCTGGACGCCACCGACTTCTGGCAGCCTCAGAGAGACGTGCCGCGCCCCCCCCCCGAGCCCAGGCCGGCCCCAGGGGACCGCAGGGGGGcccatgctctctctctcttccctcagCCCAAAGCCCTGCTGGCCAAAGTCATCCAGATCGCCACCTCCTCCCAAAGCATCTCTgagctgctgcagtATCGCACTGACCAGAGGAAGCCCAGGACCTGCCAGCTGAGCCTTTGCTGGCCGGAGCCCCTGAGCTTCACAGCCACTGGACGGCACAAGAGCGAGGCGGAGAACAGGGCGGCTGCACTGGCCTGCCTGACCCTGAAGGAGCGTGGCCTGATTGATGGGAGCAACCGGCCGCTGACCCACGCCATGTACCACCTGGACAGCGTCCGGCAGCTAGGCGCCCTGGAGCGCCGGCCCTGCGCCCTGACCATCCCCCCCCGGCTGCAGGACCGCCTGCTCCACTACCTCACCCAGGTGTGTTCAGCGTTGGCTCAGTGCTCGtgctgctgtgttcagtgtgtgtctgtgN

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process
GO:0006260 DNA replication biological_process
GO:0006261 DNA-dependent DNA replication biological_process
GO:0006269 DNA replication, synthesis of RNA primer biological_process

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU38241 True 1059 TUCP 0.67 7 395501 398672

Neighbor

gene id symbol gene type direction distance location
AMCG00018984 NA coding upstream 136210 255473 ~ 259291 (+)
AMCG00018983 NA coding upstream 140054 246098 ~ 255447 (+)
AMCG00018981 NA coding upstream 149729 237250 ~ 245772 (+)
AMCG00018980 NA coding upstream 158257 234187 ~ 237244 (+)
AMCG00018979 NA coding upstream 161353 233389 ~ 234148 (+)
AMCG00018990 NA coding downstream 12811 411483 ~ 414872 (+)
AMCG00018989 NA coding downstream 61487 460159 ~ 473258 (+)
AMCG00018998 exosc4,exos4 coding downstream 99977 498649 ~ 503431 (+)
AMCG00019000 NA coding downstream 107963 506635 ~ 514431 (+)
AMCG00018997 NA coding downstream 160663 559335 ~ 560597 (+)
G30583 NA non-coding upstream 23703 370446 ~ 371798 (+)
G30549 NA non-coding upstream 113357 227976 ~ 282144 (+)
G30619 NA non-coding downstream 44496 443168 ~ 496520 (+)
G30699 NA non-coding downstream 610589 1009261 ~ 1026744 (+)
G30700 NA non-coding downstream 614339 1013011 ~ 1053885 (+)
G30723 NA non-coding downstream 739833 1138505 ~ 1139858 (+)
G30857 NA non-coding downstream 787725 1186397 ~ 1187225 (+)
G30527 NA other upstream 321270 73792 ~ 74231 (+)
AMCG00018999 NA other downstream 150844 549516 ~ 556904 (+)
AMCG00019012 NA other downstream 340554 739226 ~ 744083 (+)
G30698 NA other downstream 596655 995327 ~ 1001213 (+)
AMCG00019029 NA other downstream 799314 1197986 ~ 1199095 (+)
AMCG00019030 NA other downstream 815004 1213676 ~ 1237637 (+)

Expression


Co-expression Network