G81059


Basic Information

Item Value
gene id G81059
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11637405 ~ 11648112 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU119935
GCTGAACATTGACCGCTGCCTTCAGGCCATGCCGTTTCCATGGATCCGTCAGCAAACCCAGAATCCGAATCCGGTTGTCATGGAGATTCCTGAATCCCTGACTTTATCTGAGGAGATAATCGGTGTTTCCGACGAGCTCCGTTCCTCTCAGACTTCCTTCAGCTCTTCCCGCCGCCGGGACGCACGAAGCAGGTGTCCGtgggggtttccatagcaacaCGTGTCATTCCAGGCTGCCCATCTGGAGCTGAGAGTGAACTCACC
>TU119936
GCTGAACATTGACCGCTGCCTTCAGGCCATGTCATCCTGTAACACGCGTGTTTTTGGCTGACGCTGGTGTCTCTTACTGCCCAAAAAGACACAAAGCGCGCGAGGAGAAGCATCTGCCCGTCTCATTTCAGAGTAACGGACCGAGTCGGCCTCGAAGCCGTGTttcagccgtgtctcgttaaCCTCCCATCCATCCCAGATCAAAGATGGCCGCTCGGAGATCAGCTGTTGCGCGGCGGTTGCACCATCGCTTGAGCCCAAACATGAGAGCGTTTTCTCacacatcttaaaatatgtataaagaCGATTTCACAGAGCTGCCGGGCAAACGGAGCGCCGAGGCGCAGAGGGAGGATACACATCACAGCCGAGCCAAGAACGTCCACTAAAAAATCAATGCAGAGAGGCTGTTTGCTGCTCTATGAGGCAA

Function

GO:

id name namespace
GO:0044427 obsolete chromosomal part cellular_component
GO:0070013 intracellular organelle lumen cellular_component
GO:0044454 obsolete nuclear chromosome part cellular_component
GO:0000228 nuclear chromosome cellular_component
GO:0031974 membrane-enclosed lumen cellular_component
GO:0005694 chromosome cellular_component
GO:0043233 organelle lumen cellular_component

KEGG:

id description
ko03440 Homologous recombination

RNA

RNA id representative length rna type GC content exon number start site end site
TU119935 False 264 lncRNA 0.56 2 11637405 11648112
TU119936 True 430 lncRNA 0.53 2 11645822 11648112

Neighbor

gene id symbol gene type direction distance location
cfap410 cunh21orf2,LOC107713232,LOC107564578,LOC107713238 coding downstream 132960 11499911 ~ 11504445 (-)
LOC122353939 si:dkey-93h22.8,LOC107701852,LOC107567634,LOC107713247 coding downstream 180785 11444822 ~ 11456620 (-)
ogal mgea5l,LOC107726775,LOC107567635,LOC107700507 coding downstream 193836 11434329 ~ 11443569 (-)
tk1 tk1,LOC107713239,LOC107726782,LOC107577227 coding downstream 220154 11405002 ~ 11417251 (-)
tmc6b tmc6,LOC107564572 coding downstream 263569 11353083 ~ 11373836 (-)
irf2bp2b irf2bp2b,LOC107713243,LOC107564749,LOC107567632,LOC107740065,LOC107683260 coding upstream 8866 11656978 ~ 11661044 (-)
rbm34 rbm34,LOC107661158 coding upstream 53050 11701162 ~ 11705953 (-)
LOC122353888 LOC107713227,LOC107661162,LOC107740077,LOC107564753,LOC107574184,LOC107558365 coding upstream 69150 11717262 ~ 11752522 (-)
gnb4b gnb4,LOC107701549,LOC107552407,LOC108270972 coding upstream 164458 11812570 ~ 11822791 (-)
LOC122353870 LOC107661166 coding upstream 208227 11856339 ~ 11859155 (-)
G81049 NA non-coding downstream 33151 11601912 ~ 11604254 (-)
G81046 NA non-coding downstream 39077 11597858 ~ 11598328 (-)
G80961 NA non-coding downstream 60636 11523212 ~ 11576769 (-)
G81074 NA non-coding upstream 32466 11680578 ~ 11685006 (-)
G81075 NA non-coding upstream 35348 11683460 ~ 11683946 (-)
G81093 LOC107703026,LOC107740081,LOC107558369,LOC107713226 non-coding upstream 107512 11755624 ~ 11759407 (-)
G81097 NA non-coding upstream 136168 11784280 ~ 11786988 (-)
G81158 clcn4,LOC107552404,LOC107705120,LOC107702352,LOC107558374,LOC107740070,LOC106517624,LOC104959943 non-coding upstream 227376 11875488 ~ 11877649 (-)
strn strn,LOC107702041,LOC107701064,LOC108430145,LOC107713228,LOC108271087 other downstream 5718 11536500 ~ 11631687 (-)
G80956 NA other downstream 218075 11403644 ~ 11419330 (-)
LOC122354635 NA other downstream 242529 11390592 ~ 11394876 (-)
mafgb mafgb,mafg,mafga,LOC107564557,LOC107702026,LOC107657334,LOC108437166,LOC106533856,LOC107739593,LOC103140971,LOC106920092,LOC107376449 other downstream 351187 11263332 ~ 11286218 (-)
si:ch73-100l22.3 NA other downstream 376111 11251255 ~ 11261294 (-)
ero1b ero1b other upstream 118719 11766831 ~ 11780809 (-)
G81192 NA other upstream 425484 12073596 ~ 12074075 (-)
G81318 NA other upstream 797748 12445860 ~ 12447287 (-)
hesx1 hesx1,LOC107712966,LOC107657957,LOC107557393,LOC107680467 other upstream 1015719 12663831 ~ 12667588 (-)
G81512 NA other upstream 1169641 12817753 ~ 13057881 (-)

Expression


Co-expression Network