zpr1 (zpr1,LOC107693980,LOC107747003,LOC107751399)


Basic Information

Item Value
gene id zpr1
gene name zpr1,LOC107693980,LOC107747003,LOC107751399
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 11749965 ~ 11754201 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250354.1
ATGATTCAAGCGGAAGTGAGGATATTCACAAAAACGTGCGAAAGCAGCTGGAAACTTCTAGCAGAACGCCGCTCGTTAAAAGCTAACCGCTTCTGTCAGTGATAAAGAGTGTCAATAGTTTTAAGCTGCAGTTCCTGGCAGGATGTCAGTTATTGAGGAGGAACGAATCCGCGGCGGGGTTTTTAAGGACATCAATGCAGAAGATGAAGATCAGCAACCCACAGTGATCGAGAGTTTGTGCATGAActgttatgaaaatGGAAGTACACGTCTGCTGCTTACTAAGATCCCTTTCTTCAAAGAAATCATTATCAGCTCCTTCACATGTCCTCACTGTAACTGGACCAATACAGAAATCCAGTCTGCTGGTCGGATCCAAGAGCAGGGTGTGCAGTACACCTTACAAGTGAAGGCCAAAGAGGACATGAACCGAGAGGTTGTGAAGTCTGACGCCGCATCCACCAGAATCCCACAGCTTGATTTTGAGATTCCTGCTTTCACGCAGAAGGGCTCTTTGTCAACGATTGAGGGCCTTCTGGACCGAGCAGTGGCGGGTTTAGAACAAGACCAGCCTATTAGaaagGCAACGGATCCAGCCGTAGCTGAAAAAATAGAGGAGTTCATCGAGAGGTTGAAAAAGCTTAAAGAAGTCGAAGAGGAATTCACATTAATTATCGACGATCCATCAGGAAACAGTTTTATCGAGAACCCATTTGCACCTCAGAAAGACGCGGCGCTCACTGTCGCTCATTACAAAAGGACGCCTGAACACAACTCTGCGCTAGGAATAGAGacggaggaagaagaagaagacagcGAAAAGCCCGGCAATGATCTAGACTCGATGAGAAATGAGGTATTAGTGTTCAACACAAACTGCCCAGAATGCAACTCCCCGGCCAATACAAACATGAAGCTTGTTCAAATCCCACACTTTAAAGAGGTCATTATAATGGCCACTAATTGTGACAGCTGTGGACATCGCACCAATGAGGTTAAATCGGGAGGAGCCACGGAAGAGCTGGGGACCAGAATAACGCTCCACTTAACCGACCCTTCAGATATGTCCAGAGACCTGCTGAAGTCGGAGACGTGCAGCGTGTTGATCCCAGAGCTGGAGTTTGAGTTGGGGATGGCGGCTCTCGGAGGGAAGTTCACTACGCTGGAAGGACTTCTCAAGGACATCAAAGACCTGaTTGTTTCGAAAAATCCTTTCATGTGTGGAGACAGCTCTACAGCAGATAGAGCTGAGAAACTGGAGCTCTTTGGGCAAAAGATTGACAAGataATAGCAGGGGAAATGGATGTTCACATTGTCCTGGATGATCCTGCTGGAAATAGTTATCTTCAGAATGTTTATGCACCAGATTTAGACCCAGAAATGAAGACGGAGAAGTACACCAGGACCTTTGAGCAGAATGAAGACTTGGGACTGAATGACATGAAAACTGAAGGGTACGCAGAGAAATAGGCTTAAAGTCGTAGAAAAATGGAGATTATATGTTATACACGCCAAATTCTGTCAAAgccgttatatatatatacgttatTTAATTCACTTTTACATGTATTGTAAAAATCCCATGTAATTACAACTTCTAAAAACCACAATGTCTTTTCAAGGCAGCGTTATGATTTGAGTAGaggaaaacattattttggctTAAGTGCAAGGCGCTGAATTTTCCTTGCTGTCTATAAAGTAATGTTTAAGTTATAAGTTTTGGTCATCTTGGCCATGAAGCCCTTGTGTTAAATACTGGAGTAACAACACAATTGTTACAACGTTTTTGAAGTACTTAAAACTACAGACGCTTAATAAAGTAGTCTTAAGCACACTGGATGTGATTTATGTGGCCGCTTCATTTCTTTTCCATGTAATTGGACTGACTCCTAAGTGCTGAAATGTAATAAGAGTTATGTTTGTACAATAAAACAGTATATGATAAGTATA

Function

symbol description
zpr1 Predicted to enable zinc ion binding activity. Predicted to be active in cytoplasm and nucleus. Orthologous to human ZPR1 (ZPR1 zinc finger).

NR:

description
zinc finger protein ZPR1-like

GO: NA

KEGG:

id description
K06874 K06874; zinc finger protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250354.1 True 1954 mRNA 0.43 13 11749965 11754201

Neighbor

gene id symbol gene type direction distance location
LOC122352762 hist2h2l,zgc:194989,LOC107719244,LOC108277172,LOC107667924,LOC103356012,LOC107574861 coding downstream 1908 11747207 ~ 11748057 (-)
si:ch73-261i21.5 LOC107588542,LOC107693981,LOC107747005,LOC107578992,LOC107691696,LOC107751407 coding downstream 5407 11731123 ~ 11744558 (-)
vps11 vps11,LOC107744603,LOC107691631,LOC107588528,LOC107693978,LOC107747034 coding downstream 30320 11713900 ~ 11719645 (-)
ift46 NA coding downstream 38367 11709431 ~ 11711598 (-)
tmem126a LOC107747013,LOC107744609,LOC107693976,LOC107691630 coding downstream 216960 11530837 ~ 11533005 (-)
bsx bsx,LOC107747047,LOC107589660,LOC107751411,LOC107579003 coding upstream 27295 11781496 ~ 11784153 (-)
lim2.1 lim2.1,LOC107579014,LOC107589671,LOC105028969,LOC105900331 coding upstream 32209 11786410 ~ 11787673 (-)
opcml opcml,LOC107746995,LOC107588660,LOC107686109,LOC107691701,LOC107751394,LOC107577150 coding upstream 311730 12065931 ~ 12186096 (-)
LOC122352422 pknox2,LOC107686111,LOC107691639,LOC107747045,LOC107686209,LOC107751409 coding upstream 462889 12217090 ~ 12283587 (-)
robo3 robo3,LOC107577175,LOC107751391,LOC107589390 coding upstream 556989 12311190 ~ 12430879 (-)
G76693 NA non-coding downstream 263537 11485906 ~ 11486428 (-)
G76657 NA non-coding downstream 459125 11218169 ~ 11290840 (-)
G76662 cblb,LOC107548831,LOC107699267,LOC107576804,LOC107693962,LOC107747038 non-coding downstream 514275 11234372 ~ 11235690 (-)
G76642 NA non-coding downstream 639130 11096963 ~ 11110835 (-)
G76627 NA non-coding downstream 658904 11087586 ~ 11091061 (-)
LOC122353234 NA non-coding upstream 694341 12448542 ~ 12453651 (-)
G76902 LOC107746985,LOC107751382 non-coding upstream 851018 12605219 ~ 12610098 (-)
G76912 NA non-coding upstream 924166 12678367 ~ 12678625 (-)
G77135 ppm1e,LOC107728886,LOC107686131,LOC107588822,LOC107734442,LOC107691656,LOC107577402 non-coding upstream 1042463 12796664 ~ 12880735 (-)
G77153 NA non-coding upstream 1267452 13021653 ~ 13103059 (-)
ccdc83 NA other downstream 165005 11505310 ~ 11584960 (-)
LOC122352715 LOC107693960,LOC107747020,LOC107744618,LOC107699265 other downstream 542713 11176569 ~ 11207252 (-)
G76625 NA other downstream 711234 11017110 ~ 11038731 (-)
rps6kb1a rps6kb1a,LOC107747022,LOC107548877,LOC107744622,LOC107699259,LOC107693887 other downstream 766227 10972881 ~ 10983738 (-)
G76498 NA other downstream 1269776 10478059 ~ 10480189 (-)
uvrag uvrag,LOC107691651,LOC107577365,LOC107686127,LOC107751378,LOC107589407 other upstream 924789 12678990 ~ 12769417 (-)
mogat2 mogat2,LOC107751377,LOC107691703,LOC107747029,LOC107686211,LOC107589716,LOC107579037 other upstream 1028152 12782353 ~ 12789095 (-)
dclk1a dclk1a,dclk1,LOC107588999,LOC107728871,LOC107577778 other upstream 1738072 13492273 ~ 13533064 (-)
sparta spg20,LOC107728829,LOC107589828,LOC107577790,LOC107697408 other upstream 1783955 13538156 ~ 13543615 (-)
ypel2a LOC106603438,LOC106931471,LOC106940241,LOC101067200,LOC107659943 other upstream 1888983 13643184 ~ 13654413 (-)

Expression


Co-expression Network