LOC122345399


Basic Information

Item Value
gene id LOC122345399
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 14480198 ~ 14481346 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4698
TGGAAGGATGTGAGTGCAGCAAGAGCGCTTGTGAACAAGAGGAACATGTCACTCtgaagaaggagaaggagagtGTAGAGCAAGTCCGTACGGATGTGGATGTTGTCTGCTGTTATGGATGCAGCTGGGATTGGTCTGGATGTTGGGAGTACTTTGGATGCTGGGAATGCTTTGAATGCTGTGATTGTCCTGGAGTCtgtgattgttttatttgttgctgTGGCATTCTGGAATCGTGTTTGGGATGTTTTTGTGACTGATTCCTCagtaaatggatttttattgacACCAAATCAGTCAGAAGAGATTACAGCTTCTTCAGAAAACACTGAATGCAAAGCCAACACCACATTCTACAACAAACATTAGGACGTCTTTACTGAATGTCATAATGATCAAATTACACTAACAAATCAAATAGAATAACCTATAACCTTTTGTTTAAGTAGCCTACTGTATGATCACAGCTTTAAATATACACTTCATGATAGTGGAAGAGAAAGTAAACATGGATTGGCATAAAAACGAGTTTCACAAGATTCTTGAGCCTCGGGTGATTTTGATTCTGTCGCTTGAAATGTCGTTTGCTTTGCCTTTTTGAGGATGCTTCATCTTCACCACAGGACAGTTAGTGTGTTGAAACCAAACACAGCTTGTGAAGAACTTCATGCTACTTCATGCTACACTTCAGTTAAAGGACCTCTGGGCTTCATTTAACATATCCCCGTGGTCAGTTACCATCAATATACTTTTAGTTATCAACATGCATGTCAAGAATTTCTGAGAAGATTCTCTAAAACACACCTGGCCCTGGggatatttttgtaaaacatttttttaataaaataaacaaatacctAAGATTTTAGAAAGTAA
>XR_006251002.1
CATTGCCCTGATTCAAACCCTTCATTGAAACCTACTAGTGGAGCTGTGGAAGGATGTGAGTGCAGCAAGAGCGCTTGTGAACAAGAGGAACATGTCACTCtgaagaaggagaaggagagtGTAGAGCAAGTCCGTACGGATGTGGATGTTGTCTGCTGTTATGGATGCAGCTGGGATTGGTCTGGATGTTGGGAGTACTTTGGATGCTGGGAATGCTTTGAATGCTGTGATTGTCCTGGAGTCtgtgattgttttatttgttgctgTGGCATTCTGGAATCGTGTTTGGGATGTTTTTGTGACTGATTCCTCagtaaatggatttttattgacACCAAATCAGTCAGAAGAGATTACAGCTTCTTCAGAAAACACTGAATGCAAAGCCAACACCACATTCTACAACAAACATTAGGACGTCTTTACTGAATGTCATAATGATCAAATTACACTAACAAATCAAATAGAATAACCTATAACCTTTTGTTTAAGTAGCCTACTGTATGATCACAGCTTTAAATATACACTTCATGATAGTGGAAGAGAAAGTAAACATGGATTGGCATAAAAACGAGTTTCACAAGATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4698 True 876 TUCP 0.40 2 14480244 14481346
XR_006251002.1 False 587 lncRNA 0.40 2 14480198 14481011

Neighbor

gene id symbol gene type direction distance location
tmem131l LOC107695518,LOC107745862,LOC107757619,LOC107700308 coding upstream 21180 14425254 ~ 14459018 (+)
mnd1 mnd1,LOC107700309 coding upstream 56053 14413027 ~ 14424145 (+)
LOC122350619 dctpp1,LOC107695562 coding upstream 636807 13842778 ~ 13843391 (+)
fhip1aa fam160a1,fam160a1a,LOC107745858,LOC107695572,LOC107700307,LOC107757618,LOC107598295 coding upstream 652816 13809693 ~ 13827382 (+)
rps3a rps3a,LOC107695588 coding upstream 693585 13783815 ~ 13786613 (+)
LOC122346953 pcdh8 coding downstream 9438 14490784 ~ 14498314 (+)
plrg1 plrg1,LOC107757621,LOC107695461,LOC107700313 coding downstream 102304 14583650 ~ 14588764 (+)
si:dkey-30k22.5 LOC107695853,LOC107572196 coding downstream 124106 14605452 ~ 14607397 (+)
gucy1a1 gucy1a3,LOC107695445,LOC107572203,LOC107700279,LOC107598251 coding downstream 153874 14635220 ~ 14643239 (+)
gucy1b1 gucy1b3,LOC107714654,LOC107757623 coding downstream 162667 14644013 ~ 14659537 (+)
G3262 NA non-coding upstream 74195 14402406 ~ 14406003 (+)
G3245 fbxw7,LOC107757568,LOC107745860 non-coding upstream 206413 14268912 ~ 14273785 (+)
G3165 gatb,LOC107695556 non-coding upstream 597803 13828059 ~ 13882395 (+)
LOC122345860 sh3d19,LOC107745872,LOC107695906,LOC107598296,LOC107700261 non-coding upstream 687358 13787434 ~ 13792840 (+)
G3125 NA non-coding upstream 882084 13597901 ~ 13598114 (+)
G3282 NA non-coding downstream 84 14481430 ~ 14481806 (+)
G3322 arfip1,LOC107695488,LOC107745866,LOC107700312 non-coding downstream 45271 14526617 ~ 14528471 (+)
G3324 NA non-coding downstream 49670 14531016 ~ 14532206 (+)
G3326 fgg,LOC107745866,LOC107695488,LOC107714655,LOC107695473,LOC107700315,LOC107757622,LOC107572199 non-coding downstream 51669 14533015 ~ 14596547 (+)
G3361 NA non-coding downstream 133587 14614933 ~ 14615917 (+)
G3187 gatb,LOC107695556,LOC107695902 other upstream 361765 14114431 ~ 14118433 (+)
slit2 slit2,LOC107700301,LOC107695646 other upstream 894217 13516208 ~ 13585981 (+)
rhoh rhoh,LOC107548321,LOC107598269,LOC107757583 other upstream 1274482 13203059 ~ 13205716 (+)
dnah6 dnah6,LOC106610484 other upstream 1755740 12659262 ~ 12724458 (+)
kdm4c kdm4c,LOC107702398,LOC107548355,LOC107570226,LOC107655842,LOC107750465,LOC107709452 other upstream 1821691 12644679 ~ 12658507 (+)
lrata lrat,lrata,LOC107572197,LOC107714634,LOC107695864,LOC107700276,LOC107757590 other downstream 120966 14602312 ~ 14603888 (+)
npy2r npy2r,LOC107572195,LOC107714623,LOC107695741,LOC107757570,LOC107700264 other downstream 128898 14610244 ~ 14612677 (+)
G3380 LOC107572695,LOC107695836 other downstream 242199 14723545 ~ 14791788 (+)
hemgn hemgn,trmo other downstream 549598 15030944 ~ 15034800 (+)
bnc2 bnc2,LOC107595060,LOC107737409,LOC107737408,LOC107678088,LOC107598241 other downstream 697257 15178603 ~ 15317624 (+)

Expression


Co-expression Network