AMCG00020183


Basic Information

Item Value
gene id AMCG00020183
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12658313 ~ 12664512 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020183
CGCTAAGGAAGTGAGCGGGGAACGGGGTTTTAAGTCGATAACCTCAggacatataaatatatgcacgtatttattttatttgatgtatttactTACATAAAGTGAATTAACCCAGACAAGCTCCCGGAAGCCCCGGGTACAACAGGGGGCCAGGAGATCATGGCTCTGTTGTTACGGGTGCAGTTCTCATGAGGTTGGCAGTGTTGGATGCATTGATTTGCTCCCAGGAGGAAGAGAGTAGCAGCACGACACACGCGTTATGAGAGGGGGCAGGATCAGAAGCTGGTTTGCTGGGTGTCTGCAGGATCTCTGGGCCGGTGTCGGTTTGTGAGTGGCCGAGATGAGAAGTGGAGTCAGGGGTTGATCTGGGGAGCAGCGGTTGGGGGTTTTACTAGCCTGAGCTCCAGGGGTGCATTGGTTCCTGTGCCTCCCATGCTGCACAGGAATGGGGAAGCTCCAGAGCAAATACAGATGCCGTTCGTCTGTGTACAGGGCAGTGACACGGGAAGAGGAGCCCCCTCCCACTCAGCAGGTGCTGCAGTACAGCCCCGCCCACACCGATATGGTCAACTCAGTGGCGCCTCTGAACTCTGACCTCTGTGTATCAGGAGGAGGTGATAAGCAGTTGGGCCCAAGCTGTGGCCCGGTGCAGCATGGGTCCACGACAGGAAATAGCCGAGGAGGGTCACCTCAGGGCGATGTCTCTTCTCTCCCCCAGGCAGTGGTGGTGTACGACTGGAGGATGGGCAAGCTGCAGCACAGGTTTCCAGGGCATCAGCGGGAGGTGACCAAGGTGGGCTGCCAGTATGGCTCCAGCAGACTGTTCAGCGCCTCCCGGGACCTGACTGTCCTGATGTGGGACCTGCATGGAGGGGACCAGCCTGTGCAAGAGTTCTGTGGGCACGACCTAGTGGTCAGTGGCCTGGCGGTCAGTCCAGATGGGTCCCAGCTCTGCACAGGGTCCCGGGACAACGCCCTGTGCCTGTGGGACGTGGAGTCAGGGGAGTGCCTGCTGAAGAATGCGATCTCCAGGAACCTGGTGACTCACCTATGCTGGGTGCCAGGAGGCTCTTGCGTCGTGCAGACATCAGAGGATAAGATGGTCAGCCACGGCTTTGGAGGACAGGGGTGTGAGGCCACACTGTGGGACTTGCGACAAACTGGCAGCAAGGTGTGCGAGTACAGGGGTCACCTGCAGTCCGCCACCTCCTGCCTCTTCCTGCCGCCTTCCCCGGGCAGCGCCCCAACCCTGGCCACCTCATCCCAAGACTGCTCTGTCAGGATCTGGGACCAGAACTCAGCAGGTTATGCCGGGCACCTGCTATGTGCCAGCTTCAACACGGGGATCCACCTGCTAAGTCTGCAGCTTGACCTGGCCCGCCTCTGCGAGACCGCACGCTTCTAA

Function

GO: NA

KEGG:

id description
K24743 WDR31; WD repeat-containing protein 31

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020183 True 1405 mRNA 0.59 10 12658313 12664512

Neighbor

gene id symbol gene type direction distance location
AMCG00020186 NA coding downstream 11666 12641707 ~ 12646647 (-)
AMCG00020184 NA coding downstream 38499 12618600 ~ 12619814 (-)
AMCG00020185 NA coding downstream 60079 12597659 ~ 12598234 (-)
AMCG00020178 NA coding downstream 95329 12550570 ~ 12562984 (-)
AMCG00020179 NA coding downstream 128720 12516806 ~ 12529593 (-)
AMCG00020188 NA coding upstream 89345 12753857 ~ 12759226 (-)
AMCG00020190 NA coding upstream 97897 12762409 ~ 12766384 (-)
AMCG00020189 NA coding upstream 102153 12766665 ~ 12776416 (-)
AMCG00020193 LOC100195200,LOC107681237,LOC107715755,LOC107709843 coding upstream 117811 12782323 ~ 12790560 (-)
AMCG00020196 NA coding upstream 144962 12809474 ~ 12810528 (-)
G61488 NA non-coding downstream 74565 12578671 ~ 12583748 (-)
G61477 NA non-coding downstream 158887 12493801 ~ 12499426 (-)
G61470 NA non-coding downstream 206520 12430802 ~ 12451793 (-)
G61424 NA non-coding downstream 263285 12394285 ~ 12395028 (-)
G61302 NA non-coding downstream 730449 11925564 ~ 11927864 (-)
G61550 NA non-coding upstream 54855 12719367 ~ 12743437 (-)
G61558 NA non-coding upstream 140158 12804670 ~ 12805433 (-)
G61593 NA non-coding upstream 342910 13007422 ~ 13007666 (-)
G61696 NA non-coding upstream 672504 13337016 ~ 13338101 (-)
G61729 NA non-coding upstream 782490 13447002 ~ 13450062 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 148376 12484369 ~ 12509937 (-)
AMCG00020159 NA other downstream 606102 12001700 ~ 12052211 (-)
G61269 NA other downstream 956668 11695691 ~ 11701645 (-)
G61170 NA other downstream 1901894 10755468 ~ 10756419 (-)
G60746 NA other downstream 3818368 8839211 ~ 8839945 (-)
G61589 NA other upstream 333326 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 552484 13216996 ~ 13224512 (-)
AMCG00020230 NA other upstream 931006 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 999564 13664076 ~ 13665592 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 1140508 13805020 ~ 13808333 (-)

Expression


Co-expression Network