AMCG00020188


Basic Information

Item Value
gene id AMCG00020188
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12753857 ~ 12759226 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020188
ctgtaagTGGACAGGTTAGTGGGAGGCGAGGCATCCCTGCGGGAGGGGGGGCATGTGGGGCACTTACACTCCTCTTCAGTGTCTCTGCCCCAGCAGTCAGATAGCTgctgcagacacacagtgaAGATGATGGCTCCTCTTGTCCTCTTCCTCTTGTCCGCCTGGCTGGCCCTAGCCTGGGGGGGGCCCTTGCCTGACCGTCCCGAGATCCAGGTGCAGGAGAACTTCGACATGGACAGGTTCCTGGGGAAGTGGTATGACATCGCTCTGGCCTCCTCCTGCCCCTGGGCCACTGATGACTTCAGCCAGATAGCCATGACCACGACCTCCATCAGaCACGGTGTGTGCAAACAAGTCTCGGGCTTCTACAAGACGGACGCCCCTGGACGCTTCACCTACCACAACGCCAAGTGGAACATGGATGTGGACTCCTATGTCGTCCACACGAACTATGACGAGTACGCCATCGTGATAATGTTCAAAATGAATTCAGGAAAGAACTCTTCCACCACTGTCCGACTGTACGGACGCACCCAGGAACTGCGCCCCAGCCTAATCACAGATTTCACCCAGATTGCCAGGGATTTAGGCATCCAGGAAGACAGCATCATTACTTTACCCAAGAAAGACGAGTGTGTTCCTGGAGAGCAGGTGGAGGAGCCAGTGGTCAAGaGAGTGCAGAGGGAGACGGTCCTGGAACCCACAGAAGGATCAGGAGATGACACCACCATGTTCCGAAATTCAGACTCGTGTAACCTGTCTCCGGATGCGGGGCCGTGTTTCGGCTACATCCCGAGGTTCTTCTACAACTCCTCCCAGATGGCGTGTCACATATTCACCTACGGGGGCTGCATGGGCAACGGGAACTCTTTTGTGACAGAGAAGGAGTACGTGGGCCCCTGCTCTGCCAGCAATGACCTGTGGGCATTCGACTCCCAGATTGGCAAGTGCGTGGCCTTCAAGTACGGCGGCTGCCAGGGCAATGGCAACAAGTTCTACAGTCAGAAGGAGTGCGAGGAGTACTGCGGCGTGATGAAGGATGgtgaTGATGAGCTCTTGGGTCTCCCTGGAAAGAACTGAGCGAGGGACCCCTCAGCCTGTCCACCCTGTCTtgctcacactcacacatgcacccCTGTCAGGTtgctacaaataaataaacaacttggAAATAC

Function

GO: NA

KEGG:

id description
K23620 AMBP; protein AMBP

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020188 True 1175 mRNA 0.56 11 12753857 12759226

Neighbor

gene id symbol gene type direction distance location
AMCG00020183 NA coding downstream 89345 12658313 ~ 12664512 (-)
AMCG00020186 NA coding downstream 107210 12641707 ~ 12646647 (-)
AMCG00020184 NA coding downstream 134043 12618600 ~ 12619814 (-)
AMCG00020185 NA coding downstream 155623 12597659 ~ 12598234 (-)
AMCG00020178 NA coding downstream 190873 12550570 ~ 12562984 (-)
AMCG00020190 NA coding upstream 3183 12762409 ~ 12766384 (-)
AMCG00020189 NA coding upstream 7439 12766665 ~ 12776416 (-)
AMCG00020193 LOC100195200,LOC107681237,LOC107715755,LOC107709843 coding upstream 23097 12782323 ~ 12790560 (-)
AMCG00020196 NA coding upstream 50248 12809474 ~ 12810528 (-)
AMCG00020195 NA coding upstream 51437 12810663 ~ 12813210 (-)
G61550 NA non-coding downstream 10420 12719367 ~ 12743437 (-)
G61488 NA non-coding downstream 170109 12578671 ~ 12583748 (-)
G61477 NA non-coding downstream 254431 12493801 ~ 12499426 (-)
G61470 NA non-coding downstream 302064 12430802 ~ 12451793 (-)
G61424 NA non-coding downstream 358829 12394285 ~ 12395028 (-)
G61558 NA non-coding upstream 45444 12804670 ~ 12805433 (-)
G61593 NA non-coding upstream 248196 13007422 ~ 13007666 (-)
G61696 NA non-coding upstream 577790 13337016 ~ 13338101 (-)
G61729 NA non-coding upstream 687776 13447002 ~ 13450062 (-)
G61803 NA non-coding upstream 819183 13578409 ~ 13653379 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 243920 12484369 ~ 12509937 (-)
AMCG00020159 NA other downstream 701646 12001700 ~ 12052211 (-)
G61269 NA other downstream 1052212 11695691 ~ 11701645 (-)
G61170 NA other downstream 1997438 10755468 ~ 10756419 (-)
G60746 NA other downstream 3913912 8839211 ~ 8839945 (-)
G61589 NA other upstream 238612 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 457770 13216996 ~ 13224512 (-)
AMCG00020230 NA other upstream 836292 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 904850 13664076 ~ 13665592 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 1045794 13805020 ~ 13808333 (-)

Expression


Co-expression Network