AMCG00020195


Basic Information

Item Value
gene id AMCG00020195
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12810663 ~ 12813210 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020195
ATGGAACCCAGGGCACCAAGCAGCGAGGCAGGGAGGACCCTGCAGTGTGACACGCACTGCCCACGGCTGCTGGAGGGAGTGAGCGGCCTGAGGCAGCAGGGGGTGCTGTGCGACGTCACGCTGCGGGCGGAGGGAGAGGAGTTCCCAGCGCACAGGGTCATCCTGGCCTCCGTGAGCAGCTACTGCCGGGTCCTGTTCAAGGGGGCTGGTGTGACCCCTCCGACCCTTGTGACACCCCCGGGGCCTGCGGTAGTGCAGCTGAAGGAAGTGAGCTCTGGGGGTCTGCGGCGGGTGCTGGACTTCATCTACACAGGGAGGCTGGAGCTGGGCCTGGCCTGGCTGGAGGAGACACTGAAGGCCGCCCAAGTGCTGCTGGTGCGCGACGCCGTCAAGCTGTGCCTCCGCTTCCTGGACGAGAGCCTGGCACCCGAGACCTGCCTGGCAGTGCTGGCCATCGCTCGCAGGTCCGGGCCCGAGGAGCTGCGCAGGAAAGCACTGGGGCTGTACGTGCAGAGCTGCCACCGCACGCTGCCACAGGACCGCGAGCTGCTGCTCCGCCTGGACGTGGAGACCCTGCAGGAGATCCTGGAGCAGGGGGAGGTCAGGGGCGGCGGTGGCGGCGAGCTGGAGCTGTTCCGTTGTGTGGAGCGCTGGCTGCTGCACGACCACAGCCGGGCAGCGAGCGCCGGAGAGCTGCTGGCACACATCCGCTTCCCCCTCATCCCCGCGGCTGACCTGCAGCGGGAGGTGCAGGCGAGCCCGCTGGTCAGGACAGACTCGCGCTGCTTCCGGCTGCTGCAGGAGGCGCTGGCGTACCACTCCCAGCCTTATGCCCAGCCTGCCCTGCAAAGCCCCAGCACGCAGGTGCGCTGTGGCCAGAACAGCCTGCTGGTGCTGGGGGGCAGGACAGATGGTAACCGGGTGAGCCAGGAGATGTGGGTAGCAGACCACGAGTGTGCCGACTGGAGGAGACTGGGGGAGCTGCGCAACCCTGTCTACAACCACTGCGCCGCCGTCCTGGGCAGCTTCCTGTTCATCCTGGGAGGCCAGCACAGGTTCGACCCGGCAGGGAACCAGCCGACCAATGAGGTGTTCAGGTACGACCCCAGGGACGGGTCCTGGCTGCAGGTGGCCGGAATGTTGGAGAAGAGGACCCGTTTCCATGCGGACGTGCTTGGGGGCCAGCTGGTCGCCGTGGCAGGCGGGACTCTACTGGGGAAGCTGACGGACACTGTGGAGGAGTACCGGCCCACAGAGAACCGCTGGGAGTACAGCGCCCCCTACCCTTTGCCTGTGGCAGACCACGCAGGGGCCACACACAAGGGCATCCTCTACATCGCAGgcaaacagacacactga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020195 True 1359 mRNA 0.67 2 12810663 12813210

Neighbor

gene id symbol gene type direction distance location
AMCG00020196 NA coding downstream 135 12809474 ~ 12810528 (-)
AMCG00020193 LOC100195200,LOC107681237,LOC107715755,LOC107709843 coding downstream 20103 12782323 ~ 12790560 (-)
AMCG00020189 NA coding downstream 34247 12766665 ~ 12776416 (-)
AMCG00020190 NA coding downstream 44279 12762409 ~ 12766384 (-)
AMCG00020188 NA coding downstream 51437 12753857 ~ 12759226 (-)
AMCG00020194 NA coding upstream 5720 12818930 ~ 12827022 (-)
AMCG00020198 NA coding upstream 67454 12880664 ~ 12887861 (-)
AMCG00020197 NA coding upstream 76431 12889641 ~ 12898257 (-)
AMCG00020200 LOC106585428 coding upstream 116575 12929785 ~ 13017709 (-)
AMCG00020201 LOC107681248,LOC107560222,LOC107587427,LOC107690670,LOC107757972 coding upstream 216459 13029669 ~ 13033709 (-)
G61558 NA non-coding downstream 5230 12804670 ~ 12805433 (-)
G61550 NA non-coding downstream 67226 12719367 ~ 12743437 (-)
G61488 NA non-coding downstream 226915 12578671 ~ 12583748 (-)
G61477 NA non-coding downstream 311237 12493801 ~ 12499426 (-)
G61470 NA non-coding downstream 358870 12430802 ~ 12451793 (-)
G61593 NA non-coding upstream 194212 13007422 ~ 13007666 (-)
G61696 NA non-coding upstream 523806 13337016 ~ 13338101 (-)
G61729 NA non-coding upstream 633792 13447002 ~ 13450062 (-)
G61803 NA non-coding upstream 765199 13578409 ~ 13653379 (-)
G61872 NA non-coding upstream 937874 13751084 ~ 13751298 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 300726 12484369 ~ 12509937 (-)
AMCG00020159 NA other downstream 758452 12001700 ~ 12052211 (-)
G61269 NA other downstream 1109018 11695691 ~ 11701645 (-)
G61170 NA other downstream 2054244 10755468 ~ 10756419 (-)
G60746 NA other downstream 3970718 8839211 ~ 8839945 (-)
G61589 NA other upstream 184628 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 403786 13216996 ~ 13224512 (-)
AMCG00020230 NA other upstream 782308 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 850866 13664076 ~ 13665592 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 991810 13805020 ~ 13808333 (-)

Expression


Co-expression Network