G30723


Basic Information

Item Value
gene id G30723
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1138505 ~ 1139858 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU38435
CAGTGTACGAAATGAGTTTACTGTAAAAACACTTAAACAAGAGCAGCAGATCACAGCTGACACCCTGTAGGGCAGCGGGCGAGGTATTGagcagtcagtgtgtgtgtgtctgtccgtgtgtgtgtgtctatcagtttgagagattgtgtgtGTGTGTGTGTCTATCAGTttgagagattgtgtgtgtgtgtgtgtgtgtgtgtgtatctatcagGATGgtagtgagtcagtgtgtccaGCAGTGCTGTTGCAGGATGTGCACTCTGTGATCAGAGCATGGAGTCTCTCAGACACGGCcacctgtgagagagagagagagagagtgagagtgagaga
>TU38436
CAGTGTACGAAATGAGTTTACTGTAAAAACACTTAAACAAGAGCAGCAGATCACAGCTGACACCCTGTAGGGCAGCGGGCGAGGTATTGagcagtcagtgtgtgtgtgtctgtccgtgtgtgtgtgtctatcagtttgagagattgtgtgtgtgtgtGTGTGTGTGTCTATCAGTttgagagattgtgtgtgtgtgtgtgtgtgtgtgtgtatctatcagGATGgtagtgagtcagtgtgtccaGCAGTGCTGTTGCAGGATGTGCACTCTGTGATCAGAGCATGGAGTCTCTCAGACACGGCcacctgtgagagagagagagagagagtgagagtgagaga
>TU38437
CAGTGTACGAAATGAGTTTACTGTAAAAACACTTAAACAAGAGCAGCAGATCACAGCTGACACCCTGTAGGGCAGCGGGCGAGGTATTGagcagtcagtgtgtgtgtgtctgtccgtgtgtgtgtgtctatcagtttgagagattgtgtgtgtgtgtgtGTGTGTGTGTCTATCAGTttgagagattgtgtgtgtgtgtgtgtgtgtgtgtgtatctatcagGATGgtagtgagtcagtgtgtccaGCAGTGCTGTTGCAGGATGTGCACTCTGTGATCAGAGCATGGAGTCTCTCAGACACGGCcacctgtgagagagagagagagagagtgagagtgagaga
>TU38438
CAGTGTACGAAATGAGTTTACTGTAAAAACACTTAAACAAGAGCAGCAGATCACAGCTGACACCCTGTAGGGCAGCGGGCGAGGTATTGagcagtcagtgtgtgtgtgtctgtccgtgtgtgtgtgtctatcagtttgagagattgtgtgtgtgtgtgtgtGTGTGTGTGTCTATCAGTttgagagattgtgtgtgtgtgtgtgtgtgtgtgtgtatctatcagGATGgtagtgagtcagtgtgtccaGCAGTGCTGTTGCAGGATGTGCACTCTGTGATCAGAGCATGGAGTCTCTCAGACACGGCcacctgtgagagagagagagagagagtgagagtgagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38435 False 336 lncRNA 0.49 2 1138505 1139858
TU38436 False 342 lncRNA 0.49 2 1138505 1139858
TU38437 False 344 lncRNA 0.49 2 1138505 1139858
TU38438 True 346 lncRNA 0.49 2 1138505 1139858

Neighbor

gene id symbol gene type direction distance location
AMCG00019021 NA coding upstream 24286 1098229 ~ 1114219 (+)
AMCG00019016 mafa,LOC107704507 coding upstream 277108 860483 ~ 861397 (+)
AMCG00019017 NA coding upstream 291178 837999 ~ 847327 (+)
AMCG00019013 NA coding upstream 357876 780393 ~ 780629 (+)
AMCG00019011 NA coding upstream 387465 744154 ~ 751040 (+)
AMCG00019020 NA coding downstream 38262 1178120 ~ 1183904 (+)
AMCG00019040 NA coding downstream 274752 1414610 ~ 1428982 (+)
AMCG00019041 NA coding downstream 414215 1554073 ~ 1557865 (+)
AMCG00019042 NA coding downstream 423165 1563023 ~ 1581623 (+)
AMCG00019050 NA coding downstream 488967 1628825 ~ 1641050 (+)
G30700 NA non-coding upstream 84620 1013011 ~ 1053885 (+)
G30699 NA non-coding upstream 111761 1009261 ~ 1026744 (+)
G30619 NA non-coding upstream 641985 443168 ~ 496520 (+)
G30583 NA non-coding upstream 766707 370446 ~ 371798 (+)
G30549 NA non-coding upstream 856361 227976 ~ 282144 (+)
G30857 NA non-coding downstream 46539 1186397 ~ 1187225 (+)
G30866 NA non-coding downstream 56074 1195932 ~ 1196202 (+)
G30869 NA non-coding downstream 86971 1226829 ~ 1228441 (+)
G30874 NA non-coding downstream 98018 1237876 ~ 1238710 (+)
G30878 NA non-coding downstream 116582 1256440 ~ 1256647 (+)
G30698 NA other upstream 137292 995327 ~ 1001213 (+)
AMCG00019012 NA other upstream 394422 739226 ~ 744083 (+)
AMCG00018999 NA other upstream 581601 549516 ~ 556904 (+)
G30589 NA other upstream 739833 395501 ~ 398672 (+)
G30527 NA other upstream 1064274 73792 ~ 74231 (+)
AMCG00019029 NA other downstream 58128 1197986 ~ 1199095 (+)
AMCG00019030 NA other downstream 73818 1213676 ~ 1237637 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other downstream 113508 1253366 ~ 1253735 (+)
AMCG00019033 NA other downstream 178764 1318622 ~ 1321493 (+)
AMCG00019046 NA other downstream 445967 1585825 ~ 1605545 (+)

Expression


Co-expression Network