LOC122345850


Basic Information

Item Value
gene id LOC122345850
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 13787431 ~ 13788918 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251040.1
AAGACAATATTATGTTCCACTGAGAGGTTAAGAACATATCTACCTGGGTGAAAGGTGCCTGAGATACTAGTTTATAGGACTGACACATCTCAACAAACTAATTCAGAAAGTTCAAGGATCTAAAAGATCTTCATTCGGGACTCAACATTGATCAGAATGGTCCAGGTTACAGAGGTGCTGGTCTTTCTCTGCGTCCTGATTGGATGGTCACAGGCTTTTCCACATCATGATGTCTTCACAGAGaatgaagcaaacaaaaatgcCGGCAAAACAGAGATAGAAAGACGAGATCTGACTGTGCTGGATTTTACTCCTCCATAGTGTCGCGCCGTCAATATGAGTGCACTTTGTCGTTCCTTTGATTATCACGATGAACTGAAAGTGTCTTATATCGTGACAGATGTTGATGGCTCAGGAATCGATCACATCCGTGTTTTTGGCAATGACCCCATGTGTTTAATCAACACAAAAGAATATAACGGTCTAGACGACAATCGCAACGCTGCGACCATCCTTTATTTTTCCAGCAGCTGCTGCTATGATGATGTGGTGATTCTTGCGGTGGACAAGGCAGGACACACAAGCAAGTGTCCTCCTGCTCTACAACGTGTTACCACAACCATCACACCCACATCCACTAGCTCCATCACAACCAGCTCTCTTCGGTTGACTTCAATACTGATCACACTTAAATCCATGCTTCTCTAAGACGGACGTGCACTTTAAGTAGCCTACGTCACTTCGTTTTTACACTTGTGATTACAATTATTtccacacattttcaaaatacatttaaatcactTGATGTCACTATTaaatgttcacccaaaaatgacagcttgatgtttatctgcttacaaCGCATTCAAgatgtttcttttatatatatatatacacacacagagatttaTTTGTAGATCCTTGCCTATGCATATGTGCCAGAGCCCATTGTTGTGAATGATTTCAAGACAATTGGACATTGTGGTGTATTAGAGGTACATAAATATCATTCAGTTTCCTGCACAATCTGACCTCAATGTATTATCACAAGCAGCAGGGTTTAATTTGGATTTGTTTGTGCAGGTTTGTTTTTACTCAGATTGTGTACCAATTGACTtacattatatgactgacagatgACTTGCTCTATTTTAtggtaaataaatgttgtttctgaTCAAAGAGAGAAATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251040.1 True 1194 lncRNA 0.39 3 13787431 13788918

Neighbor

gene id symbol gene type direction distance location
lrba lrba,LOC107695599,LOC107745856,LOC107598261 coding downstream 5693 13588381 ~ 13781738 (-)
lcorl lcorl,LOC107695657,LOC107569620,LOC107724149,LOC107700260,LOC107700300,LOC107695668,LOC107724150 coding downstream 336268 13434217 ~ 13451163 (-)
fam184b fam184b,LOC107742663,LOC107757610,LOC107700297,LOC107695781 coding downstream 365191 13398841 ~ 13422240 (-)
trnar-ucg_67 NA coding downstream 497091 13290268 ~ 13290340 (-)
trnar-ucg_66 NA coding downstream 497408 13289951 ~ 13290023 (-)
sh3d19 sh3d19,LOC107695906,LOC107745872 coding upstream 1657 13790575 ~ 13808268 (-)
LOC122350613 dctpp1,LOC107695562 coding upstream 324415 14113333 ~ 14114156 (-)
fbxw7 fbxw7,LOC107745860 coding upstream 481335 14270253 ~ 14401149 (-)
tmem154 NA coding upstream 613491 14402409 ~ 14411570 (-)
trim2a trim2,trim2a,LOC107695527,LOC107745864,LOC108434330 coding upstream 670877 14459795 ~ 14478877 (-)
G3211 NA non-coding downstream 782 13783854 ~ 13786649 (-)
G3192 NA non-coding downstream 268440 13518038 ~ 13518991 (-)
G3096 NA non-coding downstream 394964 13392005 ~ 13392467 (-)
G3095 NA non-coding downstream 395546 13391555 ~ 13391885 (-)
G3094 NA non-coding downstream 396130 13391065 ~ 13391301 (-)
G3222 NA non-coding upstream 36576 13825494 ~ 13878315 (-)
G3230 NA non-coding upstream 135357 13924275 ~ 13927061 (-)
G3232 NA non-coding upstream 172790 13961708 ~ 13968780 (-)
LOC122351408 NA non-coding upstream 460687 14249605 ~ 14267785 (-)
G3266 NA non-coding upstream 623849 14412767 ~ 14412975 (-)
G3072 NA other downstream 495708 13291296 ~ 13291723 (-)
smim14 smim14,LOC107757606,LOC107700293 other downstream 627987 13154486 ~ 13159444 (-)
smim18 NA other downstream 814419 12969093 ~ 12973012 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other downstream 860949 12904199 ~ 12926482 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other downstream 1421323 12337962 ~ 12366108 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other upstream 40545 13829463 ~ 13842664 (-)
LOC122350629 gatb,LOC107695556,LOC106602370,LOC107695902 other upstream 92975 13881893 ~ 13895284 (-)
usp53b fabp2,usp53b,LOC107580697,LOC107572698,LOC107714652,LOC107695415,LOC107700316,LOC107598280 other upstream 872556 14661474 ~ 14687860 (-)
myoz2b myoz2,myoz2b,LOC107695402,LOC107700320 other upstream 897678 14686596 ~ 14714546 (-)
G3491 gpank1 other upstream 957911 14746829 ~ 14748975 (-)

Expression


Co-expression Network