AMCG00021864


Basic Information

Item Value
gene id AMCG00021864
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 34242865 ~ 34249647 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021864
ATTAGTTTGCCTGTAAATGGGCGATGGCACTGGAATGATAAAAATCAAACGCTTGAATTTGTCAGtttcaattcaacaatagaaacaaaagacaaaaggaagaaaataaaatctatacattttcagGAGCATGTTAATAAGTGTGCAGAAAGGAGTCAGCAACTAAATGACTTTCTCTCAGCCCTACTGCTATACCTATCCTGTTACTTTGAAAAACAAGCTTTGGAAAAAAAGCCCAAGCCCTTAATGGCGGAGCCAAGCATTACAGAAAGAAGAAACATGGCAGAGGCATGTGCAAAGGTTGAACTAGCAAGAAAGAAGCTTGCTTTCATGTACTCAGTCCTGGTCCTTGGGCTTGGACTGTCTCAGCAGCACCATATGGACTGTGGAAGCTTCTCTGCATATGCAGCCTGGGTGACATTCAAACGCAGTGATCTTCAAGGGATCCAAGAGGAGGTGGGCAGGCTCCTTCGTTCTGACACCTTCAATCCTGCAAGCAGGGTAAAGGAGCATGACGAAGAGCAGGCAGGAAAGGATACCTATTTAATAGAAGGAACAGCTTCTGCCCTTGTTAAAAGtgtCGGGATCATTGGGCAGCCTTTGAGCCAGTTCAGCCGCCACACTCTGGTGCCTCTGGGTTCTGAACAGGAAGATGAAGAAGAGGATGGGTGTGATCAGCACATCAGAAGCAGCGTAGCTTCCTTCAGATCTAGGGGCCCTTTATCATCAGAAGCAGGGAGACATGGTGGATCTAGCCAGGTTAGCGCTGTTATCTCTAGGGCAACAACAGTGGGAATCTACTCAGACACTTAA

Function

GO: NA

KEGG:

id description
K17575 PPP1R36; protein phosphatase 1 regulatory subunit 36

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021864 True 813 mRNA 0.46 6 34242865 34249647

Neighbor

gene id symbol gene type direction distance location
AMCG00021860 LOC107748562 coding downstream 53339 34179592 ~ 34189526 (-)
AMCG00021861 NA coding downstream 227975 34006659 ~ 34014890 (-)
AMCG00021845 NA coding downstream 2145346 32095525 ~ 32097519 (-)
AMCG00021846 NA coding downstream 2195281 32047110 ~ 32047584 (-)
AMCG00021847 NA coding downstream 2205286 32031688 ~ 32037579 (-)
AMCG00021865 NA coding upstream 2027 34251674 ~ 34260396 (-)
AMCG00021863 LOC107751906 coding upstream 14168 34263815 ~ 34274711 (-)
AMCG00021866 NA coding upstream 77511 34327158 ~ 34348033 (-)
AMCG00021870 NA coding upstream 496056 34745703 ~ 34757627 (-)
AMCG00021878 grina coding upstream 517205 34766852 ~ 34784712 (-)
G88939 NA non-coding downstream 65384 34177047 ~ 34177481 (-)
G88918 NA non-coding downstream 262037 33976080 ~ 33980828 (-)
G88883 NA non-coding downstream 397413 33845114 ~ 33845452 (-)
G88873 NA non-coding downstream 481391 33761242 ~ 33761474 (-)
G88871 NA non-coding downstream 482245 33760272 ~ 33760620 (-)
G88991 NA non-coding upstream 34737 34284384 ~ 34286302 (-)
G89003 NA non-coding upstream 94988 34344635 ~ 34345989 (-)
G89011 NA non-coding upstream 170113 34419760 ~ 34420279 (-)
G89130 NA non-coding upstream 829926 35079573 ~ 35081173 (-)
G89212 NA non-coding upstream 1120459 35370106 ~ 35370480 (-)
AMCG00021849 NA other downstream 2173401 32063385 ~ 32069464 (-)
AMCG00021830 eny2,LOC100694417,LOC103393926 other downstream 3110680 31129583 ~ 31132185 (-)
AMCG00021820 NA other downstream 3354277 30877848 ~ 30888588 (-)
G88527 NA other downstream 3818253 30337583 ~ 30424612 (-)
G88405 dtbp1,dtnbp1,LOC106596829,LOC106606149,LOC106596393 other downstream 4500057 29730077 ~ 29742808 (-)
AMCG00021867 LOC107596751,LOC107685553,LOC107743232 other upstream 10357 34260004 ~ 34356907 (-)
G89004 LOC107685553,LOC107596751,LOC107743232,LOC107662664,LOC108270036 other upstream 97341 34346988 ~ 34380295 (-)
AMCG00021868 slc6a19b,LOC108270036,LOC107596751,LOC107685553,LOC107743232,LOC106606020 other upstream 129054 34378701 ~ 34388010 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other upstream 1125369 35375016 ~ 35395771 (-)
G89368 NA other upstream 1694105 35943752 ~ 35946984 (-)

Expression


Co-expression Network