G79642


Basic Information

Item Value
gene id G79642
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 6825805 ~ 6829148 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU117813
cgacaagaatactttttgtatgcaaagaaaataaaaataactatatttaatcatttgtctTCACtgtagcgccattttggagTCAACTGAACACAAACTACGCACGCACTTCTGTCGGATGCGATATGTTTTCTATGCATATTTACGGtttgattttaacaaaaacagcaCACCCTTGAGTTGAggctgacacagaagagcatACGTAGTGTGTTCAGTGGATATTCTACAAAATGACACTACAGTTATGCATAAAGACACAGAAGAGACAAATTATTGCataaagtttttgaaaaaagtattccTTTCGcatcataaaatacagattcaaccactgatggcagatggactattctgacaatgtttttcatacttttctggaccttaaTAGTCCAGTTAGTTAataatgggacagtcacaagcctcccagtttttatccaaaatattttaaattgtgttcccaAGATGAACAAAGGGTAAGTGATTAAGTACACAATGATCATttgggtggagtaacccttttaAGTATGGTTTAACTGGTTCTGGGTCACTCACCTGACTCGGGCTGGGGTACGTGAACGATGGTGCTGCTGTAACTGCACTGGCTGGTGACAGACACCACGCTCATGGCCTCTGTGGAGATGGTGATGTCTGTAAGCGGCGCTCCCACCACCGCAGCCGTCGTAGCCGAACCCGCAGACACCTGACTGTCCAGAGCACCGGGGCCCTCCAAGGCTGCTTCTGCAGGACAGAGACGTCAGGACCTGCGTAGCTTTCAGGAACGTACAGGAAGGCTGGGAATGGACTTACCATCTGCGTTCACGGTGTCTTCATGTGCAACTGCTGCTGGTTTGTCTTCCTCAGACatggaggaagaagatgatGTAGCTATGGACAAAGATGCGCTCTTTCGTTTCAGAGCAGATGTGGCACAGCTCTCCAGATACCTagggaaagaaaaacacaaaactccATAATAGATCACTGGCTACTGGCCcaaatgaatgataaaataaaagatgtaaaaaaaaaaccatattttttaatatttagatttaaataaatatatcaaaaccttatttaaaatattaatatttatttgaaatttaaatgaattattatatacgtttttttatttgctatgtgatttaataatacaaaatcatatttttttaaaacaaattgctGGAATTTCCagacaaatataatattataatataatataagataTCTTTATGGATTTAAATcaactaattaaaatagaatGATTTTTTCTTTGCTTAATCCTAAACTACTTATTACTAAACTATTTTTTAGAAAGTAAACTTTATAATATaccttaaaacaaaatgcaaaactggaaaggaaaaaaaaatacatttattaatacattttattactacagaaaaacatttaatttgctgGATTGTTCAAAGataaacatcaacaaaaaaatctgaatttcacttgttttaagcaaaatgcaCTTAATTTCGATGTTTGTCACCTGGAAACAAGagtaaatatcttaaataatttAGCTTATCTAGTAAAagtatcttgatttaaaaagatttttagcatttttgtcttgttgaatatgtaaaattagccatttttgcagtgtacgtatatttaaacttatttaatcTCATCTATCTAATCCGGACTGCCTATGCAAATGAATGATCAGACTGAAGCTGACCTGATGATGCTGTCCACACAGTTGATCTGCTGGTAGGATGGAATGTGTGGCTGTTTCCGCGCTTCCTGTAGAGACTGCTTTACATGATCTCGAAGTCTCAAACCCTGACTAGTGTTACGATGAACGCCGGCTGTCGCCACTGCCCGGAACACACACCGCTCGACTACGATTACGTCAAAATGAGCCGACGAAACGACTGAAGacacataaagaaaaaacatgctCCAGACCTGCAGTGGCTGGTCCTAAAGGAGTGAGCTTCCTCCGGGAGTCCAGATACGCCTGCTGGCCCCAGTTCTTCACTTTATTCACATCAGCACAAAACTGCTGCAATGTCATCTACAAGGCAAAAGATCCGTCGTGAGGTCCAGGTAAACCAACATTCATATGCGACTTCACATGCACGCTCAGAAGTACCGGTTCTCTGTGCGAATCCTCCCAGAGGTTTCCGTTACTATCGCTGGACGACGCCACACTGATGTAGTGCTCATGAGAGCCGTTACTACCCAGACTGCCATAGCCACTGGATCCGTTATTATGAACCGGCTGAGAGAAATACAGATACAATCAAAACAGCTTTAGTGACGCCACAGCAGtcctgtttatttatattatagtttgTATTAATATTCTGGTAACCTAattttacctttatttctattttttttacaaagaaagcTCGCTAATGTGGCTCGTCCTTAGTAGATTTAGCGATCCCTCACCTGAAGAAAGAGCTTGTAAATCATGGCTTGCAGTTCTTTAACATCCTCACACATGATCGGCTGCTCGGCTTTACTCCGTGCAGCGAAAACGTCCTCGTTCAGAGGTCCACTACAGAGAAGGCACACAAAAACAAGTGCTTCTACGTGAGTGAACGTCAGCGTttagacaaacaaaacaacttgtAGGCTCCTGAGACGTGGCTTACGTGCGAACTTTGTGCCTGCCGATGATGAAGGCCACCTTACGGCTCCAAGGGTTGATGAAGCTGGACCAGCTGGAGTCCAGGGTGATGTAGTCGCCATTCTGACAGCGAAAGCGGATGGGCGAGTGTTCAAAGGGAGGCTGACCCGCGTACTTCAGAacTTTTGCGGTGCATGGCCAGCATGAGCAGGCGGTCATCTGGATGTAGG

Function

GO: NA

KEGG:

id description
ko04710 Circadian rhythm

RNA

RNA id representative length rna type GC content exon number start site end site
TU117813 True 2838 lncRNA 0.40 2 6825805 6829148

Neighbor

gene id symbol gene type direction distance location
uts2b LOC107592911,LOC107756623,LOC107654370,LOC107582468,LOC107751235,LOC107654437 coding upstream 7444 6814570 ~ 6818361 (+)
tnfrsf9b LOC107756612,LOC107654368,LOC107592895,LOC107756611 coding upstream 909946 5912515 ~ 5915859 (+)
fam83e LOC107654395,LOC107756647,LOC107592865,LOC107751172,LOC107582409,LOC107654433 coding upstream 913732 5902645 ~ 5912073 (+)
emp3a LOC107654369,LOC107582472,LOC107592909,LOC107654412,LOC107756650 coding upstream 923797 5897461 ~ 5902008 (+)
znf362a znf362a,LOC107756648,LOC107654396,LOC107592863,LOC107654432,LOC107582410,LOC108441419,LOC103024549 coding upstream 940739 5867816 ~ 5885066 (+)
LOC122353546 dnajc11,LOC107751176,LOC107654442,LOC107756609,LOC107592899 coding downstream 293232 7122380 ~ 7131443 (+)
fbxo2 zgc:175088,LOC107756640,LOC107751236,LOC107654389 coding downstream 317488 7146636 ~ 7153173 (+)
wnt4 wnt4a,wnt4,LOC107565731,LOC107654388,LOC107582399 coding downstream 421437 7250585 ~ 7262472 (+)
ap5b1 ap5b1,LOC107756637,LOC107654386,LOC107654446,LOC107751181,LOC107565726,LOC107580479 coding downstream 456904 7286052 ~ 7290309 (+)
p3h1 p3h1,LOC107756620,LOC107751183,LOC107654416,LOC107582441 coding downstream 466132 7295280 ~ 7303160 (+)
G79585 NA non-coding upstream 90996 6331984 ~ 6734809 (+)
G79605 NA non-coding upstream 93125 6724689 ~ 6732680 (+)
G79604 NA non-coding upstream 101791 6721624 ~ 6724014 (+)
G79594 NA non-coding upstream 252889 6568434 ~ 6572916 (+)
G79574 NA non-coding upstream 619057 6205759 ~ 6206748 (+)
G79646 NA non-coding downstream 5090 6834238 ~ 6838959 (+)
G79639 LOC107654393,LOC107592868,LOC107751174,LOC107654440 non-coding downstream 19219 6848367 ~ 6858586 (+)
G79659 LOC107592898,LOC107751174,LOC107592897,LOC107654393 non-coding downstream 40104 6869252 ~ 6871614 (+)
G79689 NA non-coding downstream 436095 7265243 ~ 7276347 (+)
G79690 NA non-coding downstream 449264 7278412 ~ 7280420 (+)
G79640 per3,LOC107751173,LOC107756610,LOC107654358 other upstream 1260 6818545 ~ 6824545 (+)
megf6b megf6b,megf6,LOC107712944,LOC107582451,LOC108431627,LOC107592884,LOC107657979 other upstream 1478973 5286439 ~ 5346832 (+)
samd13 samd13,LOC107592550 other upstream 2441826 4375839 ~ 4383979 (+)
prkacba prkacb,prkacba,LOC107745335,LOC107669012,LOC107592581 other upstream 2450417 4368425 ~ 4375388 (+)
adgrl2a adgrl2a,adgrl2 other upstream 2673214 4060929 ~ 4152591 (+)
elk4 LOC107751188,LOC107654379,LOC107756628,LOC107654450,LOC107582393,LOC107573300 other downstream 898639 7727787 ~ 7741441 (+)
bsnb LOC107743257,LOC107694876,LOC107579790,LOC107697600,LOC107751196,LOC107582388 other downstream 1246271 8075419 ~ 8150569 (+)
G79889 LOC107751201,LOC107697072,LOC107743253,LOC107578868,LOC107694869 other downstream 1451667 8280815 ~ 8282901 (+)
G80058 LOC107743242,LOC107659551,LOC107575478,LOC107685987,LOC107582425,LOC107751213 other downstream 1773039 8602187 ~ 8604284 (+)
G80095 grm2b,LOC107715788,LOC107575639,LOC107659540,LOC107718191,LOC107685980,LOC107582373 other downstream 1989242 8818390 ~ 8819279 (+)

Expression


Co-expression Network