G64823


Basic Information

Item Value
gene id G64823
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 28328980 ~ 28415277 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU81084
GACcatttcaagatttttttttttattgagttttaattaacaaaacaaagacaattaaaagctctaaaacaaacatacagagggaaataaactttaaaaccGAACTACAAATATATTCTGTTACAGCAAAACTAGCCTGCTCCAAAGCTAGCTCTAGTTAATAGATGAGGCTGCAAAATCAATGTAGTACCCTGTACATTTTGGTTGAGTAAATTCTTGCCATTAATCATACGTATGAAATGCCACAGTCTGAGGCCACCAAGATGTATAGCTTTAAAGCTACTGAAAGTTGCTTCCTTTAATGTTACAATAGAGGTCTTGGTTCTTGGGTACTTcaagaactggaaaaaaaaatgcaaactgcactgtattgaaaataaaataaaacacagaccaACATATTGAACAACTGTTTATTCTTAGCATTGAATAAAAACCTCACTGTATGGCGAGGCACACTGAAAGTACACCATGCTGTTAAATTGCTCAAGTTGTGAACACCAAAACATCTGGCTATTATTCCAGAGGTTAAGAAGGAGtaactaatataattaaacctTCACAGCATACAGCATTTTggtattatgtacattttttttcctttcttaaatTCGCATGGGAAATTTCAGTAATATAGTTattgcaacacattacaggaaCTGCCTCTTCTcaagaaatgaacaaaaacgAGAGTCCAAGTTGTTCAGTGTCATGATTTTGTGGCTTCTCACAAGGCATGGTTATCATGCAGTGTTCTGTGTATTCACTACAAGCTCCAGTCAAACTGTACATTAAACTATTGGACATTGCTCTTATTACTAGCTGCCCTATTTGTCCCCTCTTACCTAGAAGAGGTTTTCCTTGTAGTGCTTTAAATAACCTattgatattttcttttctaaatgaattttattaattaaatatttttttccttccagtgAGCAGCCAACCACAATACATTTATCCCCAGTACAGAGCCAACTTTGAGGACAATGTGAAATGAGACCAATAAAATcgattcctttattttttttaaatctttggaTCCCTTTTTTAACCCAACGGCCTTTGTAAACtacaaaatcatattaaaatatataatcacttAAGAACTCAGTTACTAGACATAGCACTTCAGAGGACAGTGCTTGATTCAATTTcaccaaaaaattaaaatgggcACCTGCAAATATAAAGGGGACTTTTCCTGTAGAGAACAACAGATCTATGTAGTATGTGTACAGTATGTAAAATTGTAACAAAGACAAAATCACAAAAggtttgtatcattttataAGACATGACAAATATGAAGTCCTGTTATGCAGCATTTTCCGATCCCATGGGAAAAAAAGCTTCCAactaaatttgtttttaaagttagaGACTTTTTATAAAGTCTGACCTATCCTTATTTGGGGAAAATCCTGTATTGTACCACAGTCTCCCCTCTATGTACAAAAGGGGCAAGTGCACAAAATCTGGCTAAATGAGAGCTGTGGTATCCGTTCACCTGTGTTAACTATTAATACTTACTAGAAGTGAACTTTAGGAAGCAATACCAACTACTGGAACCTTtacatattaacattaaaaccTAAAGCCTTAAATGCAATGCGTGTGTTGAACTGCAGCTCCCAAGGCCCATTCACAAAGGATACTACAGGTAGTGCAGGACACAATTAGCACCGGCTTTATTCCTTAATCATCTCTTCAagatgtaaatacaaaataatgcttAGGGAATTCAGCACTCTACAACATGGCAGTCAGTTTAATAAATCAGTACTATTCTTTAAAGTgcaattgaatacatttcagctAGACGTTCTTAGTTCCTTTTCTTCTAGAAACTCAAAGATGCTGCAGTTCAAGCAATGTTATGGGTTTTATCAACTTTTTCACTTCCGTCTCTCCCTTACAGTTTCTTAAACAAAAGATTTTGACTTAAGTACTATCGAAGCACTGCTGGTAATGTGACCAGATGCATCATGCACTATTCAATCTCAAGTCTATATCCTTCCACATCTGAAATGATTCCACTTTTCACAAAAGCCATTCATCATGCCTGTTCTCTTACCGGATCTCTACTGGATCAGCATGTACTTGATAACGCTCACATTTCTACAACGTGTGTAACAGATTTCCAAATTTTCTAAATCAGAATTAAAAACTCATGAggcaagtttaaaaaataataataaatcaaaaaagCATGTAGCCTTCTTGGAATAAACCTAGTTGGGGTTGGGGTGCAGATTTCAGGACTAGTTACAGATGGGTGAAAACTTTAacaaaccaccaccaccaccaccaccacacaccaCTGCTATTGGCACTATTAGGCTTTAGTTATCAAAAACATACTACTGCTTCAAACCACCTGCAGTAAACAAGGTTAAGAGTTGCTCTTTAGAAGACTGGAGGGGATGTGCTCAAGGTACCACCCTTTGGGgcagaataaaatgttatctgaaatgaataATAGTTCACTCAGGAAAGTAAATACATTCAGCATTTCTGATCCTGTGAAAGACCTGAAACGGCATTGGGAAAGTTAATGCCAATGTGTTCTGCACAAcgaagttaaaaaagaaaagggtcCTGCTTCCAGAGACTGCAAAGTAGATCTCAATTTACAAGCTTCCAGTGTGAATGAGCCTTAGCCGGGGCTTCGCAGAGACTAGCTACACCAAAACAGTAAAGCCAGAATAGAAACAAGAACTTCAGTATCTTGCATTCACCTCGCCACACCAGCACTTACTTTGTAATGTCTACTCACTATGACGCCTAGACCATGTCCGAATGTGGAAACCACATGGGACTGACATACCCATTAATATTGAAACTGCAAAGTGTAAAAACCAGAGTATTTCAAAACAGGGATACTCGGCAAAATACAGCAGGCAGTTTAAAGTTGGGAATAAACAGGGTATAAAGATATGTGAAGTGGAAAGAAACTGTAGAAAGCAGTAACTGGAACCCAACTGGCTATATACAGGAATTTGGTGCTTCTAAGGTACATTACAGGATATATCcaaaaaataaagctatttCAGTGATCAAAGTACTCTCATCACAGTATCAGCGGGCATCTGCATACATCTTTACACCTAACAGAACGttatcaaatacattgttttagtaAGAAAAAAACCTCAATATTGATGCAAAAATACTGAATAGATCCATTGAAGTACGTTTATCTATACATAAATTGTCTCATCCTTCTGCTGATATTCCAAAACATAGCTTAAGATTTCCAAGAtcgttttagatttttttttttttttttaaagaaaaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81084 True 3319 lncRNA 0.36 2 28328980 28415277

Neighbor

gene id symbol gene type direction distance location
AMCG00020660 kiaa0355,LOC102798860 coding upstream 12231 28294837 ~ 28316749 (+)
AMCG00020655 wtip,LOC103374096,LOC106587570,LOC106536369,LOC106562378 coding upstream 102189 28219743 ~ 28226791 (+)
AMCG00020656 NA coding upstream 132392 28186797 ~ 28196588 (+)
AMCG00020654 NA coding upstream 189541 28130834 ~ 28139439 (+)
AMCG00020648 NA coding upstream 829658 27481648 ~ 27499322 (+)
AMCG00020668 NA coding downstream 241238 28656515 ~ 28710986 (+)
AMCG00020667 NA coding downstream 373471 28788748 ~ 28796313 (+)
AMCG00020670 NA coding downstream 397020 28812297 ~ 28892100 (+)
AMCG00020671 LOC105018092,LOC106561521,LOC106573251,LOC103357197 coding downstream 549768 28965045 ~ 28996330 (+)
AMCG00020673 NA coding downstream 605170 29020447 ~ 29021388 (+)
G64702 NA non-coding upstream 1084871 27243120 ~ 27244109 (+)
G64603 NA non-coding upstream 1893866 26433840 ~ 26435114 (+)
G64601 NA non-coding upstream 1896827 26431674 ~ 26432153 (+)
G64561 NA non-coding upstream 2111850 26216632 ~ 26217130 (+)
G64559 NA non-coding upstream 2115252 26213377 ~ 26213728 (+)
G64894 NA non-coding downstream 522611 28937888 ~ 28938164 (+)
G64916 NA non-coding downstream 634216 29049493 ~ 29049815 (+)
G64957 LOC103376870 non-coding downstream 844277 29259554 ~ 29339283 (+)
G65024 NA non-coding downstream 1571288 29986565 ~ 29988128 (+)
G65063 NA non-coding downstream 2233547 30648824 ~ 30649364 (+)
G64730 hsbp1,LOC102784925,LOC102222837,LOC103023435 other upstream 910460 27415996 ~ 27418520 (+)
AMCG00020621 LOC105904655 other upstream 2232023 26055287 ~ 26096957 (+)
AMCG00020603 NA other upstream 2549998 25762135 ~ 25778982 (+)
G64372 NA other upstream 2775660 25550911 ~ 25553320 (+)
AMCG00020585 NA other upstream 2856094 25459096 ~ 25472886 (+)
G64887 NA other downstream 458353 28873630 ~ 28874072 (+)
G64908 NA other downstream 593386 29008663 ~ 29009601 (+)
G64979 NA other downstream 1049287 29464564 ~ 29465712 (+)
AMCG00020684 NA other downstream 1088950 29504227 ~ 29575346 (+)
AMCG00020697 dynlrb2,LOC106573385,LOC103025073 other downstream 2117916 30533193 ~ 30536564 (+)

Expression


Co-expression Network