fbxo2 (zgc:175088,LOC107756640,LOC107751236,LOC107654389)


Basic Information

Item Value
gene id fbxo2
gene name zgc:175088,LOC107756640,LOC107751236,LOC107654389
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 7146636 ~ 7153173 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043252898.1
GGAAGACTCATGGCCCTCATTCTGCCAACCAGAGAAGGTCTGCAGCGATCATATTACAGGAAGCTCTACAAAGCTCCCTCCCACCAGCAAACGCTCGGCTGACTCAGAGACAGACTCGGGGCTGCTCCTCGCACTTCACAGGAAACGCAGACATCTTTCAGATTCAACACAATGCCTGGAAACCTCATAAAAAATCCTAATGGAGACGAGGATCTGGGACACTGGGAGCTGACAGAGAATGGAGGCGATCAGTGGAGGACAGAGGACATGCCTGGGGACTGTGGACACGCTTTCAACGAAGAATCAATTACTAAATACTTCAGCACGTCTTTTGAGCCATGTATAAAAAGACAAGTGATTGACCTGCTGGCAGAGGGTTACGACCCTGAAAACTTAGATATCGCACAGCCAGCGGTATATGTGGAGGACTGGTACTGTAGCCGAACAGACTGCGGATGTATCTATAAGCTCACTGTGTCTCTGCTTGATGAAAGCCTAGATGTCATGCAAGAATTTAAGCCAGAAGAAGTGATTCTTAACCCCGACTGTGACGACTGCTCTTGGAAAAAGGTGAGCCACACATTCACGGATTACGGTCCAGGCCTTCGCTTCATCTCGTTTGAACATGGCGGTCAAGACACCAACTATTGGCAGGGCTGGTTTGGAGTGAGAGTGACTGGAAGCTTTGTTACAGTAGATCTCTAAACACCAATTACTCAAACTTATGATTGGTTATAAGACCAGGTATATTATTTCAGAGCTCGCTTTAGTTTTGCACATACGGCACTAGGTGTAACTAATATATAGCTGAAGATATACATTTAATGCTAGGCCTTAAAAAGAGCATcagattataatttattttttattttttttatcttggttCCTATTTCTGTGTAAGCACTAACTACCTCTATATGCCCCTGCAAACTATGCATtgagttattttacattaacaaCGCACTTTTAAAGATGTCTATGTGCAGTAGATCTTCAATTATCATGATCATAATCAACTCAACTATCAATGATAGTTCTGTATCATGcacactcaaaaataaaaaggagtGACAAAACA

Function

NR:

description
F-box only protein 2

GO:

id name namespace
GO:0030163 protein catabolic process biological_process

KEGG:

id description
K10099 FBXO2, NFB42; F-box protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043252898.1 True 1078 mRNA 0.43 6 7146636 7153173

Neighbor

gene id symbol gene type direction distance location
LOC122353546 dnajc11,LOC107751176,LOC107654442,LOC107756609,LOC107592899 coding upstream 15193 7122380 ~ 7131443 (+)
uts2b LOC107592911,LOC107756623,LOC107654370,LOC107582468,LOC107751235,LOC107654437 coding upstream 328275 6814570 ~ 6818361 (+)
tnfrsf9b LOC107756612,LOC107654368,LOC107592895,LOC107756611 coding upstream 1230777 5912515 ~ 5915859 (+)
fam83e LOC107654395,LOC107756647,LOC107592865,LOC107751172,LOC107582409,LOC107654433 coding upstream 1234563 5902645 ~ 5912073 (+)
emp3a LOC107654369,LOC107582472,LOC107592909,LOC107654412,LOC107756650 coding upstream 1244628 5897461 ~ 5902008 (+)
wnt4 wnt4a,wnt4,LOC107565731,LOC107654388,LOC107582399 coding downstream 97412 7250585 ~ 7262472 (+)
ap5b1 ap5b1,LOC107756637,LOC107654386,LOC107654446,LOC107751181,LOC107565726,LOC107580479 coding downstream 132879 7286052 ~ 7290309 (+)
p3h1 p3h1,LOC107756620,LOC107751183,LOC107654416,LOC107582441 coding downstream 142107 7295280 ~ 7303160 (+)
cldn19 cldn19,LOC107582397,LOC107751184,LOC107565733,LOC107654447 coding downstream 163276 7316449 ~ 7327237 (+)
LOC122354656 epha8,LOC107756634,LOC107565732,LOC107654383,LOC107582396,LOC107654448,LOC107751217 coding downstream 307819 7460992 ~ 7478381 (+)
G79659 LOC107592898,LOC107751174,LOC107592897,LOC107654393 non-coding upstream 275022 6869252 ~ 6871614 (+)
G79639 LOC107654393,LOC107592868,LOC107751174,LOC107654440 non-coding upstream 288050 6848367 ~ 6858586 (+)
G79646 NA non-coding upstream 307677 6834238 ~ 6838959 (+)
G79642 NA non-coding upstream 317488 6825805 ~ 6829148 (+)
G79605 NA non-coding upstream 413956 6724689 ~ 6732680 (+)
G79689 NA non-coding downstream 112070 7265243 ~ 7276347 (+)
G79690 NA non-coding downstream 125239 7278412 ~ 7280420 (+)
G79707 NA non-coding downstream 196362 7349535 ~ 7372373 (+)
G79706 epha8,LOC107654448,LOC107751217,LOC107582396,LOC107654383,LOC107565732 non-coding downstream 219739 7372912 ~ 7375674 (+)
LOC122354645 NA non-coding downstream 333037 7486210 ~ 7498189 (+)
G79640 per3,LOC107751173,LOC107756610,LOC107654358 other upstream 322091 6818545 ~ 6824545 (+)
megf6b megf6b,megf6,LOC107712944,LOC107582451,LOC108431627,LOC107592884,LOC107657979 other upstream 1799804 5286439 ~ 5346832 (+)
samd13 samd13,LOC107592550 other upstream 2762657 4375839 ~ 4383979 (+)
prkacba prkacb,prkacba,LOC107745335,LOC107669012,LOC107592581 other upstream 2771248 4368425 ~ 4375388 (+)
adgrl2a adgrl2a,adgrl2 other upstream 2994045 4060929 ~ 4152591 (+)
elk4 LOC107751188,LOC107654379,LOC107756628,LOC107654450,LOC107582393,LOC107573300 other downstream 574614 7727787 ~ 7741441 (+)
bsnb LOC107743257,LOC107694876,LOC107579790,LOC107697600,LOC107751196,LOC107582388 other downstream 922246 8075419 ~ 8150569 (+)
G79889 LOC107751201,LOC107697072,LOC107743253,LOC107578868,LOC107694869 other downstream 1127642 8280815 ~ 8282901 (+)
G80058 LOC107743242,LOC107659551,LOC107575478,LOC107685987,LOC107582425,LOC107751213 other downstream 1449014 8602187 ~ 8604284 (+)
G80095 grm2b,LOC107715788,LOC107575639,LOC107659540,LOC107718191,LOC107685980,LOC107582373 other downstream 1665217 8818390 ~ 8819279 (+)

Expression


Co-expression Network