G78500


Basic Information

Item Value
gene id G78500
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1590744 ~ 1593125 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU116164
CGTTCATCACAAAGTCTTACCCTTGTTCCCGGCTGATAGTTCTAGAGTTTGTGATTTGGACTGATCTCTGGTTtcctgattgtttgctgcctgcctcCTGGATCTCTCTGTCTGGACACTTCTTCTGCCTGGATTTACTGGAAGTCACTCCCTAAACGAGTCAGTTCTCCATTTCGAGACGGAGAGCTGAGGATCAAGGGTTGCCAGAAAGCAGTATGAAACTGACAATGAACCAGCCGTACAGCAAATGCATCTCGATGATGTTTGTGGCTGTGTTCGGTGTTTTGTGCGCAGCGGCATGCCCCGAGAACCACTTCCGAGCGGGAGATTCGTGCTGCTTGAACTGCCTAGAAGGGGAATATGTTGCCCATAACTGCTCCGATGGCCCCGGAGGACACACCGGAGTGCAGTGTAATCCATGCCGCAGATGTGAAGATACTGGAGAGATAACCGTGTCCGACTGCATGCAGTTCTCAGACGCACGGTGTGCCAGTGAGTATTGCTCATTTTCGtaataacatagcaataacattTCATCCTAAAAACATCTGTCGCAATTATGTTCGAAACGCACTTTTAGGCAGCTGAAGCGAAAGCATTAAGTGTGTTTTCCGTCTGAAATGTTTGTCACTAGACCAACTCTCAATCCTTAACATCGTCGTAGATGAGGTGCCTGTTTTTCAGATTGCATGCATCTCTGTACTACGTGCATACAGTCCAGCTAACACCCTTCTTTCGTTTGCCCTTAGGAAAAGTGCGTAAGATAACCTCGTACGAATGTGTGTGCGTGGCGGCCGTGGCGCTCTTCCTGGTGGTGATCGTGGCCACCTGCTTCTTTTGGAGAGTCAGTAAACCCGATGGAAGCTCTTCACgagAACCGTTACATATTTCCGAAGAAAAGATGCAAATAGTCTGAAAGATCTCAACTCTGGGGGAAAAACCCGGCaccaaacactttattttatcatttaacatttaaacgcaaaaaaatcacttatgtaatatttttatactttaaacatattttttttttcgcatttTTGGGAGAAAAAATGTCAAGGACCAGTTTTAAGTGCTGACTACCTTAATACAAATTGCGTAAAAGTAACTTTTACAGTTAAACTGAAAACGGTGCAAACTAGATGTAAAAGCAGCTCTAAAACGAGGACAgtcgtaaaaaaaaagtactattgttaatatgcatgctaataaacaactagttaatagtgagaattggcgCTGAACTATATAGGTGTGTGCACATCTGTTTATATTGATGGCGTATTTAGAAATGTatctatattaaaaacacacctgctgctcttttttttgtatttaaaaaaaaattggaatgtTTCTATAGTATCTATagtattttgtcatgttttgtaaGTTTATTACTCTTCTGCAagcagaaaaaagcaaaaagttacTGTGAATCTACAATGATTTAGACCGATATCTATGTGAACAAAATTTGTTCTGATGCAGCGTGATGTTTCTGACGATAGAACACCTTTAATGTGAACCGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116164 True 1534 TUCP 0.41 7 1590744 1593125

Neighbor

gene id symbol gene type direction distance location
hoxc6b LOC107551320,LOC107707362,LOC107660782 coding upstream 45980 1543622 ~ 1544764 (+)
hoxc13b NA coding upstream 52730 1536027 ~ 1538014 (+)
lrp1aa LOC107654787,LOC106565466 coding upstream 175945 1308673 ~ 1414799 (+)
LOC122354215 LOC107654785 coding upstream 289945 1291107 ~ 1300799 (+)
dtx3l2.2 LOC107654785 coding upstream 300540 1285110 ~ 1290204 (+)
lima1b LOC107707364,LOC107687370,LOC107754562,LOC107551335 coding downstream 8582 1601707 ~ 1618526 (+)
igfbp6a LOC107718979,LOC107687374,LOC107696018,LOC107730876,LOC107557535 coding downstream 38702 1631827 ~ 1633704 (+)
pip4k2cb pip4k2cb,LOC107730889,LOC107557542 coding downstream 42762 1635887 ~ 1643236 (+)
ube2v1 ube2v1,LOC107572061,LOC107683645,LOC105022328,LOC106572481,LOC103044311,LOC108425074 coding downstream 51773 1644898 ~ 1650340 (+)
csnk2a4 LOC107730901,LOC107683644,LOC107572060,LOC107696034,LOC104930306,LOC108424612,LOC103042686 coding downstream 57365 1650490 ~ 1657144 (+)
G78490 NA non-coding upstream 15619 1572594 ~ 1575125 (+)
G78484 NA non-coding upstream 28088 1558860 ~ 1562656 (+)
G78472 LOC107557538,LOC107681486,LOC107707358,LOC107551319 non-coding upstream 61587 1524347 ~ 1529157 (+)
G78471 LOC107551319 non-coding upstream 66666 1521976 ~ 1524078 (+)
G78479 NA non-coding upstream 76566 1513879 ~ 1514178 (+)
G78517 NA non-coding downstream 75897 1669022 ~ 1669695 (+)
G78540 NA non-coding downstream 173246 1766371 ~ 1766589 (+)
G78625 NA non-coding downstream 208226 1801351 ~ 1802313 (+)
G78652 LOC107550538,LOC107697642 non-coding downstream 305608 1898733 ~ 1899063 (+)
G78674 NA non-coding downstream 343735 1936860 ~ 1939086 (+)
rargb LOC107730622,LOC107681487,LOC107551317,LOC107681495,LOC107754558,LOC107557540,LOC108424631,LOC105907526 other upstream 72781 1485707 ~ 1517963 (+)
rbms2a rbms2,LOC107730618,LOC108424578,LOC107654803,LOC107565002,LOC107709509,LOC102312407,LOC107681488,LOC107551328 other upstream 141784 1419520 ~ 1448960 (+)
LOC122353696 LOC107670931,LOC107551313 other upstream 399023 1186866 ~ 1191721 (+)
cnbpb cnbpb,cnbp,LOC107742027,LOC107675970,LOC108431552,LOC106566283 other upstream 513345 1074707 ~ 1077399 (+)
tsen2 tsen2 other upstream 550505 1034409 ~ 1040239 (+)
G78506 inpp1,LOC107737355,LOC107683640,LOC107730897 other downstream 51506 1644631 ~ 1726097 (+)
nabp2 si:ch73-190f16.2,nabp2,LOC107572067,LOC107557546,LOC107683643,LOC107675336,LOC107737367,LOC106565411 other downstream 85101 1678226 ~ 1681200 (+)
G78763 NA other downstream 1085010 2678135 ~ 2680142 (+)
G78790 NA other downstream 1232414 2825539 ~ 2826794 (+)
camk2n1 si:dkey-33m11.6,LOC107572850,LOC107680422,LOC107555994,LOC107751034,LOC107714486,LOC107699327 other downstream 1677074 3270199 ~ 3272619 (+)

Expression


Co-expression Network