ccdc83


Basic Information

Item Value
gene id ccdc83
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 11505310 ~ 11584960 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU113507
tgcttcatttttttTTCTGTGGAAGCTGCACTTTATTTGAAAATCACCCAAATTctgcttcatttttttgtcatataaacaaaatataatctGCAGGGATGATGCAGTAAATATGCTAAATCAATGGATAGAATCGCCCTCATATTCGGACCACCTTTTGTGTACTTCCCTATTGGACAGGGCCTGTTTATGTACACAGGGCACTGATCAACAGCGCCCCCTTTTGTCACTTTATTGGACAGCTAGACACTACCGACCCCATCCCGATACTGACAGCAACCTGCGTTTCTTCCTCACATtcacattctctcacacacacacacacacacacacacacacacacacacaaaaatgatcTTCTCCCAGATGGCCCGAAAATGAAGGCGACTCTGCACATTCAGGTTGAAAAGGCAGCCATATAActgtcaaatgtaaaataatgacatGCCAAGCAGAAAGCAATACAGATCTTCCCCAAATGCAATGTCGCAGAATCACAAATGTAGTGCTTTGCTAAATGCTCTCTCACGAAAATGCACCCACCCGCTTAACCCCCCTCCCCGGGGCACAGAACTGACTATGTGGCATAATGAATTGTATATTTACTCCTATGTCCGTTACGAATGGAGGGCGGTGAGCGTTTGAGCTACAAAGAAATTGCACTAGACATAAAACTGCTTTTGAGAATACTTAGTGCTGTATCGGTCAGTTTATAGGTGTCCTTTTCCCCccaattttatattatatatattttttttataattcagtcACACAAAATCCGAATTATACAACCAATCATACCCATATGAATGCATAATTCGAAagacaaagttcaaaagaaaaaagaaaaaggatgattcatttctttcatgtcCTCAGTgggtaaatcataaataaatacagacaatACACAAGGAATGTCTACTGCAAACgtcataacataaaaaaagtagaaataataGAAACCGATGTTAGAATTTCTAATTGGTGATGGTTAAATCAGGTAATGCTTGATTGGTGATCGGATAAAGACAGAAGAAATCCCTCCCTGATCCCTCTTTTTGCATTCCATGGGAAAAAGTGAAGCTGTGTTTGCGTGAAAACCCACCACATTCCGGCACTGGCGCTCTCTCAACACCCACGTGTTTCGTTATAGACGGTACAATAACTTTTAGCGCGACAAATTACAAAATGAGCGCTGTGTCCTCCATCTCTCTGCAACAAGAGCC
>XM_043250114.1
CCGTCGCCCCCCTGTTTAGTTTCCTTGACAACGTGTAAACAAATCcggaaaaataaaagaaaattcataGAGCTCAAAGGAAAAATGAGCAAGACATTAAATACATCTCTGCCAGAGGCCTTCATACAGTTCCAAATTCAGCTTAAAAAGGAAGAGATTCAATATTTTGAGGAAGAAATACGCCAACTAGAAGATAAGAGGAAAAAACTCACAAAGCTGGCAAGTATCAACATTACGTTTGCGAAGATGAAGGGAAGACTAAACTCAAACGCGTGTCTGCAGCAGGAGCAGCTGAGAGAAGAGCACAGAGGTCATGTGCGTGAACTGCAGAAAAAGATGAAGGAGCAGGAGAGGAACCTGGAGCAAAGGCAGCGAGATGATGAAGAGCAGGTGGAGAACATGGCCCGGGAGGATCGGGAGCTAAAACACAAGCAAGAGGAAGAACTAGAAGAACTGCGGTGTGAGCTTGCAAGGCTGCGGGTGCAAGTGAAGGAACTGCAGGAGAAACAGCAGACATGGCTTCAGTATAAGAATGAGGACAGCATTAAAGACCGGCAAAAGATACAGAAACTGGAAAAAGACATTGCCTTAACAAAAAGGACTTTTCAGGAGATATCAGGATATTTTCAGAGGTCTCTGGTTGCGGCCGTTaatgaaaatgagcaaaaagtAGCACAGAGTTTAAAGGAAGGCATTCAGCTCGCCTTTGAGAGAGCATACAGAAACCTTAACCAGAATAGACTAGAGAATAAAAGCAACTGGCTAAAAAAAGAGGTTCGCCTATATACCGAGAAAGTTGCAGTGCTGGAATCCTCTGTCCAGAAGTTGGAAGAGGAGATCTTGGATCTTGTTTCCCTCAGCCCAGGCAGTGAGTTTCTTGCACAATCTGCTTGCCTTGGGTCCCATGGCACTCACAATATGGACAGGGACATAATGAAAATAAGCCCTGAGGAAACATCAGAGCTGGTCAACAGACCCTGGTGTCCCCTCCAACCATTAACAGAAGTGAAAGGGGCTCAGCAGAACAGCAAAGCGACCACAACAACTTCCGTCCCTCCTGACTTGAGCGAAATGTTCAGAGGTCAGACCGATTTAATGGGGCCGACGCATCTGGGCTCGCTGGAGCAGAAGCTGCTGTGGGTGATTGGTAAAGCATACCCCCTGCACCCACCTCCAAATGACCCCGTGGATATGGGAGAGgagatgacctttgacctgatGCAAAATGAAAAGTGGCCAGTTACAACAGGTCTAATACTTAGCAAGTTTAAACGGGCAAGTTCACAGTCTGGAGAAGCTGACAAATCCACAGACGACACCTGTGATATTTAGCAGTtggattaaaaattaaaacgcaAATGGTGAATAATTCCTATACACTGATAGCTTCATGCAGGCATAATTCTGTAAATGACAACTGTGAAATTCAGCAAACAATTTAAGCACTCCAAAAatttataaacaattatattaaattaagttatgCATCATGTCTatgtgatttgttttatatatacacatacatacatacatacatacatacacaccaaaaataacaaacacttAGTTCTGTGGAAGCTGCACTTTATTTGAAAATCACCCAAATTctgcttcatttttttgtcatataaacaaaatataatctGCAGGGATGATGCAGTAAATATGCTAAATCAATGGATAGAATCGCCCTCATATTCGGACCACCTTTTGTGTACTTCCCTATTGGACAGGGCCTGTTTATGTACACAGGGCACTGATCAACAGCGCCCCCTTTTGTCACTTTATTGGACAGCTAGACACTACCGACCCCATCCCGATACTGACAGCAACCTGCGTTTCTTCCTCACATtcacattctctcacacacacacacacacacacacacaca

Function

GO:

id name namespace
GO:1902562 H4 histone acetyltransferase complex cellular_component
GO:0043189 H4/H2A histone acetyltransferase complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113507 False 1229 lncRNA 0.40 2 11505310 11584960
XM_043250114.1 True 1891 mRNA 0.43 10 11506201 11510464

Neighbor

gene id symbol gene type direction distance location
zpld1a LOC107548885,LOC107693966,LOC107747018,LOC107744615,LOC107576843,LOC107699252 coding downstream 38472 11458833 ~ 11466838 (-)
si:ch211-103f14.3 LOC107693965,LOC107747051,LOC107548846,LOC107699269,LOC107744635,LOC107576832 coding downstream 47808 11452623 ~ 11457502 (-)
alcama alcama,LOC107548884,LOC107693963,LOC107576815,LOC107699268 coding downstream 154673 11290898 ~ 11350637 (-)
LOC122352716 LOC107576779 coding downstream 332996 11168125 ~ 11172314 (-)
LOC122352533 LOC107747056,LOC107693900,LOC107548843,LOC107548828 coding downstream 346576 11151111 ~ 11158734 (-)
ift46 NA coding upstream 124471 11709431 ~ 11711598 (-)
vps11 vps11,LOC107744603,LOC107691631,LOC107588528,LOC107693978,LOC107747034 coding upstream 128940 11713900 ~ 11719645 (-)
si:ch73-261i21.5 LOC107588542,LOC107693981,LOC107747005,LOC107578992,LOC107691696,LOC107751407 coding upstream 146163 11731123 ~ 11744558 (-)
LOC122352762 hist2h2l,zgc:194989,LOC107719244,LOC108277172,LOC107667924,LOC103356012,LOC107574861 coding upstream 162247 11747207 ~ 11748057 (-)
zpr1 zpr1,LOC107693980,LOC107747003,LOC107751399 coding upstream 165005 11749965 ~ 11754201 (-)
G76693 NA non-coding downstream 18882 11485906 ~ 11486428 (-)
G76657 NA non-coding downstream 214470 11218169 ~ 11290840 (-)
G76662 cblb,LOC107548831,LOC107699267,LOC107576804,LOC107693962,LOC107747038 non-coding downstream 269620 11234372 ~ 11235690 (-)
G76642 NA non-coding downstream 394475 11096963 ~ 11110835 (-)
G76627 NA non-coding downstream 414249 11087586 ~ 11091061 (-)
G76755 hspa8,LOC100305036,LOC101075813,LOC105019107,LOC107662768,LOC107693988 non-coding upstream 116911 11701871 ~ 11766210 (-)
LOC122353234 NA non-coding upstream 863582 12448542 ~ 12453651 (-)
G76902 LOC107746985,LOC107751382 non-coding upstream 1020259 12605219 ~ 12610098 (-)
G76912 NA non-coding upstream 1093407 12678367 ~ 12678625 (-)
G77135 ppm1e,LOC107728886,LOC107686131,LOC107588822,LOC107734442,LOC107691656,LOC107577402 non-coding upstream 1211704 12796664 ~ 12880735 (-)
LOC122352715 LOC107693960,LOC107747020,LOC107744618,LOC107699265 other downstream 298058 11176569 ~ 11207252 (-)
G76625 NA other downstream 466579 11017110 ~ 11038731 (-)
rps6kb1a rps6kb1a,LOC107747022,LOC107548877,LOC107744622,LOC107699259,LOC107693887 other downstream 521572 10972881 ~ 10983738 (-)
G76498 NA other downstream 1025121 10478059 ~ 10480189 (-)
G76438 NA other downstream 1122001 10380096 ~ 10383309 (-)
uvrag uvrag,LOC107691651,LOC107577365,LOC107686127,LOC107751378,LOC107589407 other upstream 1094030 12678990 ~ 12769417 (-)
mogat2 mogat2,LOC107751377,LOC107691703,LOC107747029,LOC107686211,LOC107589716,LOC107579037 other upstream 1197393 12782353 ~ 12789095 (-)
dclk1a dclk1a,dclk1,LOC107588999,LOC107728871,LOC107577778 other upstream 1907313 13492273 ~ 13533064 (-)
sparta spg20,LOC107728829,LOC107589828,LOC107577790,LOC107697408 other upstream 1953196 13538156 ~ 13543615 (-)
ypel2a LOC106603438,LOC106931471,LOC106940241,LOC101067200,LOC107659943 other upstream 2058224 13643184 ~ 13654413 (-)

Expression


Co-expression Network