ndufab1a (ndufab1,LOC107725395,LOC107590767,LOC107702508,LOC107722929)


Basic Information

Item Value
gene id ndufab1a
gene name ndufab1,LOC107725395,LOC107590767,LOC107702508,LOC107722929
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6277057 ~ 6280616 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242379.1
TAGCGTCGTGCATTGTGGGAGCGGATTGAGAAACATGGCGGCGCGCATCGTTGTCCGGTGTGTCCGAGCACTAAACCACCGTTCTGTATGTTTTAACCGTGTCACTGCTGCCTCGACATTAACAGCAGCTCCACTCACCCAAGGACGAACATTTTCAGGGCTGACTACTGGACACAAGTCTCTGCCGGCGCAGCTCTCCGGCAGTTCACTTCAGGTTTATCAGTGGAGGAAGTATGGTGGCTTGCCCCCATTAACCCTAGAGAGTGTCCAGGACCGTGTCCTCTACGTCCTGAAGCTCTACGACAAGGTCGACCCTGAAAAGcttcaGGTTACATCTCATTTCATGAAGGATTTGGGATTGGACAGTTTAGACCAGGTGGAGATCATCATGGCAATGGAAGATGAATTTGGTTTTGAAATTCCCGATGCTGATGGCGAGAAGTTGATGACACCGCAGGAGATTGTTGACTACATCGCAGACAAGAAAGATGTTTATGAATAAGCATAAATAACCAATATAAAGATAATCCCATCGGATGACGAAAACCACGGAGCTTTTGTCTGGAACTGTTTATGTTTCGGCTGTTCTTCAtcattctttattctttttgtatttagaTACATGTTTAAATCGGTGTTCATAGTTTTGTTTGTGGCTGCTTGTGATTTGCAGCTCTGCGGCACTGTCTGCTAGATACATGCACAAGCTCCTCGTTCCTTCagtacaatacaaaaaataaagactCTGAAAAGACTGTA

Function

symbol description
ndufab1 Predicted to enable acyl binding activity; acyl carrier activity; and fatty acid binding activity. Involved in mitochondrial respiratory chain complex I assembly and protein lipoylation. Located in mitochondrion and nucleoplasm. Part of mitochondrial respiratory chain complex I. Colocalizes with mitochondrial large ribosomal subunit.

NR:

description
PREDICTED: acyl carrier protein, mitochondrial

GO:

id name namespace
GO:0006633 fatty acid biosynthetic process biological_process

KEGG:

id description
K03955 NDUFAB1; NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242379.1 True 759 mRNA 0.45 5 6277057 6280616

Neighbor

gene id symbol gene type direction distance location
grin2ab grin2ab,LOC107564541,LOC107692695,LOC107722958,LOC108439083,LOC107725390,LOC108258284 coding downstream 71911 6138623 ~ 6205146 (-)
abcg2b abcg2b,LOC107692667,LOC107725367,LOC107564610 coding downstream 170077 6099976 ~ 6106980 (-)
actb1 actb1,actb2,actbb,LOC103039558,LOC102799139,LOC103383494 coding downstream 189295 6084199 ~ 6087762 (-)
fbxl18 fbxl18 coding downstream 193879 6078416 ~ 6083178 (-)
LOC122347076 NA coding downstream 198784 6074411 ~ 6078273 (-)
palb2 palb2 coding upstream 557 6281173 ~ 6288577 (-)
ern2 ern2,LOC107702527,LOC107722925,LOC107590742 coding upstream 19300 6299916 ~ 6312773 (-)
LOC122342505 LOC107565181 coding upstream 49045 6329661 ~ 6330527 (-)
zgc:136472 zgc:136472,LOC107692654,LOC107702524,LOC107572430,LOC107722945,LOC107590714 coding upstream 53321 6333937 ~ 6338319 (-)
ubn1 LOC107692651,LOC107702522,LOC107725361,LOC107722945,LOC107590714 coding upstream 59231 6339847 ~ 6350501 (-)
G1288 NA non-coding downstream 58468 6218244 ~ 6218589 (-)
G1282 NA non-coding downstream 62510 6213641 ~ 6214547 (-)
G1263 NA non-coding downstream 187654 6089023 ~ 6089403 (-)
G1257 NA non-coding downstream 209443 6066311 ~ 6067614 (-)
G1254 NA non-coding downstream 213872 6062356 ~ 6063185 (-)
G1394 NA non-coding upstream 108804 6389420 ~ 6389637 (-)
G1398 NA non-coding upstream 132766 6413382 ~ 6413581 (-)
LOC122347249 NA non-coding upstream 207028 6487644 ~ 6490193 (-)
G1499 fgb,LOC107665922,LOC107692638,LOC107714148,LOC107564337 non-coding upstream 501797 6782413 ~ 6839409 (-)
G1519 NA non-coding upstream 521678 6802294 ~ 6802755 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other downstream 2306 6267663 ~ 6274751 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other downstream 50943 6220604 ~ 6226114 (-)
G1270 zgc:77849,LOC107722949,LOC107692663,LOC107564565,LOC107702534,LOC107590708 other downstream 163534 6111463 ~ 6113523 (-)
LOC122346875 LOC107725387,LOC107564644,LOC107701784,LOC107722954,LOC107702543,LOC101882918 other downstream 423808 5844144 ~ 5853249 (-)
mdh1b mdh1b other downstream 1316847 4956119 ~ 4960210 (-)
gng13a NA other upstream 46407 6327023 ~ 6328341 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other upstream 175428 6456044 ~ 6468254 (-)
LOC122342514 NA other upstream 252885 6533501 ~ 6544558 (-)
trpc5a trpc5a,LOC107564287,LOC107692628,LOC107758875,LOC107590730,LOC108439362 other upstream 790973 7071589 ~ 7134282 (-)
G1642 NA other upstream 845026 7125642 ~ 7170022 (-)

Expression


Co-expression Network