G33381 (ube2v2,LOC107732116)


Basic Information

Item Value
gene id G33381
gene name ube2v2,LOC107732116
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 15692482 ~ 15721452 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU41832
CTTATTCTCCTTAAATGTCCCAATCCTGCACCTGCAGATGTAATTCTTTATGTGTGGGTGGTAAGCATCGTGAAAATTTACAAGACATTTTAGGAGAATAAGGTTTAAGACAGAGGGTCATAAGAATCTATTAGAATTAATTGCTGTAGGTCTGTCCTTCTGGCGGCTGCGCAAGCTTCAAATTCTCTTTGGCCATCATTAGGCGCCGTAGCTCTTGAAGTACAACCTTAATGCTATAGGAATTTTGCCATTTAGCTAGAATTGGTATGCTACGAGAATCCACCGTCCCATTGGAATTATTTATTCCATTCATACTAATTTTTGTTACAAATCTAACAGTTGGTGGTAATTCTGGATATTGAGGTCCACACTCTACTTTGAGGCTGTATATTCTGTTTTCATAGTTAGTTCGTGCTGGTCCAATGATCATGCCTGTCCATCTTGTAAGCGTCATGTCTTCATCATCTTCAAGGCCCCAGCTGACAGTACCATCACCCACTCCTTTCTGTCCTTCTTCAAGCTCTTCCAACAAGCGGAAGTTACGAGGAACTTTAACTCCTTCAGAGCGAGCACGGATTTCCTGTGCGGGGCTGCGTTCCCATCCCTTCGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGCGGTTCATCTCGGCCATCCTTAGGTCGCTGGTTCGAATCCGGCTCGAAGGACATTTTGTTTCTGAGGTCGTTCGTTTCCCAGAACGTTTTGCTGTTCGATcgagagaaaaggaaacaacaacattcgaaatgtaaaatgtaatcattcGAGAAGAATATAGGAAACGAAGAAcaagtaaatgaataaacactGGAGAATGCGGGCATCGATCCCGCTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTAATTCCCCGTTTCTTGCTGTTGCCGAGGTTCTCATTATATTATTCAATAGTAGTCATCTGACAGCGTCACAATTAAGCAGCTGGGAATCGAACGCGGGTCCACCAAATTCTCCGGTTTAACGGATTGTTATTTGTTACTggcaacagaaatgtaaaactattttaattgaaatacttaacgtatataaatattgttagTGCATACGCTATATGCCGTCTtactaattaaaatcaaaattacGACATTGAATTTACGATGAGCTtcattttaagtaaattaatcaACAACAATGACAGCTACAACAAAATGTCCTTCGAGCCGGATTCGAACCAGCGACCTAAGGATGGCCGAGATGAACCGCTACAGTCCTCCGCTCTACCAACTGAGCTATCGAAG

Function

symbol description
ube2v2 Acts upstream of or within protein K63-linked ubiquitination. Predicted to be active in nucleus. Orthologous to human UBE2V2 (ubiquitin conjugating enzyme E2 V2).

NR:

description
ubiquitin-conjugating enzyme E2 variant 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41832 True 1293 TUCP 0.42 5 15692482 15721452

Neighbor

gene id symbol gene type direction distance location
AMCG00019348 NA coding downstream 11152 15632482 ~ 15681330 (-)
AMCG00019349 NA coding downstream 62481 15628489 ~ 15630001 (-)
AMCG00019343 NA coding downstream 141454 15533235 ~ 15551028 (-)
AMCG00019340 NA coding downstream 332414 15359700 ~ 15360068 (-)
AMCG00019341 NA coding downstream 333819 15358008 ~ 15358663 (-)
AMCG00019351 snai2 coding upstream 142335 15863787 ~ 15864856 (-)
AMCG00019352 NA coding upstream 266711 15988163 ~ 15988928 (-)
AMCG00019356 NA coding upstream 668925 16390377 ~ 16421282 (-)
AMCG00019355 pcmtd1,LOC107732114,LOC107717289 coding upstream 733288 16454740 ~ 16474345 (-)
AMCG00019357 NA coding upstream 786186 16507638 ~ 16552225 (-)
G33291 NA non-coding downstream 436459 15254032 ~ 15256023 (-)
G33285 NA non-coding downstream 507945 15182780 ~ 15184537 (-)
G33282 NA non-coding downstream 530515 15161712 ~ 15161967 (-)
G33268 NA non-coding downstream 630131 15061774 ~ 15062351 (-)
G33206 NA non-coding downstream 974249 14714791 ~ 14718233 (-)
G33393 NA non-coding upstream 136725 15858177 ~ 15931208 (-)
G33419 NA non-coding upstream 550615 16272067 ~ 16311866 (-)
G33461 NA non-coding upstream 896850 16618302 ~ 16618691 (-)
G33531 NA non-coding upstream 1322566 17044018 ~ 17044239 (-)
G33532 rgs19,rgs20,LOC103135694 non-coding upstream 1328062 17049514 ~ 17049746 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 700486 14951842 ~ 14991996 (-)
G33163 NA other downstream 1134192 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 2027252 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 2504190 13168436 ~ 13188292 (-)
AMCG00019284 NA other downstream 3269162 12413154 ~ 12423320 (-)
AMCG00019396 NA other upstream 2663415 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 3573360 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 3720943 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 5022078 20743530 ~ 20765496 (-)
AMCG00019487 NA other upstream 6949195 22670647 ~ 22744182 (-)

Expression


Co-expression Network