G31035


Basic Information

Item Value
gene id G31035
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1705899 ~ 1710543 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU38860
NttagttattaatggacaccaaacgagcacgatggggtggatgggctcctctcgattggacactgaattatgttctcatgttctaaTAGGAACCCATTGCCTCTTAAAGTCGATTGTCTTTATGAACGACAATGAACTACTTCAAAGCCACTCCCCACCtcaattgttttcaattatattcTATACATCTACAATAGCATGTAAAAATCCAAAACACGTACATTTCTCtccagttatttaaaacaatctattGCTGTTACTTATAGACGGCGACACACATGCAGAACAAAGCCCAGCTCTGCTGCTCTACTCCACTGTACTGTACGAACAGCGCAGACTCGGCGCTGCGCTTATATTTGATGCTGTACGACACCCTGCGCTGAGAGTCGAGGCCACGCCCCCAGAGTTCACACCGCCGGGCTTCGGCTTTGTACGGTGACCGCAAAGTGCTGATGGTCATTAGCAGTCCTATTacattaagtattattattcaaCATAGTGTATTGCTGTTGTCAATTATTAATGAATGGAAAAGTCCAGAAACAAGGGACAACAGGCAGGCAGGGGACGGCAGTAGTAAAGAGTGTACTTCTGTACAGTCAAGCTAACTCATCTATGATGTCATTTAGAAGGCCATTCTCCTGAAGCACCGGCACTTACTGCCATTCTGAGATGTTTTTAATGACTGATGTAGCTTGGGGCACAAGCACTATGCGCTCCGATACAGGGTAGTGTAggtatttcatttcatttcattttcacactgtGGCCAATACCTATAATGTGCAAGTCGCCAtcttataaaaacataagaaagtttacaaatggcCTCCTTTCATTCCTCCTGCATCGTTCGTGCAGCATTCTGTCCAGAGCTGCATGAACCGCTGAATAACCGTCCAACCCAGTTGTACGATTTGTCTTTGcaggtttgttgttgttgttgttgttgttgttgttgttgtttccccaAAGCAGGTTAACACAGTGCCAATGTGAATCATGCGCTTCCAACAGCGGGCTCGGCCAGACAGCGGTTCCCCAGCACTCACATAAAGTCAGGGCAGCTGCGTTAAAAGCAGCGCACAATTTAAAGGCACCCTCACAAGCACAGCATTCACAAGGGAGCTTTTTCAGCGTGAGTGTAGGATGGCATAGGCTGGCGCACAGCGAGACACAATTTCAGGATTGTCCTCTGTCGCTGTCACCATGGACTTTTTTCCTGAATGATGAATTCGTCACGTGTGCAACACAAGGTGCCGCTGTTGACAGATTATCAGCAAATATAACCAGATAGATTTTCTGACAGAAGCATCTCCCCTGACCCCGCTGGTCTTAGGGCAGCCGGCTGCGACCCTCGTCCCACAGCGTCTCCTGCTCTTGTTTTCTTGCTCTggctctcaatgacttaattggaTTAATCATTTCCAGAACTGGCACAAGATCATGTTTTCCAGGCCTTTACGCAGTGAGCATTTCCAACCCCCCATGGTTCGTCAGGGAAGGAGTTGCAGACACCCTGGTCTAAGGGgaaagtttcatttttatttatttttatttttatgaggggtgtgtgtgttggggggggttcTGGCCTGTCACATAAGACCCCCATTCATCCCTGGAGCTCTTGTTTGAGGAAGACTGGCCCAGGTCATGGATAGCAAGCGCATTAGACCTGCTGGTTTGAGtgtCTGGAGCTTGCCTTACATTTGCTGATGACATTAATATCCAGTGTGGGAGATTCTCCGTCCCTGCCTGCCAAGTAGGGCAAAGAGTGAATCCCAGATGACTTGGAATCGAGGAATGATTGTCATCGCACCAGATACGCAGCCAAGTCAGCATCGAAAACTCTGCTACCTGACTTGCGGAGCTCCGTCACACTCGGCCCACGGTGGACTTCCACTGCGGCTCCGCGGCACACCCTGCCTCCCTTCCCTTTCCCTTCCAGCACTGATCATACATCCCTCTGTCCAGAAACAATCGGCGCTCAGCTGTCTTGTGACCAGCAGCTGCCCTGCTGCGCCCACGGTGAGCCACACACAGAGACCGGTCTCTCCATTAAAGCATCAGAGATGTTTTACTAAATCAATAGTACACCGAGGACAcggagtattttatttttggtctcAATTCATAATGTGAAAATTTGTAAAGGTGTGAGGAAGTGAGTGAGGCTGAGGGAAAAGCAGGCGCATTCGTTTCCGTCCCTGTTCTGATATTCTATCCTAACCAGATCACCAATTGCTGGTCATGAAGACACTGAAATTGAATAGCAACCACTGTTAAAAAGTCTATGTGTGTTAATATATCAGAATGATACTGTctggaggggaggcagccaTTAGGTCTAGGCCTTAAAGTAAACCATGGACCCCTCAGAGGTTGATTTTCTCTTATAACAATCTGTCATCCATAGgactttgtatttttctctcctccgtgtctaaaggtttattttattgtttgtggtttatgtatttgtttaattttgtttgtctgttttcaatatgtaaagtgctctgtggctaacCTGCAAAGGGCACTGCACtgaataaaaat
>TU38861
ACGGCCATTACCGCACACCGACCGCCGGACTCTTCTTGCCCCCGTGTGCGGAGCTATAATATCGCCATGCAATTGAAGCCGCGGAATTGAAGGtgtCTGGAGCTTGCCTTACATTTGCTGATGACATTAATATCCAGTGTGGGAGATTCTCCGTCCCTGCCTGCCAAGTAGGGCAAAGAGTGAATCCCAGATGACTTGGAATCGAGGAATGATTGTCATCGCACCAGATACGCAGCCAAGTCAGCATCGAAAACTCTGCTACCTGACTTGCGGAGCTCCGTCACACTCGGCCCACGGTGGACTTCCACTGCGGCTCCGCGGCACACCCTGCCTCCCTTCCCTTTCCCTTCCAGCACTGATCATACATCCCTCTGTCCAGAAACAATCGGCGCTCAGCTGTCTTGTGACCAGCAGCTGCCCTGCTGCGCCCACGGTGAGCCACACACAGAGACCGGTCTCTCCATTAAAGCATCAGAGATGTTTTACTAAATCAATAGTACACCGAGGACAcggagtattttatttttggtctcAATTCATAATGTGAAAATTTGTAAAGGTGTGAGGAAGTGAGTGAGGCTGAGGGAAAAGCAGGCGCATTCGTTTCCGTCCCTGTTCTGATATTCTATCCTAACCAGATCACCAATTGCTGGTCATGAAGACACTGAAATTGAATAGCAACCACTGTTAAAAAGTCTATGTGTGTTAATATATCAGAATGATACTGTctggaggggaggcagccaTTAGGTCTAGGCCTTAAAGTAAACCATGGACCCCTCAGAGGTTGATTTTCTCTTATAACAATCTGTCATCCATAGgactttgtatttttctctcctccgtgtctaaaggtttattttattgtttgtggtttatgtatttgtttaattttgtttgtctgttttcaatatgtaaagtgctctgtggctaacCTGCAAAGGGCACTGCACtgaataaaaat

Function

GO: NA

KEGG:

id description
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU38860 True 2562 lncRNA 0.46 2 1705899 1708750
TU38861 False 964 TUCP 0.47 2 1705899 1710543

Neighbor

gene id symbol gene type direction distance location
AMCG00019055 NA coding downstream 5349 1685165 ~ 1700550 (-)
AMCG00019047 NA coding downstream 77777 1624468 ~ 1628122 (-)
AMCG00019048 NA coding downstream 88208 1616748 ~ 1617691 (-)
AMCG00019049 NA coding downstream 89198 1608998 ~ 1616701 (-)
AMCG00019043 NA coding downstream 173610 1509123 ~ 1532289 (-)
AMCG00019058 NA coding upstream 122928 1833471 ~ 1841486 (-)
AMCG00019067 NA coding upstream 228002 1938545 ~ 1957060 (-)
AMCG00019066 NA coding upstream 275562 1986105 ~ 2011157 (-)
AMCG00019065 NA coding upstream 309822 2020365 ~ 2030234 (-)
AMCG00019070 NA coding upstream 328156 2038699 ~ 2049084 (-)
G31018 NA non-coding downstream 115178 1589579 ~ 1590721 (-)
G30932 NA non-coding downstream 199982 1505564 ~ 1505917 (-)
G30900 NA non-coding downstream 347736 1357308 ~ 1358163 (-)
G30871 NA non-coding downstream 473334 1226830 ~ 1232565 (-)
G30823 NA non-coding downstream 652014 1051085 ~ 1053885 (-)
G31038 nrbp2,LOC108267406,LOC108413492 non-coding upstream 22042 1732585 ~ 1733587 (-)
G31064 klhl18,LOC107657445 non-coding upstream 138995 1849538 ~ 1851593 (-)
G31074 NA non-coding upstream 159828 1870371 ~ 1881183 (-)
G31075 NA non-coding upstream 162202 1872745 ~ 1874348 (-)
G31021 NA non-coding upstream 265161 1975704 ~ 2061961 (-)
AMCG00019034 NA other downstream 382303 1321614 ~ 1323596 (-)
AMCG00019031 LOC107567020,LOC106939174 other downstream 445262 1239711 ~ 1260637 (-)
AMCG00019024 NA other downstream 528333 1175031 ~ 1177566 (-)
G30849 NA other downstream 530916 1174524 ~ 1174983 (-)
AMCG00019007 LOC106613553,LOC108443229 other downstream 1071606 614398 ~ 634293 (-)
AMCG00019059 NA other upstream 171911 1882454 ~ 1896432 (-)
G31082 NA other upstream 221798 1932341 ~ 2083271 (-)
G31130 NA other upstream 467437 2177980 ~ 2178650 (-)
AMCG00019109 NA other upstream 2509900 4220443 ~ 4229991 (-)
AMCG00019129 NA other upstream 3221806 4932349 ~ 4940667 (-)

Expression


Co-expression Network