AMCG00019890 (LOC107731024,LOC108423692,LOC107665022,LOC108255392,LOC107595531)


Basic Information

Item Value
gene id AMCG00019890
gene name LOC107731024,LOC108423692,LOC107665022,LOC108255392,LOC107595531
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2160178 ~ 2185195 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019890
ATGTTCTTTTGGAGAATGAGGAAAGAAGTGTGGTTCTGCCCACAGAGCATGCTGACCGGGCTGATGTACCATCGCCCCGAGGACCCCCTAACGTATCTTGAAAACTGCCTGCAGAAAGCGCGGGAGCTGGGGGGCCCGGAGAGAGTGCGCTGGGACACCTTCATCACTCCCGATCGCCGGCCCTTGCCACCCATCAACGGGGGCCAAGGCAAGAAAGCTGCCTTCAGACCAGATCCTGGCCCTGGCCCCGGCCCTGGCCCGGTTCCATACAGACGCTATGAACGCCTGCCCCCCATCCAAGCACAATACTCCATCGAGAGCGACTCTGACATGACAGAATCGTCCGGGCTAATCCAGGAGTACGATGTTTTCGACCCTGCCAAGCCCCGTCCCCACATCATCTTTATCATTGGTGGGCCAGGCAGTGGAAAAGGCACCCAGACGGCCAAAATGGCAAGCCACTATGGCTACGTGTGCGTCTCTGTCGGGGAGATCCTACGTAACCAGCTACTGCATCACGCCCCCAGTGACAGGAAGTGGGAGTTGATTGCACAGATCATAGCCAACGGGGAGCTGGCACCACAGGAGACGACCATAGAGGAGCTGAAGCACCAGTTCATCAAGCAGCAGGACGCCAAGGGGTTCATCGTTGATGGCTTTCCACGAGAGATATCCCAGGCCTTCACCTTCGAAGAGCAGATTGGCTCCCCTGACTTGGTGGTGCTGCTCGCCTGCTCCAATCAGCAGCTGCGCCAGCGCCTGGAGAAGAGGGCCACCCAGCAAGGCCGGCCAGATGACAACGCCCACGCCATCGAGAGGAGGCTGGACACCTTCAAACAGAACATCAGCCTCATCGCCAAGTACTACCAGGAGAGGGCTCTCATCGTGAAGATTGACGCCGATCGCGAGGAGGACGATATTTTCGCAGACATCAGCGCCGCGGTTCAGGAGAGACTTTTTCCCAAAGGCCTGCAGGTGGAAGTTTACACTGACCCTGATTTCCTTCAGGAAGAGGACGAAGATCAAGTGCCCTTCAGCGCCAGCGGGGAGGTCGAGGGATATTTCTTCACAGAACCGATCACCATGTCAGATAAACTGAAAGGTAGCAAGATCATCTTCGTCGTGGGCGGACCCGGCTCCGGCAAGGGCACCCAGTGCGAGAAGATCGTGGCCAAGTATGGCTACACCCACCTGTCCACCGGGGACCTCCTCAGGGCAGAGGTCGGCTCAGGGTCGGAGAGAGGCAAGAAGCTGTCTGCCATCATGGAGAAGGGAGAACTCGTGCCCCTGGACACCGTTCTGGACATGCTGAAAGATGCCATGATCGCCAAGGCTGACGTGTCGAAGGGTTTCCTGATTGACGGCTACCCTCGCGAGGTCAAACAGGGAGAGGAGTTTGAGAAGAAGATTGGTGCTCCCACCCTGCTGCTGTACATAGACGCCGGCGCAGACACCATGGTGAAGAGGCTGCTGAAGCGCGGTGAGACCAGCGGGCGCGTGGACGACAACGAGGAGACCATCAAGAAGCGCCTGAACACTTACTACAAAGCCACCGAGCCCGTCATCGCCTTCTATGAGGGCCGCGGCATCGTCAGGAAGATCAACGCCGAAGGCAGCGTGGACGACGTCTTTGGCCAGGTGGCCAGCGCTCTTGACGCCTTAAAGTAAACCCAGACTGCTGCAAGAGATCTccctcttctgttttttttttttcttcccctcattTTGCCGATTCAAACTCAGTTCAGCAACAGACCCTCAAGGGACAATCTGCCTTACTGTGTGTCCCACTCCAACGCACCCTTCATTCCCAACTCCCGACATGTCTGTGCATTTCATCCGCCTGGAACGATCCCAACGAGGACGCTCATATGCacgtttgtttttgtaaattattttcctttatttttatttttttttaataccgtTGAACttgaattataaattatttgaccttcttaaaaaaatatgaatgtacatttcaatttggaaatactttatttctctctttagTATAGAGCTCTGGTGCActttgtctgtgtctttgtttcGATCGCAAGGCCACCTGAGCCAGCAGCTGATCACGTCCACCTGAAATGGaagtttctttatatttctccACATTTCCTGCCTCCTTTTCCTCACTGTCTCTTCTCATCGCGGTGTCTTTTGGGTCTCTCTGACCGCCCACCCTGTTCTGTTGTCATTAAATATCACCTTCAACTCTGACCAAACACCCACAGCTCCTGGCctgtttattgaaatataatttgaggGAAATGTAGGATTGAGATGGGTCTGTAAAAGCAGCCACGACTAGCCTTAAATATCGGTGCTTGGTGTTGTACTTACTCATAGTTTGACAAGTGTGAGGAGACCAGTAGTACAACCATTGTAATCTGTTATATAGCTATGCCTTGAGTGGCACTTCTTCTAAATGGAATACTGTACAAGCAGTCCATTTAGTGGGGGAGTTATATTCTATCATTTAAATCCTATATTTTCTCATGCATTAACCATTGCAGACCCCTATGAGCTTCTGCGATCTGTCCCTTCCCAACATCTCCTCTTCCTTCATTAATGAATGCCTAGAAAAGTGGTATTCAAGAAAAAGGTTTCAACAGGTCCACGACACAACCACTGCAACCCACTGGCTGACGACCCTGCATGAAAATGGCATCGACACACTTTCACAGCCACCATCAGCTAAAGGGAGATGAATGGATGATGCCAAAATTGGAAATATACTTCCTGATTATATGTGGAGAACAAATCTCCTTTTCTCTGAGGTGACACATCCCATGCAGTCCTAGTGCACAAGGATAGATTGTGCAACACAACCTCTGACACAGCACAAAACATTATTGATATACAATGTACATAAGAACACACAAGACAAGGTTTTCTACCCCTACACTGAGTGACACACCTCCTCCAAGGAGGATAGACTTAAACTAATGCACTCATAAAGGAACTAAAGTTATTTCTACATGTGTCATAAGCTGAGACATCTGTGATGTGCTTGTCAAGCATTTCCAAGTCATTCGCAGCAATGAAATCATTGCCTTGTTCATGGGAATGATCTAAAACATGTGATCTAGTGTTAGGTCTTTCATTGTGTCACTATTACTGTGATACAGATTACAGGTATGTTGTCGTGTTGTGCCTTACTAACACATGTACTTACACATGTGAAGTGAGTCCATATAACCACACTGTCCTGGCACTGCCTTTTAAGTGGCACAAGTAAACAGCTTTgggggacaaaaaacaaacaatacaaactaCAATTTGTAATGTACTCTCACTTGATAATGAAGGTAAGTTTGATGAATAACTGACATTGTGAATCTGTGGCTTTCGTGATGCAAAACtcacagcaaaacaacaaccttCCTGGTTGTATCCTTTTTAATATTCATCTTACTCATCTTTACCTTAAAAAAGAAATCGCCACCATCTTATCTCCTTTCCAAAATGACTGTGCTCTGCTGGGAAACAGATTGGTACTCGCTGACAAATACAGCAACTCATCAAACCCAGGTCCCAAAAATCAGCGTTGGTTTCTCTGATCAGCTGTTCCTACATTATTTACTATCGCCAGTCTCCCTGTGAGTAATCGGTGTCATGCATGGGTAATACTGTTGAGCCAAGCAAAGAAATGTACACGTATGATATTTAATGGCCATAATAAAACATTCTCTGCCCATCTGTAGTGAACAGGACTCCTAACGGGGAATGTAACATGTACAGCAGATTAACTCAGTGATCAGGAATATCAGTCAGAAGAAATGTTTCTGTCCATGATGATCTGTACCTTTTCTTTGCGTAACCTGTTGTCCTTTTTGTAATggagattcatttttaaagatacaaacattttatgtaCCGTAAATGTtgtaaaagaaatgtataattatatacgaaatgtaatatatatatacatatatataaactaaaagaaaataaataattggaaaaatTGA

Function

NR:

description
PREDICTED: adenylate kinase isoenzyme 5-like

GO:

id name namespace
GO:0016740 transferase activity molecular_function

KEGG:

id description
K00939 adk, AK; adenylate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019890 True 3986 mRNA 0.47 14 2160178 2185195

Neighbor

gene id symbol gene type direction distance location
AMCG00019889 NA coding downstream 24239 2105830 ~ 2135939 (-)
AMCG00019888 brinp1,LOC107597955,LOC106563266 coding downstream 239423 1913441 ~ 1920755 (-)
AMCG00019887 brinp1 coding downstream 270309 1874560 ~ 1889869 (-)
AMCG00019883 NA coding downstream 1214289 944898 ~ 945889 (-)
AMCG00019882 NA coding downstream 1289282 869061 ~ 870896 (-)
AMCG00019891 gpsm1,LOC106910217 coding upstream 26482 2211677 ~ 2212773 (-)
AMCG00019892 gpsm1,LOC106563264 coding upstream 41609 2226804 ~ 2247160 (-)
AMCG00019899 NA coding upstream 278441 2463636 ~ 2479709 (-)
AMCG00019913 NA coding upstream 504707 2689902 ~ 2690317 (-)
AMCG00019914 NA coding upstream 520134 2705329 ~ 2705778 (-)
G59414 NA non-coding downstream 497999 1605102 ~ 1662179 (-)
G59403 NA non-coding downstream 666205 1493686 ~ 1493973 (-)
G59396 NA non-coding downstream 762953 1389345 ~ 1397225 (-)
G59395 NA non-coding downstream 812699 1347246 ~ 1347479 (-)
G59390 NA non-coding downstream 875433 1284425 ~ 1284745 (-)
G59484 NA non-coding upstream 7139 2192334 ~ 2192547 (-)
G59485 NA non-coding upstream 10608 2195803 ~ 2221194 (-)
G59556 NA non-coding upstream 389609 2574804 ~ 2575670 (-)
G59810 NA non-coding upstream 1305523 3490718 ~ 3491049 (-)
G59825 ttll11,LOC107579646 non-coding upstream 1412010 3597205 ~ 3597760 (-)
G59408 LOC107374630,LOC108230875,LOC104924185,LOC105913012,LOC101063574 other downstream 574178 1584919 ~ 1586000 (-)
AMCG00019880 NA other downstream 1587351 535831 ~ 572827 (-)
G59505 NA other upstream 139093 2324288 ~ 2327415 (-)
G59530 NA other upstream 269716 2454911 ~ 2480799 (-)
G59545 NA other upstream 309704 2494899 ~ 2507020 (-)
G59712 NA other upstream 846661 3031856 ~ 3034335 (-)
G59720 NA other upstream 922606 3107801 ~ 3111347 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031705 ak1 coding NC_007116.7 CM002889.2 71699893 ~ 71722257 (-)
grasscarp (Ctenopharyngodon idella) CI01139513_00000479_00000845 AK1 coding CI01139513 null 246 ~ 845 (-)