G73823


Basic Information

Item Value
gene id G73823
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 971208 ~ 971820 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU109244
CCgagtttaaattaaatcttttatgttttgaatgagcaaaatttattaacatttctaCACGACACAAAGGGATTACAGCGCAGCCACTGGCACGCCGTCTCTGGTCTGGTCAGAAGCACAGAGATGGTGAACATGATATTAATAAGACAGCGACCGCCCCTCTTCACCAGCCGAAGAAGAACAAGCGGCTGCCGTACTTAGAAGGCTGCAGCTCAGACTCGATCGGAGCATTGGGCTCAGGTCTTGGTCGTGAATGGTAGGGGTTTTCAGGCAAGGGCCGGGAGGTCGCCACCTTGGTCACTTGGACAGGTCTCCCAGCTCTGGCCTCTCCCAGCCCATCTTGTCCAGCACACAGCTATCAAACACCTTCTGCTGCTGGCGACAGCGGCGCAGCTCGGTCAGGTTCGAGTAATCCAGACAGGTCCAGTACTCTGTGAAGGACTCGGCACAGTTCCCCTTTATCTGCCTGAGGGTCAAGAGACACGCGATTTAAAGTTGACGCTGTGTCCTGAAGAGCCGTAATGAACCGCGGCACACCTTTT

Function

GO:

id name namespace
GO:0008137 NADH dehydrogenase (ubiquinone) activity molecular_function
GO:0003954 NADH dehydrogenase activity molecular_function
GO:0050136 NADH dehydrogenase (quinone) activity molecular_function
GO:0016651 oxidoreductase activity, acting on NAD(P)H molecular_function
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor molecular_function

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU109244 True 542 lncRNA 0.52 2 971208 971820

Neighbor

gene id symbol gene type direction distance location
morn5 LOC107597617,LOC107685130,LOC107595543 coding downstream 1570 959605 ~ 969638 (-)
mrrf mrrf,LOC107686422,LOC107597620,LOC107713327,LOC107595542,LOC107685133 coding downstream 37142 919056 ~ 934066 (-)
anxa3b anxa3b,LOC107686424,LOC107597622,LOC107713328,LOC107595539,LOC107685135 coding downstream 63035 903052 ~ 908173 (-)
LOC122352985 LOC107744083,LOC107597627,LOC107713333,LOC107685138,LOC107595562 coding downstream 108435 848025 ~ 862773 (-)
arl15b arl15b,LOC107595536,LOC107713334,LOC107686429,LOC107744085,LOC108433533,LOC107597630 coding downstream 128197 809052 ~ 843011 (-)
LOC122353188 strbp,LOC107744073,LOC107686417,LOC107713322,LOC107685126 coding upstream 145285 1117105 ~ 1201918 (-)
dbh dbh,LOC107744238,LOC107658656,LOC107685164,LOC107713263,LOC107597665 coding upstream 416651 1388471 ~ 1405296 (-)
exd3 LOC107658665,LOC107685114,LOC107595558,LOC107713313 coding upstream 521775 1493595 ~ 1532658 (-)
ak3 ak3,LOC107658667,LOC107685112,LOC107744244,LOC107713310 coding upstream 573640 1545460 ~ 1550935 (-)
ptbp3 LOC107658670,LOC107744247 coding upstream 620578 1592398 ~ 1649961 (-)
G73803 NA non-coding downstream 87727 881676 ~ 883481 (-)
G73799 NA non-coding downstream 97308 873064 ~ 873900 (-)
G73709 NA non-coding downstream 166254 804742 ~ 804954 (-)
G73704 NA non-coding downstream 175026 795960 ~ 796182 (-)
G73661 NA non-coding downstream 205556 763883 ~ 765652 (-)
G73843 NA non-coding upstream 63969 1035789 ~ 1036204 (-)
G73844 NA non-coding upstream 65159 1036979 ~ 1040944 (-)
G73826 NA non-coding upstream 85639 1057459 ~ 1058488 (-)
G73861 NA non-coding upstream 139147 1110967 ~ 1112319 (-)
G73869 NA non-coding upstream 141084 1112904 ~ 1113163 (-)
si:dkeyp-41f9.4 NA other downstream 83196 885156 ~ 888012 (-)
G73687 mocs2,LOC107685191,LOC107597632,LOC107595575,LOC107744090,LOC107713337 other downstream 177484 789423 ~ 793724 (-)
G73662 NA other downstream 204862 693448 ~ 766346 (-)
megf10 megf10,LOC107565847,LOC107673753,LOC107705845,LOC107572185 other downstream 574588 359804 ~ 396620 (-)
LOC122353100 golph3,LOC107595534,LOC107685144,LOC107713339,LOC107686434,LOC107552603,LOC107681169,LOC107746803 other downstream 879887 40690 ~ 91321 (-)
G74058 NA other upstream 473503 1445323 ~ 1448886 (-)
G74031 NA other upstream 494931 1466751 ~ 1473878 (-)
nrarpa nrarpa,nrarp other upstream 511579 1483399 ~ 1488008 (-)
adamts6 adamts6,LOC107744255,LOC107685101,LOC107713302 other upstream 802403 1774223 ~ 1846902 (-)
LOC122352692 NA other upstream 1222265 2194085 ~ 2197429 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G407358 NA unknown NC_047624.1 CM018570.1 3169289 ~ 3169714 (+)