G3491 (gpank1)


Basic Information

Item Value
gene id G3491
gene name gpank1
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 14746829 ~ 14748975 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU5035
GCGTGGCATTGATGTCAACTTCCGTGATGATTTTTACTGGACAGGTGTGATGTGTGCGAGTAAGGCAGGACAAACGGACGCTGTTCGGCTGCTCCTGCAACACGGCGCTGCTTGGGTGGGAGTTGTGGACAAACAGGGCAGAGATGCTCGGGAGCTGGCCCTGCAGGCAGGTCACCAGGATGTAGTGAGAGAACTGGAGCAGTTCAGCGTGTCAGAGATCACAAACACGCCAActacaaacagagagagCGTTCATCCTCAGTGGTGTAATTTGTGTGCTGTGCATTACACAGACAGCACTGAGACACACAACAGGTCCACACTGCATCAGTTCAGCGAGCTCCGCCCCCCAACCACCCCTCAATACTGCCTGCCCTCTTCCAGCAACAGCTACAAAATGATGCTCCGTTTGGGGTGGGACCCCGCTTCTGGTCTCGGACCCGCCCACTCCGGACGCAAAAACCCAGTAAGCACTGTACTAAAGAGAGACCAGGCCGGCCTGGGGTATGGAGCTAGCCCACAGTCGAAAGTCACACACTTCCAGGCCAAAGATCCTCAGGCAGTGCAACACGTACGTAAACAGAAAAGACTGGAGAAGAGACAGGAGAA

Function

symbol description
gpank1 Predicted to enable nucleic acid binding activity. Orthologous to human GPANK1 (G-patch domain and ankyrin repeats 1).

NR:

description
G patch domain and ankyrin repeat-containing protein 1 isoform a

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5035 True 609 TUCP 0.55 3 14746829 14748975

Neighbor

gene id symbol gene type direction distance location
LOC122342957 NA coding downstream 3153 14742645 ~ 14743676 (-)
LOC122342943 usp53b,LOC107714652,LOC107572698,LOC107695415,LOC107757572,LOC108442608,LOC107700316 coding downstream 40186 14704493 ~ 14706643 (-)
map9 LOC107714632,LOC107695730 coding downstream 123600 14615314 ~ 14623229 (-)
fgg fgg,LOC107572199,LOC107714655,LOC107695473,LOC107700315,LOC107757622 coding downstream 150343 14592215 ~ 14596486 (-)
dchs2 dchs2 coding downstream 164608 14554871 ~ 14582221 (-)
LOC122347500 myoz2,myoz2b,LOC107695402,LOC107700320 coding upstream 30226 14779201 ~ 14784805 (-)
synpo2b LOC107572695,LOC107695836 coding upstream 37424 14786399 ~ 14793366 (-)
kcnip4b si:ch211-145b13.5,LOC107757593,LOC107695828,LOC107700280,LOC107714629 coding upstream 47070 14796045 ~ 14803854 (-)
si:ch211-145b13.6 NA coding upstream 55679 14804654 ~ 14806247 (-)
gpank1 gpank1,LOC107682883 coding upstream 58927 14807902 ~ 14812747 (-)
LOC122353106 NA non-coding downstream 4193 14742108 ~ 14742636 (-)
LOC122351313 NA non-coding downstream 10415 14734378 ~ 14736414 (-)
G3475 gucy1a3,LOC107700279,LOC107695445,LOC107572203,LOC107598251 non-coding downstream 110242 14635694 ~ 14636587 (-)
G3357 NA non-coding downstream 136043 14610497 ~ 14610786 (-)
G3318 NA non-coding downstream 255191 14490724 ~ 14491638 (-)
G3493 NA non-coding upstream 412 14749387 ~ 14750174 (-)
G3495 pdcd4a,LOC107598278,LOC107700321,LOC107757625,LOC107695387,LOC107595047,LOC107714648 non-coding upstream 9145 14758120 ~ 14759025 (-)
LOC122336242 NA non-coding upstream 22492 14771467 ~ 14772730 (-)
LOC122336348 usp53b,LOC107714652,LOC107572698,LOC107695415,LOC107598280,LOC107700316,LOC108442608 non-coding upstream 23765 14772740 ~ 14773920 (-)
G3502 NA non-coding upstream 99050 14848025 ~ 14848576 (-)
myoz2b myoz2,myoz2b,LOC107695402,LOC107700320 other downstream 32283 14686596 ~ 14714546 (-)
usp53b fabp2,usp53b,LOC107580697,LOC107572698,LOC107714652,LOC107695415,LOC107700316,LOC107598280 other downstream 58969 14661474 ~ 14687860 (-)
LOC122350629 gatb,LOC107695556,LOC106602370,LOC107695902 other downstream 851545 13881893 ~ 13895284 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other downstream 904165 13829463 ~ 13842664 (-)
G3072 NA other downstream 1455106 13291296 ~ 13291723 (-)
cxxc4 cxxc4,LOC107695705 other upstream 149226 14898201 ~ 14918786 (-)
G3522 NA other upstream 176110 14925085 ~ 14925363 (-)
G3515 coro2a other upstream 271667 15020642 ~ 15029620 (-)
G3571 NA other upstream 481564 15230539 ~ 15230886 (-)
alg11 alg11,LOC107556718,LOC107588826,LOC107705036 other upstream 1320202 16069177 ~ 16073920 (-)

Expression


Co-expression Network