G695


Basic Information

Item Value
gene id G695
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 3112270 ~ 3120797 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU1062
tttgcaccCCTTCATTACTTGTCCGTATATATGAGAGAGTAACAAAATCCAAATATGCAATCcatttagtactttttttttctttaaaaaaaagaaaacaaacaaactgtaagGCATGTCTGCTTGCACGACATAAACGTCGCATTAAAACTTCACCTATAGTAGCTCAAAGCAGCGTGCTTCAGTAGGAACAACGTTCACTTTCAGACCACAATCTTCTCAAAGTGTTTCGAACATGTATTTGACATGGCTTGTACTTGTTTACATGtaaacgtttttcttttttttttcttgtttcgtCACTCATATAAAGATCTAAATGTGGAACTCAATTTCAAAGTGCAATGtggaaaaagaaagcaaaacgCATAGAAACAGATTCGCTCGGAGTGCCTGGATCTGGTTTGTATCCATCAAACACATTACGacgtgaaaaaataaaaaccacgTGTCCGTTTTGACGGATGGACGGCTTAGTCTTCGCATCCTCCGAGACCGATAAAATAGGCGATACCGTTCAATCGGTATCATCAGAGAAAAGCCAAATACATTCAGACCACAAGTAGAAACACGCAAGCTATTAGGAAAAGTTTTACATGACATGCTTCGTCTTCGGATTCTGACAGGAGCGCACGAGAACGGAGGGCAATGGAAGAGAAAAACGGCAGTTTTTGCGTTAACTTGCCCCTTCGTGATCCACTGTATATAGCAACCAGCCCATTTGAGACCCTCAACCACTTTCGACTTCCTTGAAGTAAAGTTTTCGTCTGAAGAGCATTCATGAATTACGccgtttgtgtttttttcttcttctgcatTCTTCGGCGTTCACACCTAAcacttaaagtcaacatgaattGACCGATTATGCTCCCTTTAAGTGAGAAAAACACGATTTTAAAGCGAATTTTAGCCCTTATGTTGTGTTCTTGTCATTTTGACCTGCAGCgaatttgattaaaaaccaaaaaccaaaaaacaaagtTAATGTTTAAGCATTGTCTCTCCCGGTTctgagttttttgttttttcctttaagctCCTCATTAAACTCGGAGGTGTCCCTGTTCATGTAGGCTAGTCTTTTTTGACCAGGAACACAACAAGTTCAACGAGGAAGTAAAAAACGaccgaacaaaaaaaaaaaactagataaCTTTTAGGCGCgacaattttaaaatagatgtaaaaatggtaaaaaaaaaaaacatattattttatgccaaatatcatatttatgaaacatgatatatataaaaagaaaataattgtgtgtagttttagtaatatttactCAACCAAACCAATCAAACCTGtgctaaaaagcaaaaaaggcaaaaatattgaatataagATCTAGGGCCTTATTTATACAGCGTGCGCATGCACAGATTTGATCGTAGAGTGTGCTTATACTTAAAACCACGCCAATGTCAGGGTCTGAGCAGACGTGTGCATTTTTTATTGGGagtattgcaggtttttgaaaacgTAAAGAGTTCCTGCCGCTCGCTGCTGCAAATTATGATGATCGGTGAGGTTTTGcgttaatgacattaattagaAAGACGGAGAGCCGAAACCATTTATTTGCGCGCAAGTTCAAGGTCCTTTGAGATGAACAGATTTCACACCCGAAAGAGAGGCGTACTCGGGTTTTCTCGTTTATACGTTCATACGAAAAATGGTCGCAAGATCACATTTAGCATGGTTTCTACgcaacattttctaaatgagGTCCCTGGTGATAATAGAGCACAGTGACAGATTTACAAGCAATGCAAATGTCGTTTTTTTGGATGAGGAACACCAAACTAGGATGTTCTGCACGGCACAAGGGCTAGGAAGATGTTACAGTGAATAGGATTTAAAATCTGacttcatgttgactttaagacACAGCTATGTGTTCGACCTTTCCTCAACGTGCCCTCTCTCTTGGCTCACTGAATTTCTCATTTCCAAAACCCACGAGATGCTTTCTGAGCCTTTCTGGGAAGACAAAAGTACCCAGGCATGAGCAAAAAGCACATCGTCTTCTGCTACCTGTCCTGCCTTCAAATACCAGACGCAGTGGAGCGTCGCCGGACTCTCTCGCGTTTCATTTCCGAAGCTGTTTGCGCGTCTATATTCCACACGCCACCCCGCACTTTAATTCAACCTTCACGCATCTCTGAGAAAAGAACATTAGAGGATCTTTTAGCATCTTTGCATTTCAGTGATGACAAGAGCGTGATGCATGAGCAGGCGGCTCTCAACATAAAGCGCAGCTTTATGGTTCCGGATGAATGCACGGCGTCCTTCCATAAACCAAAGAGTTGTTTGGAGAAGCTGTCATTAAACGATACATTAACACATGCCAGCATTCATAACGGGAGGTCTGAGCCATTAAACCGCTAATTCTGTCGGTTTGCTCGATGTATTTGAATAGCGCTGGATTGGGAACATTCATAACTACAGATACAAGTCAAACCAAGAAAGTGCTCTTATAACATTCTAAGCGACTCAATGGGCCTCGTTCGTGAAACATAAGCAGAACAATGTaaatcgtatatatatatatatatatatatatatgttttgaacGCGGTTTAAAATCAAGGcgtagttcactcaaaaactaAAGTTATAAAATTAAGCGGGTGTAGATGTTTCGACAGATTTGGATAAATGTAGCATTGCTTCACGGatgccctgcagtgaatgggtgAAATGCAATGCTACCGGCTTTAGTTTCATAAACGAGGCCTGCTGTTTcacaacaaaataattttgtaaatgcaaatggTTATACATGAAACGATGATATGGCGGGTTacatataaaaactgaaaaaaaaaaggttgttaaGTAAATGAGGGTTATGCATACATAATCCATTACATTGATGAATATATAAACGAGCGTAAGGAACATGAATCAGTCGGGTTTAACACTGGCttttcaatagaaaaaaaactatccCAAATcagaaagttattttaaagcagcCCGTTTCAGGCACATCCCAAACAAacaacgaaacaaaaaaaagaccttGGTTAAATTAATTATTGGGTTTGAAAGAGCAAAAAACATCATTCTTTTGCAAGAGCTGTTTTGTTAGATACGCGCTTTCGAATAAAAGTTGCTAACTGGTAAagccaaaatatataattatattagaaatataaataaatctttctctgtaagaaaacattttataactaaaacctttatatattaAGATATGGATCATTAATTTTGAATCAAGCAGGAGCAGCCCTCTGTAAGACTCGACCTTCACGCTCACCCAAAGCCATCCCAGGTCCTAGAAAACGACCGTCAGCcgagcaaaacaacaacaaaaacacttcaaCGGAAGAGTAAAGCGTTAAAATTGTGTGGAAATCACAGTTGAAAACATTTACTCATGACCTCCCCATGCATTCTCACAGTGGTACATAAACAAGTCGATTcatatagatttttattcttacttttttttttctttataacgTCTGCTTTTAATGAACTCGGGAGGGGCGTaacgcaaacaaaaaaaacgaaaagaaaaaaaaaaacaaaaagcgtaTTTTCGTCGTCTCGCTTTATGCAgtataaaaggaaaacaaaaatagattttcatATTTCCCCATTCTCTCCCGAAAAGGCAAAAGCGACCCCCTTTAGCACGGCGACCGCTTTTCCTTCCCAAaagtttgcttttcttttaacttCATTTAGAAACGAGAGCAGTCGGCTTCTGATTGCACCAAGCATTCTTTGGAACAAGCAGGATGCAAAGGTTTCCTCTTCACGTCTAGCTAGCTAGCTTGCTCTCCTTTTTTCATGGGCTTTttcttgctattttttttttttggaaaacgtCCGGTCCAGGTAGGGAAAGGCTAACAGCGCGAGCGACGCTGCTTCTGTCATATGCGTCCGTGTGGCTGCGTGCCGCCTCCTGCCATTATCTCcaccgcagcagcagcagcagccacgTGAGGGCCGTTCCGGCGGAGAGTAACCGCAGCGAGGGCGTCTGCCGGGGGCCCGCCGCGTCTGCCGGGGGCTGAGGGTCGCTCTTGTCTGCTTCCAGCATCGGTGGCTCCGTGTGGACCACTTCTGGCTCCGTGGTGAAGCCGCTTCCGCTGCCCGAGCCGCTCTC
>TU1063
tttgcaccCCTTCATTACTTGTCCGTATATATGAGAGAGTAACAAAATCCAAATATGCAATCcatttagtactttttttttctttaaaaaaaagaaaacaaacaaactgtaagGCATGTCTGCTTGCACGACATAAACGTCGCATTAAAACTTCACCTATAGTAGCTCAAAGCAGCGTGCTTCAGTAGGAACAACGTTCACTTTCAGACCACAATCTTCTCAAAGTGTTTCGAACATGTATTTGACATGGCTTGTACTTGTTTACATGtaaacgtttttcttttttttttcttgtttcgtCACTCATATAAAGATCTAAATGTGGAACTCAATTTCAAAGTGCAATGtggaaaaagaaagcaaaacgCATAGAAACAGATTCGCTCGGAGTGCCTGGATCTGGTTTGTATCCATCAAACACATTACGacgtgaaaaaataaaaaccacgTGTCCGTTTTGACGGATGGACGGCTTAGTCTTCGCATCCTCCGAGACCGATAAAATAGGCGATACCGTTCAATCGGTATCATCAGAGAAAAGCCAAATACATTCAGACCACAAGTAGAAACACGCAAGCTATTAGGAAAAGTTTTACATGACATGCTTCGTCTTCGGATTCTGACAGGAGCGCACGAGAACGGAGGGCAATGGAAGAGAAAAACGGCAGTTTTTGCGTTAACTTGCCCCTTCGTGATCCACTGTATATAGCAACCAGCCCATTTGAGACCCTCAACCACTTTCGACTTCCTTGAAGTAAAGTTTTCGTCTGAAGAGCATTCATGAATTACGccgtttgtgtttttttcttcttctgcatTCTTCGGCGTTCACACCTAAcacttaaagtcaacatgaattGACCGATTATGCTCCCTTTAAGTGAGAAAAACACGATTTTAAAGCGAATTTTAGCCCTTATGTTGTGTTCTTGTCATTTTGACCTGCAGCgaatttgattaaaaaccaaaaaccaaaaaacaaagtTAATGTTTAAGCATTGTCTCTCCCGGTTctgagttttttgttttttcctttaagctCCTCATTAAACTCGGAGGTGTCCCTGTTCATGTGGtgctttg

Function

GO:

id name namespace
GO:0019867 outer membrane cellular_component
GO:0031968 organelle outer membrane cellular_component
GO:0005741 mitochondrial outer membrane cellular_component

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05012 Parkinson disease
ko05016 Huntington disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU1062 True 4153 lncRNA 0.30 2 3116330 3120797
TU1063 False 1083 lncRNA 0.36 2 3112270 3120797

Neighbor

gene id symbol gene type direction distance location
cep97 NA coding downstream 372681 2732846 ~ 2739589 (-)
nfkbiz LOC107751657,LOC107575617 coding downstream 379912 2726297 ~ 2732358 (-)
eed eed,LOC107751659,LOC107662672 coding downstream 388350 2720655 ~ 2723920 (-)
hikeshi hikeshi,zgc:110091,LOC106574699 coding downstream 392127 2717987 ~ 2720143 (-)
LOC122342272 LOC107751049 coding downstream 394426 2710717 ~ 2717844 (-)
LOC122353624 LOC107730401,LOC107558902,LOC107677853,LOC107698126,LOC107561275,LOC107737038,LOC108411062 coding upstream 574368 3695165 ~ 3701245 (-)
ndfip2 ndfip2,LOC107676059,LOC107549434,LOC107750462,LOC107674006,LOC108411896 coding upstream 1410992 4531789 ~ 4546466 (-)
mnx2b mnx2b,LOC107750883,LOC107674001,LOC107556279,LOC107676047 coding upstream 1449037 4569834 ~ 4574420 (-)
fn1b fn1b,LOC107749885,LOC107556289,LOC107674002,LOC107750053,LOC107676051,LOC107549419 coding upstream 1476283 4597080 ~ 4618627 (-)
nrp2a nrp2a,nrp2,LOC107556288,LOC107749808,LOC107750056,LOC107673990,LOC107676043 coding upstream 1552892 4673689 ~ 4739460 (-)
G692 NA non-coding downstream 42201 3066811 ~ 3070069 (-)
LOC122351434 NA non-coding downstream 278539 2821188 ~ 2833731 (-)
G681 NA non-coding downstream 369842 2740227 ~ 2742428 (-)
G666 NA non-coding downstream 457438 2652717 ~ 2654832 (-)
G652 creg1,LOC107694464,LOC107751059,LOC107551109,LOC107739160,LOC107654633 non-coding downstream 547860 2562191 ~ 2564410 (-)
G720 NA non-coding upstream 165159 3285956 ~ 3286209 (-)
G730 NA non-coding upstream 220765 3341562 ~ 3341953 (-)
G732 NA non-coding upstream 222294 3343091 ~ 3343493 (-)
G792 NA non-coding upstream 901570 4022367 ~ 4024242 (-)
G794 NA non-coding upstream 903909 4024706 ~ 4026047 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other downstream 422806 2688765 ~ 2689464 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other downstream 1507286 1592069 ~ 1604984 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other downstream 1880623 1076188 ~ 1231647 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other downstream 2363906 738137 ~ 748364 (-)
G67 NA other downstream 2676145 435808 ~ 436125 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other upstream 15711 3136508 ~ 3284786 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other upstream 887043 4007840 ~ 4014287 (-)
G820 NA other upstream 1177513 4298310 ~ 4299193 (-)
mdh1b mdh1b other upstream 1835322 4956119 ~ 4960210 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other upstream 2723347 5844144 ~ 5853249 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G106099 NA non-coding NC_035908.1 CM008311.1 24113354 ~ 24119683 (-)