G3374


Basic Information

Item Value
gene id G3374
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 14681459 ~ 14774677 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4832
CTGCACAGCACTGTTGAGGAAGCAGCTGTTCTGGCCTGGCTCATTAAGAAGACCTTTGGTCAAAGCGAGAGAGATCATACTGCCCGGCTGGTAGGACTTGCCCAGCCCCGTCCCGCTCCAGGCACCTGTACCAGCCATGTTGCCTCCAGgctttttaaatagtttgaccCATGCCATGAGGTTGGAGCCTGGCCCACTCCAGCAAACAACCAGAGTCAATCACTGAAGCAACTTGAGGTTGATACATCTGTTTTAGGCAACATTAGTTCTCAGCAGTCCCTGTACCTGACAGAGAAGACCGACTTCACAGTGCCCTACAAAAAGAGCCAAATACACTGCACTGGGTTTCTTTTCGATGTGCAGGATTTGGCAGCACACCATTTGGATATAAAGAACCATTCAAAACAGTTGCTCTTTATTAAGTGGGAACATGTGACTTTTAGCCACAAGTTGCGGCACATTGCTTTATCAGTCCAGCAGTTACTATGACAATGATCTCACTCTGTCTCCTCGGTATGTGTGGATTCATCTGCATCCAGGCACACTGGTAATAAGAGGATGGATGCAGAGAGAAGAACAAATCCATTACTCTCCTCAGCATTTCCAGCAAAGTCAATGGAGGTCACTGAAGGGGGTCATTCATAAAGGCTCCTCAGAACAGGCACTGAAGTAGAACACTGGCTAACAAAGGAAGACctacagagagggagagacacaAAGACAAGGGTTGGGGGTGCAGGTGAGCAATATGAAGAGATAAAATCAATGTTGTTAAATAGAAAGCTACATCAGGGTACTACAGCCATTTTGTACACTGAAGTATTACATAAACGCTGATGCTATTTGCAATTAGGAATTATGTATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4832 True 865 lncRNA 0.48 3 14681459 14774677

Neighbor

gene id symbol gene type direction distance location
fabp2 fabp2,LOC107714631,LOC107572697,LOC107598258,LOC107700317,LOC107695844,LOC107757591 coding upstream 18358 14661658 ~ 14663101 (+)
gucy1b1 gucy1b3,LOC107714654,LOC107757623 coding upstream 21922 14644013 ~ 14659537 (+)
gucy1a1 gucy1a3,LOC107695445,LOC107572203,LOC107700279,LOC107598251 coding upstream 38220 14635220 ~ 14643239 (+)
si:dkey-30k22.5 LOC107695853,LOC107572196 coding upstream 74062 14605452 ~ 14607397 (+)
plrg1 plrg1,LOC107757621,LOC107695461,LOC107700313 coding upstream 92695 14583650 ~ 14588764 (+)
mxd4 mxd4,LOC107695376,LOC107714650,LOC107757594,LOC107700283 coding downstream 58026 14832703 ~ 14843409 (+)
ndufb6 ndufb6 coding downstream 73336 14848013 ~ 14849671 (+)
toporsa topors,LOC107695355,LOC107700322 coding downstream 75483 14850160 ~ 14853910 (+)
LOC122348129 mtap,LOC107595051,LOC107714626,LOC107700323,LOC107598256,LOC107757575,LOC102313215 coding downstream 79533 14854210 ~ 14861916 (+)
tet2 LOC107714646,LOC107695330,LOC107595052,LOC107598249,LOC107700324,LOC107757629 coding downstream 164060 14938737 ~ 14959108 (+)
G3370 NA non-coding upstream 2515 14672314 ~ 14678944 (+)
LOC122353352 NA non-coding upstream 57366 14620659 ~ 14624093 (+)
G3361 NA non-coding upstream 65542 14614933 ~ 14615917 (+)
G3326 fgg,LOC107745866,LOC107695488,LOC107714655,LOC107695473,LOC107700315,LOC107757622,LOC107572199 non-coding upstream 84912 14533015 ~ 14596547 (+)
G3324 NA non-coding upstream 149253 14531016 ~ 14532206 (+)
G3381 LOC107714625,LOC107695349,LOC107595098 non-coding downstream 87935 14862612 ~ 14869892 (+)
G3432 NA non-coding downstream 251033 15025710 ~ 15029067 (+)
G3443 NA non-coding downstream 262602 15037279 ~ 15037670 (+)
G3431 NA non-coding downstream 288574 15063251 ~ 15114948 (+)
LOC122350773 NA non-coding downstream 670511 15445188 ~ 15446124 (+)
npy2r npy2r,LOC107572195,LOC107714623,LOC107695741,LOC107757570,LOC107700264 other upstream 68782 14610244 ~ 14612677 (+)
lrata lrat,lrata,LOC107572197,LOC107714634,LOC107695864,LOC107700276,LOC107757590 other upstream 77571 14602312 ~ 14603888 (+)
LOC122345399 NA other upstream 200113 14480198 ~ 14481346 (+)
G3187 gatb,LOC107695556,LOC107695902 other upstream 563026 14114431 ~ 14118433 (+)
slit2 slit2,LOC107700301,LOC107695646 other upstream 1095478 13516208 ~ 13585981 (+)
hemgn hemgn,trmo other downstream 256267 15030944 ~ 15034800 (+)
bnc2 bnc2,LOC107595060,LOC107737409,LOC107737408,LOC107678088,LOC107598241 other downstream 403926 15178603 ~ 15317624 (+)
G3599 NA other downstream 703421 15478098 ~ 15498680 (+)
G3647 NA other downstream 878416 15653093 ~ 15653381 (+)
LOC122348759 raph1b,LOC107654246,LOC107707841,LOC107719733,LOC107705038 other downstream 1289594 16064271 ~ 16069915 (+)

Expression


Co-expression Network