G30874


Basic Information

Item Value
gene id G30874
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1237876 ~ 1238710 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU38637
CCTATAACACACGCtcatatagttttaaaatgtcccTTTTCAGTCAAGAAACTATATCTATAGTGTATTTTTTTGCTCAGCTCTGCATTCCTAATCCATATTGATGTGGAAACAACCTCGCTGCCTCGAGCACACGCAGTTGACTCTCTTTTTCCCGCAAGAAGGGCTGTGTGCGTGTTGCGTTGGACTGGGCAGGTTTTTTTAAGTCCCTTTTCACTGATACAATGATCTTAATAAGGGCTCTGAGCAGTGTAAAATGCCGTGCAAACTCACAATTTAGAAGTTTtctcagtatttttttattttaaatgtttacagatgtgtaatgtgttcttttaaaaaatatatcctgTTCTTTCCTGTCCTTTGAAGTGATTTAAAACGAACCCTTTGGGTTTAATCAAGAAAAGTACTGCATAGGTCTTATTTAAAGCatatagatattattattaataatgttattaatactaatattactgttgttgttaaAGGACATGATTatcgatgtatttatttagtactTAATGTATTGACTTAATGTACAGATTATGACTTCTTTCACACACTGGACACTAGATGAAGTCTGTAGTGACTGGAGGATAAGGGGCTTGGACAGTTCAGAGATATATTTCTTGGTGAGGCACTATGAATGGCATCACATTTCTATCAATGTCCATATTGTCCAGTCAAAAAATGTTTCTATGCCAAATATCTCACTCATTTACATGTGTGAACCAATTTCAAGGCAGGATATGAAGCAGATGGTCCCTCACTGGACTGCCATGATGCAGACTAGAGTCTCTTCATCACACTTCACCACCGTCCTGCCAAAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38637 True 835 lncRNA 0.37 1 1237876 1238710

Neighbor

gene id symbol gene type direction distance location
AMCG00019020 NA coding upstream 53972 1178120 ~ 1183904 (+)
AMCG00019021 NA coding upstream 123657 1098229 ~ 1114219 (+)
AMCG00019016 mafa,LOC107704507 coding upstream 376479 860483 ~ 861397 (+)
AMCG00019017 NA coding upstream 390549 837999 ~ 847327 (+)
AMCG00019013 NA coding upstream 457247 780393 ~ 780629 (+)
AMCG00019040 NA coding downstream 175900 1414610 ~ 1428982 (+)
AMCG00019041 NA coding downstream 315363 1554073 ~ 1557865 (+)
AMCG00019042 NA coding downstream 324313 1563023 ~ 1581623 (+)
AMCG00019050 NA coding downstream 390115 1628825 ~ 1641050 (+)
AMCG00019052 NA coding downstream 405657 1644367 ~ 1658275 (+)
G30869 NA non-coding upstream 9435 1226829 ~ 1228441 (+)
G30866 NA non-coding upstream 41674 1195932 ~ 1196202 (+)
G30857 NA non-coding upstream 50651 1186397 ~ 1187225 (+)
G30723 NA non-coding upstream 98018 1138505 ~ 1139858 (+)
G30700 NA non-coding upstream 183991 1013011 ~ 1053885 (+)
G30878 NA non-coding downstream 17730 1256440 ~ 1256647 (+)
G30887 NA non-coding downstream 71396 1310106 ~ 1310381 (+)
G30903 NA non-coding downstream 170761 1409471 ~ 1409958 (+)
G30910 NA non-coding downstream 177241 1415951 ~ 1416163 (+)
G30937 NA non-coding downstream 313934 1552644 ~ 1552862 (+)
AMCG00019030 NA other upstream 239 1213676 ~ 1237637 (+)
AMCG00019029 NA other upstream 38781 1197986 ~ 1199095 (+)
G30698 NA other upstream 236663 995327 ~ 1001213 (+)
AMCG00019012 NA other upstream 493793 739226 ~ 744083 (+)
AMCG00018999 NA other upstream 680972 549516 ~ 556904 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other downstream 14656 1253366 ~ 1253735 (+)
AMCG00019033 NA other downstream 79912 1318622 ~ 1321493 (+)
AMCG00019046 NA other downstream 347115 1585825 ~ 1605545 (+)
AMCG00019064 NA other downstream 623119 1861829 ~ 1885551 (+)
G31110 NA other downstream 903120 2141830 ~ 2147563 (+)

Expression


Co-expression Network