G30887


Basic Information

Item Value
gene id G30887
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1310106 ~ 1310381 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU38650
ggcaatcagccctggctcacagtcagcttttccattcatcccataggtgggatggggttgaggtcagggctctgtgcaggccagtcaagttcttccacaccaatctcgaCAAACTATTTTTGcatggacctcactttgtgaCCAACAaaagactatttttatgcgctacatacttcagcactcaacagtcctGTTCTATGAGCTTGTATGGCTGACCACTtcgcggctgagctgttgttcCTAGATGTTttctcttaacaataacagcacttgtAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38650 True 276 lncRNA 0.47 1 1310106 1310381

Neighbor

gene id symbol gene type direction distance location
AMCG00019020 NA coding upstream 126202 1178120 ~ 1183904 (+)
AMCG00019021 NA coding upstream 195887 1098229 ~ 1114219 (+)
AMCG00019016 mafa,LOC107704507 coding upstream 448709 860483 ~ 861397 (+)
AMCG00019017 NA coding upstream 462779 837999 ~ 847327 (+)
AMCG00019013 NA coding upstream 529477 780393 ~ 780629 (+)
AMCG00019040 NA coding downstream 104229 1414610 ~ 1428982 (+)
AMCG00019041 NA coding downstream 243692 1554073 ~ 1557865 (+)
AMCG00019042 NA coding downstream 252642 1563023 ~ 1581623 (+)
AMCG00019050 NA coding downstream 318444 1628825 ~ 1641050 (+)
AMCG00019052 NA coding downstream 333986 1644367 ~ 1658275 (+)
G30878 NA non-coding upstream 53459 1256440 ~ 1256647 (+)
G30874 NA non-coding upstream 71396 1237876 ~ 1238710 (+)
G30869 NA non-coding upstream 81665 1226829 ~ 1228441 (+)
G30866 NA non-coding upstream 113904 1195932 ~ 1196202 (+)
G30857 NA non-coding upstream 122881 1186397 ~ 1187225 (+)
G30903 NA non-coding downstream 99090 1409471 ~ 1409958 (+)
G30910 NA non-coding downstream 105570 1415951 ~ 1416163 (+)
G30937 NA non-coding downstream 242263 1552644 ~ 1552862 (+)
G30939 NA non-coding downstream 270890 1581271 ~ 1581489 (+)
G30996 NA non-coding downstream 627439 1937820 ~ 1938218 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other upstream 56371 1253366 ~ 1253735 (+)
AMCG00019030 NA other upstream 72469 1213676 ~ 1237637 (+)
AMCG00019029 NA other upstream 111011 1197986 ~ 1199095 (+)
G30698 NA other upstream 308893 995327 ~ 1001213 (+)
AMCG00019012 NA other upstream 566023 739226 ~ 744083 (+)
AMCG00019033 NA other downstream 8241 1318622 ~ 1321493 (+)
AMCG00019046 NA other downstream 275444 1585825 ~ 1605545 (+)
AMCG00019064 NA other downstream 551448 1861829 ~ 1885551 (+)
G31110 NA other downstream 831449 2141830 ~ 2147563 (+)
AMCG00019089 NA other downstream 1209723 2520104 ~ 2618052 (+)

Expression


Co-expression Network