G31075


Basic Information

Item Value
gene id G31075
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1872745 ~ 1874348 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU38909
ACAATGTAGTGTACTGCGCAGGGTCCTCATCGCACACGTGTCATTTCTGGCACAAAAGGCCTTCAACTTGGTGTTGTTCACCGCCACGCAGTCCTGTCTGGAGCACAACACTGTGCTTAGACCTGTTATGCAGAGCATCACTATTGGAAAATAAGCCACTCCGGTGATATGAATATGAGGTTAGCGCCCCAGTGTCTGGGTCGGTCACTCAGTGAGGCAGCAGGTCACGCTAGAGGGTGTTTGGGGTGTGCTCTGCGTTGTGCTGGGTGTTGTGTCTTGTTTAGTCAGTCctctgtgtgctgtggtgtAAGGGAGCAGAACAGCCTTGACAATGAATGCCAgtgatgctttaaaaaaatataaataaatcaggtgAATAACTGTCCCAATAATATAAACCCAGTGCCAGTTCTGGCTTCTGTTCCACCCCGTTCTCAATGACTGAAGTGAGACAATAACTGGCTATATTGGACCGTTTTAAGCACAGTTTCCAGGTTGTGACTGAAGCAGGTGGGGGTGTATAGAGAGTGcctgcagccccccaggaccAGCGCTGCCCACCACTGCTTTACAGTGCGTCTGCACTAGGACTCAATTTCAATTCAACTCAACTcttgtgttctgtttttgttcgCCAAACCAGAGACGACCAACAGCGTTGTGTTCAGCTTGAGTCACTGCACTTGACAGCAGTGAGGAGCAGGCCAGCAGTGTGCAGGAGTGCATGGCCACACTACTGCAGCCGCAGGGACTGTACAGAGAATGTAAATGCGCTGCAGGAAAATCCTTGCTATCTTCTCTGTCTTATTAGGATCTCAGTGCCTCTCCtctttgctttggttttgaCAGGTTGATACATGTTATGGTTGTACAATTCTCTTGGAAGGCAACTCCAGCCAACCCAAAGAAGTGTGGAAGAGATTGGTGCAGAAATTGAAGATTGTCACTGACCCacagAATCGCACCAATCAGTCAGAGCCGTGTTCGAGCAGCGGAGGGAACGGCACCCGGGCCTGTGAACTGCAGAGACTCAATGGAACCGGACTCAATGAGACGGACCCACAGGTACCGAGACACGCCGACAGGGTGCCAACAACGAAATCAGTCAGATTAAAT

Function

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU38909 True 1116 lncRNA 0.50 2 1872745 1874348

Neighbor

gene id symbol gene type direction distance location
AMCG00019058 NA coding downstream 31259 1833471 ~ 1841486 (-)
AMCG00019055 NA coding downstream 172195 1685165 ~ 1700550 (-)
AMCG00019047 NA coding downstream 244623 1624468 ~ 1628122 (-)
AMCG00019048 NA coding downstream 255054 1616748 ~ 1617691 (-)
AMCG00019049 NA coding downstream 256044 1608998 ~ 1616701 (-)
AMCG00019067 NA coding upstream 64197 1938545 ~ 1957060 (-)
AMCG00019066 NA coding upstream 111757 1986105 ~ 2011157 (-)
AMCG00019065 NA coding upstream 146017 2020365 ~ 2030234 (-)
AMCG00019070 NA coding upstream 164351 2038699 ~ 2049084 (-)
AMCG00019069 NA coding upstream 222636 2096984 ~ 2098809 (-)
G31064 klhl18,LOC107657445 non-coding downstream 21152 1849538 ~ 1851593 (-)
G31038 nrbp2,LOC108267406,LOC108413492 non-coding downstream 139158 1732585 ~ 1733587 (-)
G31018 NA non-coding downstream 282024 1589579 ~ 1590721 (-)
G30932 NA non-coding downstream 366828 1505564 ~ 1505917 (-)
G30900 NA non-coding downstream 514582 1357308 ~ 1358163 (-)
G31021 NA non-coding upstream 101356 1975704 ~ 2061961 (-)
G31137 NA non-coding upstream 301814 2176162 ~ 2176966 (-)
G31218 NA non-coding upstream 530066 2404414 ~ 2409880 (-)
G31234 NA non-coding upstream 600336 2474684 ~ 2474983 (-)
G31236 NA non-coding upstream 605590 2479938 ~ 2480415 (-)
G31035 NA other downstream 162202 1705899 ~ 1710543 (-)
AMCG00019034 NA other downstream 549149 1321614 ~ 1323596 (-)
AMCG00019031 LOC107567020,LOC106939174 other downstream 612108 1239711 ~ 1260637 (-)
AMCG00019024 NA other downstream 695179 1175031 ~ 1177566 (-)
G30849 NA other downstream 697762 1174524 ~ 1174983 (-)
AMCG00019059 NA other upstream 8106 1882454 ~ 1896432 (-)
G31082 NA other upstream 57993 1932341 ~ 2083271 (-)
G31130 NA other upstream 303632 2177980 ~ 2178650 (-)
AMCG00019109 NA other upstream 2346095 4220443 ~ 4229991 (-)
AMCG00019129 NA other upstream 3058001 4932349 ~ 4940667 (-)

Expression


Co-expression Network