LOC122354635


Basic Information

Item Value
gene id LOC122354635
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11390592 ~ 11394876 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU119841
GTCCAGTCCCTTGCTGAACGAGCTCTCGATGTCCGTGTTGTTGTGTCCGCTGACCTTACAGATGATCCGGCCGTCGTGTTTTTGCGTGATGACATGAAAAAAAGTGGCGGGATTTTCGGACAGCGAGGAGTACTCTCCGATCAACCTACCCGGGTCCGACTCGACGTAAAGCTCGTACTGGACGGACAGGTTGACTGGCTTCCCGGGAAGCTCACAGTAGAATTCCACCACCGAGCCGGCTAAAGCAGAAGACGGGCCCGTCAGATCCGGCTCGGCCAGCTTTTCCAGAGCGCCTGTGACAGAGAAGGGTTTAGATGCAGTGCTGCAGTGCAACCACTTCAGTGAGTTTATCCTGAATGACATGCATTGCATTCAAGACCGCAGCGTGTTTAAAGGATCACATACTATATAATTCAACACAAAACGACACGCATTGCATGCAATATATCCATTCATATGCATCCCCTCGAAACCAAAAGCCATGCCGCTCAACATATAATCAGTACTGTCTGTAAAGTATCTAGAAAGTCACTCACCCGTCCTTGGATGCGAAAGCGAGATAGCTGGTGGGAAATAAGAAGCACATGAAAACACTTCAACGAACTCGAGAAAACACCATGGAGAGCGTGAAACGTTTGCTCTACCTGTGAGGATGAGCGCCAGACGCCAGGTTTCCATCCTCGCTGAAGAACCACCAGAGAAAGAGCTCGGTGAAAGCAGGACGAGGACGAAGCGGTCGAGAGCCTCCCCGAGCAGAGCGTGTGTTCAGCACAGATAAGACAGGGACAGGGTGTTTGTCTGACTGGAAATCTCCTCGTTCAAGACGTTCGTTGAAGTTTACACACTTTTATAGCGAGGAGAACATTTTCAGGATGGCTTCGTTAAAAACAGTGCAACTAAAGCTTTTTGGAGCGAGAACCCTGTAGACTCAACCTTCCCGTTTCCACGGCAACCAAAAAAACAGACTGATCATCAGAAGGTTCAGAGGAAACACCGGCTGCTGGAAATCTTCAGAGACGGACAGAAGAGAGATTAAAAGCGCTCTTTCTGCCCGAAGGAAGCTTCAGAGAGACTGAAACCAGACTCACGTTCTCATCATCTCAGACTGGATCACATCCTctgacaaaaagagagagacgaACATGAACGTGACGCTCTGACACAAAACATGCGCAGGGCTTGAAAtatgttgaaatatataaaaacatcatggtaacattttattttattatttcgcAAACATTATATTCTCTGAACCATCTGGAGATAGTATTGATATTTGAAAAGTTAGACATGTTTATCTAAAGAGTTCTAGTTCTGCTCAGCTATTTGATCtaaaaaagcagtaatattgtgaagtatatctgttttctctgtgaatgtattaaagtgtcatttattcatgtattttcagcatctttcttcagcgtcacatgatcttcagaaatcataataatatactgatttactgcgtGAGAAACATTTATTGACTGGAAGTGTAAATAATACTGATGTGTtaagaacattattaaaaacaactctaaaaataaaaaacgtttCCAGAAAAGTAGTTCCAATCCAGTATTAACCTTTAAAAAAGTTAGACAAACATTcaacatttcagaaatattattCTTGAACGATTTATAAATGATCTTACCACTCGAGGAAATT
>TU119842
GTCCAGTCCCTTGCTGAACGAGCTCTCGATGTCCGTGTTGTTGTGTCCGCTGACCTTACAGATGATCCGGCCGTCGTGTTTTTGCGTGATGACATGAAAAAAAGTGGCGGGATTTTCGGACAGCGAGGAGTACTCTCCGATCAACCTACCCGGGTCCGACTCGACGTAAAGCTCGTACTGGACGGACAGGTTGACTGGCTTCCCGGGAAGCTCACAGTAGAATTCCACCACCGAGCCGGCTAAAGCAGAAGACGGGCCCGTCAGATCCGGCTCGGCCAGCTTTTCCAGAGCGCCTGTGACAGAGAAGGGTTTAGATGCAGTGCTGCAGTGCAACCACTTCAGTGAGTTTATCCTGAATGACATGCATTGCATTCAAGACCGCAGCGTGTTTAAAGGATCACATACTATATAATTCAACACAAAACGACACGCATTGCATGCAATATATCCATTCATATGCATCCCCTCGAAACCAAAAGCCATGCCGCTCAACATATAATCAGTACTGTCTGTAAAGTATCTAGAAAGTCACTCACCCGTCCTTGGATGCGAAAGCGAGATAGCTGGTGGGAAATAAGAAGCACATGAAAACACTTCAACGAACTCGAGAAAACACCATGGAGAGCGTGAAACGTTTGCTCTACCTGTGAGGATGAGCGCCAGACGCCAGGTTTCCATCCTCGCTGAAGAACCACCAGAGAAAGAGCTCGGTGAAAGCAGGACGAGGACGAAGCGGTCGAGAGCCTCCCCGAGCAGAGCGTGTGTTCAGCACAGATAAGACAGGGACAGGGTGTTTGTCTGACTGGAAATCTCCTCGTTCAAGACGTTCGTTGAAGTTTACACACTTTTATAGCGAGGAGAACATTTTCAGGATGGCTTCGTTAAAAACAGTGCAACTAAATTCATCCACTTCTGGTCCGGCGCACATGATGGACAAACACCGCTGTATTTGacaattatttccattttatcaACCAGCAATAAAGTCTCTTTTTGGCACTTCATGGAGCGAGTTTAGCCACAGCACAACCTACTggtgtaaaattattaaaaaatcatCAACGGAGGGCTTTTTTAGGTTTTACTCCCCTTATTTCATCAAGCGATCccaaaataaattcttaaatttCAGAGCTTTTTGGAGCGAGAACCCTGTAGACTCAACCTTCCCGTTTCCACGGCAACCAAAAAAACAGACTGATCATCAGAAGGTAcgttaaaagataaaatacagCTTACCTAAAACaatcatgttttaataataagagCTTGTAAACAATAACCTCACATCCAGAAACGCTGAGCGTAACTCTATATAATTCAGCTTGAACTCTACAGAGCGGCGTTTTGATGAATACATTCataatgtctttattatttCACTTCACAAAGCCCTTTTAACGGTACAGTGTCGATAatgcaaaatgataataatttgaataaatatttttatgacagCCGCTGTTTAAAAGATTAGATTTCAAGAACCAGTACAACTATGTAATTAAACGTCCTCATGAGAGATGTTTCGTGTCTCCGTCAggaaaagcttttatttgttaCGTAAAAGTCTGGAAAGTGGCACAGTAGGGATTGAAATCCAGTCCTTTATTAagcacacctgaaccagctaaccAGAGGATTACTAGAATCTTCAAGACGTCTCTGCGGTCAAGTCCGGTCCGGTccggtctggtctggtctggtctggtctgctCCAGTCttgtctggtctggtctggtccgGTCTGGTccggtctggtctggtctggtctggtctggtctggtccgGTCTGGTCTGCTccggtctggtctggtctgctCCAGTCttgtctggtctggtctggtctggtccgGTCCGGTccggtctggtctggtctggtctggtctggtctggtctggtctggtccgGTCCGGTCTGGTCTGGTCCGGTCCAGTCCGGTCTAGACTAGGCCTCAAGCTCCACGATGACCGTTTTCATTTCCACAGGTTCAGAGGAAACACCGGCTGCTGGAAATCTTCAGAGACGGACAGAAGAGAGATTAAAAGCGCTCTTTCTGCCCGAAGGAAGCTTCAGAGAGACTGAAACCAGACTCACGTTCTCATCATCTCAGACTGGATCACATCCTctgacaaaaagagagagacgaACATGAACGTGACGCTCTGACACAAAACATGCGCAGGGCTTGAAAtatgttgaaatatataaaaacatcatggtaacattttattttattatttcgcAAACATTATATTCTCTGAACCATCTGGAGATAGTATTGATATTTGAAAAGTTAGACATGTTTATCTAAAGAGTTCTAGTTCTGCTCAGCTATTTGATCtaaaaaagcagtaatattgtgaagtatatctgttttctctgtgaatgtattaaagtgtcatttattcatgtattttcagcatctttcttcagcgtcacatgatcttcagaaatcataataatatactgatttactgcgtGAGAAACATTTATTGACTGGAAGTGTAAATAATACTGATGTGTtaagaacattattaaaaacaactctaaaaataaaaaacgtttCCAGAAAAGTAGTTCCAATCCAGTATTAACCTTTAAAAAAGTTAGACAAACATTcaacatttcagaaatattattCTTGAACGATTTATAAATGATCTTACCACTCGAGGAAATT
>TU119843
GCAAGCTAAATAATCTGCACAATCCCTTGGGCATCATTTCAAATCGCCTTGATTAaagaatttttagatattttgcctgaaaacaagacaacaaAATAAACCTAGGCttgaaaacccttttttttgcagcgtgaaaattcagctttgcgtcacagaaatatattacagtttaaaacatCCTCGCCCAGCAAACGCTTCTTTTgaactgcaataatatttcacatttttatagtattttcatcaaataaatgcagctttaggAGGCTCGTGAAAGCACTGAACGTCTCGTCAGCGCACCTTTGATGTGGACGGTCAGGTTAGCGCTGGACGTGAAGGTGGCCGTATCGTTGTGGTTGGACGCCACACATTTATAATCGCCTGCGTTTTGCTCAGAGACCCTGTGGATGGTCAGAGTGTCTTCATTCCTGTCGTACGGCGTCCGAACCGGAGCGTCGTTCCAGAACCAGTCGTACGAGACGTACGTTCCTCTGCTTTTCTTGCACTGGAGCGTCAAAGTCTGTCCTTCCCACACGCTCCAAAGAGAAAGACGAGAAAGGATGCTCTCCAGCTCCACTGGAACTACGATGACCCTGAAGTCCAGTCCCTTGCTGAACGAGCTCTCGATGTCCGTGTTGTTGTGTCCGCTGACCTTACAGATGATCCGGCCGTCGTGTTTTTGCGTGATGACATGAAAAAAAGTGGCGGGATTTTCGGACAGCGAGGAGTACTCTCCGATCAACCTACCCGGGTCCGACTCGACGTAAAGCTCGTACTGGACGGACAGGTTGACTGGCTTCCCGGGAAGCTCACAGTAGAATTCCACCACCGAGCCGGCTAAAGCAGAAGACGGGCCCGTCAGATCCGGCTCGGCCAGCTTTTCC
>TU119845
GTCCAGTCCCTTGCTGAACGAGCTCTCGATGTCCGTGTTGTTGTGTCCGCTGACCTTACAGATGATCCGGCCGTCGTGTTTTTGCGTGATGACATGAAAAAAAGTGGCGGGATTTTCGGACAGCGAGGAGTACTCTCCGATCAACCTACCCGGGTCCGACTCGACGTAAAGCTCGTACTGGACGGACAGGTTGACTGGCTTCCCGGGAAGCTCACAGTAGAATTCCACCACCGAGCCGGCTAAAGCAGAAGACGGGCCCGTCAGATCCGGCTCGGCCAGCTTTTCCAGAGCGCCTGTGACAGAGAAGGGTTTAGATGCAGTGCTGCAGTGCAACCACTTCAGTGAGTTTATCCTGAATGACATGCATTGCATTCAAGACCGCAGCGTGTTTAAAGGATCACATACTATATAATTCAACACAAAACGACACGCATTGCATGCAATATATCCATTCATATGCATCCCCTCGAAACCAAAAGCCATGCCGCTCAACATATAATCAGTACTGTCTGTAAAGTATCTAGAAAGTCACTCACCCGTCCTTGGATGCGAAAGCGAGATAGCTGGTGGGAAATAAGAAGCACATGAAAACACTTCAACGAACTCGAGAAAACACCATGGAGAGCGTGAAACGTTTGCTCTACCTGTGAGGATGAGCGCCAGACGCCAGGTTTCCATCCTCGCTGAAGAACCACCAGAGAAAGAGCTCGGTGAAAGCAGGACGAGGACGAAGCGGTCGAGAGCCTCCCCGAGCAGAGCGTGTGTTCAGCACAGATAAGACAGGGACAGGGTGTTTGTCTGACTGGAAATCTCCTCGTTCAAGACGTTCGTTGAAGTTTACACACTTTTATAGCGAGGAGAACATTTTCAGGATGGCTTCGTTAAAAACAGTGCAACTAAATTCATCCACTTCTGGTCCGGCGCACATGATGGACAAACACCGCTGTATTTGacaattatttccattttatcaACCAGCAATAAAGTCTCTTTTTGGCACTTCATGGAGCGAGTTTAGCCACAGCACAACCTACTggtgtaaaattattaaaaaatcatCAACGGAGGGCTTTTTTAGGTTTTACTCCCCTTATTTCATCAAGCGATCccaaaataaattcttaaatttCAGAGCTTTTTGGAGCGAGAACCCTGTAGACTCAACCTTCCCGTTTCCACGGCAACCAAAAAAACAGACTGATCATCAGAAGGTTCAGAGGAAACACCGGCTGCTGGAAATCTTCAGAGACGGACAGAAGAGAGATTAAAAGCGCTCTTTCTGCCCGAAGGAAGCTTCAGAGAGACTGAAACCAGACTCACGTTCTCATCATCTCAGACTGGATCACATCCTctgacaaaaagagagagacgaACATGAACGTGACGCTCTGACACAAAACATGCGCAGGGCTTGAAAtatgttgaaatatataaaaacatcatggtaacattttattttattatttcgcAAACATTATATTCTCTGAACCATCTGGAGATAGTATTGATATTTGAAAAGTTAGACATGTTTATCTAAAGAGTTCTAGTTCTGCTCAGCTATTTGATCtaaaaaagcagtaatattgtgaagtatatctgttttctctgtgaatgtattaaagtgtcatttattcatgtattttcagcatctttcttcagcgtcacatgatcttcagaaatcataataatatactgatttactgcgtGAGAAACATTTATTGACTGGAAGTGTAAATAATACTGATGTGTtaagaacattattaaaaacaactctaaaaataaaaaacgtttCCAGAAAAGTAGTTCCAATCCAGTATTAACCTTTAAAAAAGTTAGACAAACATTcaacatttcagaaatattattCTTGAACGATTTATAAATGATCTTACCACTCGAGGAAATT
>XR_006252136.1
AGCACAGATAAGACAGGGACAGGGTGTTTGTCTGACTGGAAATCTCCTCGTTCAAGACGTTCGTTGAAGTTTACACACTTTTATAGCGAGGAGAACATTTTCAGGATGGCTTCGTTAAAAACAGTGCAACTAAATTCATCCACTTCTGGTCCGGCGCACATGATGGACAAACACCGCTGTATTTGacaattatttccattttatcaACCAGCAATAAAGTCTCTTTTTGGCACTTCATGGAGCGAGTTTAGCCACAGCACAACCTACTggtgtaaaattattaaaaaatcatCAACGGAGGGCTTTTTTAGGTTTTACTCCCCTTATTTCATCAAGCGATCccaaaataaattcttaaatttCAGAGCTTTTTGGAGCGAGAACCCTGTAGACTCAACCTTCCCGTTTCCACGGCAACCAAAAAAACAGACTGATCATCAGAAGGTTCAGAGGAAACACCGGCTGCTGGAAATCTTCAGAGACGGACAGAAGAGAGATTAAAAGCGCTCTTTCTGCCCGAAGGAAGCTTCAGAGAGACTGAAACCAGACTCACGTTCTCATCATCTCAGACTGGATCACAT

Function

GO:

id name namespace
GO:0019825 oxygen binding molecular_function
GO:0035379 carbon dioxide transmembrane transporter activity molecular_function

KEGG:

id description
ko04640 Hematopoietic cell lineage

RNA

RNA id representative length rna type GC content exon number start site end site
TU119841 False 1674 lncRNA 0.43 3 11390592 11393645
TU119842 True 2683 lncRNA 0.43 2 11390592 11393645
TU119843 False 881 TUCP 0.49 2 11393360 11394876
TU119845 False 1906 lncRNA 0.42 3 11390592 11393645
XR_006252136.1 False 581 lncRNA 0.43 3 11391150 11392878

Neighbor

gene id symbol gene type direction distance location
tmc6b tmc6,LOC107564572 coding downstream 16756 11353083 ~ 11373836 (-)
aspscr1 aspscr1,LOC107726919,LOC107572045 coding downstream 52960 11320381 ~ 11337632 (-)
LOC122353684 NA coding downstream 72030 11314566 ~ 11318562 (-)
pycr1b pycr1,pycr1b,LOC107572052,LOC107564555,LOC108443889 coding downstream 88640 11291419 ~ 11301952 (-)
srsf11 srsf11,LOC103035453,LOC107101867 coding downstream 163965 11217681 ~ 11226627 (-)
tk1 tk1,LOC107713239,LOC107726782,LOC107577227 coding upstream 10126 11405002 ~ 11417251 (-)
ogal mgea5l,LOC107726775,LOC107567635,LOC107700507 coding upstream 39453 11434329 ~ 11443569 (-)
LOC122353939 si:dkey-93h22.8,LOC107701852,LOC107567634,LOC107713247 coding upstream 49946 11444822 ~ 11456620 (-)
cfap410 cunh21orf2,LOC107713232,LOC107564578,LOC107713238 coding upstream 105035 11499911 ~ 11504445 (-)
irf2bp2b irf2bp2b,LOC107713243,LOC107564749,LOC107567632,LOC107740065,LOC107683260 coding upstream 262102 11656978 ~ 11661044 (-)
G81018 LOC107564562,LOC107702029,LOC107713253 non-coding downstream 3539 11384376 ~ 11387053 (-)
G80965 NA non-coding downstream 140040 11249954 ~ 11250552 (-)
G80987 NA non-coding downstream 141419 11230185 ~ 11249173 (-)
G80989 NA non-coding downstream 151395 11238591 ~ 11239197 (-)
G80964 NA non-coding downstream 176124 11210953 ~ 11214468 (-)
G81023 NA non-coding upstream 63562 11458438 ~ 11464719 (-)
G81025 NA non-coding upstream 74479 11469355 ~ 11469584 (-)
G81029 NA non-coding upstream 91664 11486540 ~ 11489994 (-)
G81033 NA non-coding upstream 110784 11505660 ~ 11507769 (-)
G81034 NA non-coding upstream 116598 11511474 ~ 11511863 (-)
mafgb mafgb,mafg,mafga,LOC107564557,LOC107702026,LOC107657334,LOC108437166,LOC106533856,LOC107739593,LOC103140971,LOC106920092,LOC107376449 other downstream 104374 11263332 ~ 11286218 (-)
si:ch73-100l22.3 NA other downstream 129298 11251255 ~ 11261294 (-)
srsf7b srsf7,LOC107665899,LOC107693014 other downstream 245522 11136170 ~ 11145070 (-)
LOC122354338 LOC107698785 other downstream 393139 10993300 ~ 10997453 (-)
LOC122353594 rfc4 other downstream 624755 10762491 ~ 10765837 (-)
G80956 NA other upstream 8768 11403644 ~ 11419330 (-)
strn strn,LOC107702041,LOC107701064,LOC108430145,LOC107713228,LOC108271087 other upstream 141624 11536500 ~ 11631687 (-)
ero1b ero1b other upstream 371955 11766831 ~ 11780809 (-)
G81192 NA other upstream 678720 12073596 ~ 12074075 (-)
G81318 NA other upstream 1050984 12445860 ~ 12447287 (-)

Expression


Co-expression Network