G3475 (gucy1a3,LOC107700279,LOC107695445,LOC107572203,LOC107598251)


Basic Information

Item Value
gene id G3475
gene name gucy1a3,LOC107700279,LOC107695445,LOC107572203,LOC107598251
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 14635694 ~ 14636587 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU5004
atatatatatatatatatataattgtataaaacaATGATGAAAAATACTGGTGCAGTACAATTACTGCATACTGTCGTGAGAATGAACACAATAATTCTGTATGGAAATTATAAATGATCGACAAATTGTCCAAATTTGAAGGACATTATAAATTCTCACAGATGTAAGATGACAAAAAATAACCTCTTACCAACTCATGTCTATCTGCTGTTTCATAACTCTGATCAATGCACTTCGTATTTTTTTTTACCTCCGGACACACCAGCTTTCGGATGCTCTCGCCCAGTGAATGCAGATTAACTTTGCTCCGGCTTATTTTGCGTCTGGGCAGAATGTTTGTATTTGTGCCCTGCACCTCTCTGGATACGGGCACAACATCGACCGCGCCGCTTTCCTCAAAGTCTGCGGGATCCTCGTTTCCCACGACCATGGAAAACGGGCATTCACCCGCAATCTTGAGATCCTTCAGTTTAGCGCAAAACATTCTTTGCGTAATAGTCCTCTCCAAACGTGCGGCCAAAAAAATATCTACATGGTGAATATCCGAGCGAGACCGTTCCTACCCATCTGAATCCAGGACAGGAGCGTTTCCACTATAGGTGCCGGACggatatcagcctagaaaatgtaatttccccGCGCGCGCACGTCTCATCCAGGACTAAGCT

Function

NR:

description
PREDICTED: guanylate cyclase soluble subunit alpha-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5004 True 669 lncRNA 0.43 2 14635694 14636587

Neighbor

gene id symbol gene type direction distance location
map9 LOC107714632,LOC107695730 coding downstream 12465 14615314 ~ 14623229 (-)
fgg fgg,LOC107572199,LOC107714655,LOC107695473,LOC107700315,LOC107757622 coding downstream 39208 14592215 ~ 14596486 (-)
dchs2 dchs2 coding downstream 53473 14554871 ~ 14582221 (-)
sfrp2 sfrp2,LOC107745867,LOC107695500,LOC107757589,LOC107700275 coding downstream 95248 14536730 ~ 14540446 (-)
arfip1 arfip1,LOC107745866,LOC107695488,LOC107700312 coding downstream 105126 14522289 ~ 14530568 (-)
LOC122342943 usp53b,LOC107714652,LOC107572698,LOC107695415,LOC107757572,LOC108442608,LOC107700316 coding upstream 67906 14704493 ~ 14706643 (-)
LOC122342957 NA coding upstream 106058 14742645 ~ 14743676 (-)
LOC122347500 myoz2,myoz2b,LOC107695402,LOC107700320 coding upstream 142614 14779201 ~ 14784805 (-)
synpo2b LOC107572695,LOC107695836 coding upstream 149812 14786399 ~ 14793366 (-)
kcnip4b si:ch211-145b13.5,LOC107757593,LOC107695828,LOC107700280,LOC107714629 coding upstream 159458 14796045 ~ 14803854 (-)
G3357 NA non-coding downstream 24908 14610497 ~ 14610786 (-)
G3318 NA non-coding downstream 144056 14490724 ~ 14491638 (-)
G3266 NA non-coding downstream 222719 14412767 ~ 14412975 (-)
LOC122351408 NA non-coding downstream 367909 14249605 ~ 14267785 (-)
G3232 NA non-coding downstream 666914 13961708 ~ 13968780 (-)
LOC122351313 NA non-coding upstream 97791 14734378 ~ 14736414 (-)
LOC122353106 NA non-coding upstream 105521 14742108 ~ 14742636 (-)
G3493 NA non-coding upstream 112800 14749387 ~ 14750174 (-)
G3495 pdcd4a,LOC107598278,LOC107700321,LOC107757625,LOC107695387,LOC107595047,LOC107714648 non-coding upstream 121533 14758120 ~ 14759025 (-)
LOC122336242 NA non-coding upstream 134880 14771467 ~ 14772730 (-)
LOC122350629 gatb,LOC107695556,LOC106602370,LOC107695902 other downstream 740410 13881893 ~ 13895284 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other downstream 793030 13829463 ~ 13842664 (-)
G3072 NA other downstream 1343971 13291296 ~ 13291723 (-)
smim14 smim14,LOC107757606,LOC107700293 other downstream 1476250 13154486 ~ 13159444 (-)
smim18 NA other downstream 1662682 12969093 ~ 12973012 (-)
usp53b fabp2,usp53b,LOC107580697,LOC107572698,LOC107714652,LOC107695415,LOC107700316,LOC107598280 other upstream 24887 14661474 ~ 14687860 (-)
myoz2b myoz2,myoz2b,LOC107695402,LOC107700320 other upstream 50009 14686596 ~ 14714546 (-)
G3491 gpank1 other upstream 110242 14746829 ~ 14748975 (-)
cxxc4 cxxc4,LOC107695705 other upstream 261614 14898201 ~ 14918786 (-)
G3522 NA other upstream 288498 14925085 ~ 14925363 (-)

Expression


Co-expression Network