G81762


Basic Information

Item Value
gene id G81762
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 14536613 ~ 14618947 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU121014
GAGTTTATATACTTGCAAGACCTACTAATAAAGGTGGGACAAAGTTTCTCTATTGCATGCTGGGATAACGAAGCATAAAATAAGCTGAAGTTCTGAATTTTGCCTCGCCACATCTTTTTACATGTCTATTTGTGTCTTTGACAAACCAGATAAATAGAACCTTTAACTGAAAATCCTCTTTAGTGTGAAACAAACCACCTCTTGCATACTCtatgcaaaatcatttttttttttttcagtaaaccATATATATTTCCAGCAACTTCTtgatgtgtatattttaaatggcaaGGGAATTGAAGTAGTCTGCGGATCTTCAagtcaaatgcaaatgttttgcatCTGCAGTGTGTCCCAGCAGTGACTACTGCACTACGAGCCTTTTCTAAGGCCTGGCCACATGGTGGTGCTATAGCATTACACAGAAAACTGGCAGCAGCTGCTCATAACAAAAATAAGCATTATGCAATCTTTCAAGATATCAGCCTCCTCACAATTGTGTAGACACCAACTGAAAAGATGGAACAAAACTTTATAGTGCAACTTCACATTTAACATTACCTTCAACATCAAGATTTAAGCAAATTCACAAATGCCTCATCTTTGGCCTCTGAGCTTTTTTTAAttttacttttaatttt

Function

GO:

id name namespace
GO:0016070 RNA metabolic process biological_process
GO:0006396 RNA processing biological_process

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU121014 True 641 lncRNA 0.36 2 14536613 14618947

Neighbor

gene id symbol gene type direction distance location
atp5f1b atp5b,LOC102199207,LOC100693141 coding upstream 249 14532740 ~ 14536364 (+)
LOC122354141 NA coding upstream 4366 14527668 ~ 14532247 (+)
mknk1 mknk1,LOC107753831,LOC107723060,LOC107655971,LOC107602795 coding upstream 9086 14519910 ~ 14527527 (+)
mob3c mob3c,LOC107576341,LOC107572948,LOC107753835,LOC107723061,LOC107656107,LOC108270829 coding upstream 17194 14513695 ~ 14519419 (+)
btf3l4 bt3l4,btf3l4,LOC103026176,LOC105028135,LOC107655993,LOC107562065 coding upstream 64516 14468907 ~ 14472097 (+)
arrdc2 arrdc2,LOC107753823,LOC107692233,LOC107723859,LOC107656095,LOC107602802 coding downstream 4904 14623851 ~ 14631819 (+)
si:ch211-1a19.3 LOC107656094,LOC107723855,LOC107753891,LOC107692240 coding downstream 38369 14657316 ~ 14661282 (+)
wdr18 wdr18,LOC107593126,LOC106613619 coding downstream 43437 14662384 ~ 14712590 (+)
grin3bb grin3b,LOC107656093,LOC107602803,LOC107723849,LOC107753820 coding downstream 106495 14725442 ~ 14788697 (+)
med16 med16,LOC107723868,LOC107753817,LOC107656090,LOC107674572 coding downstream 181147 14800094 ~ 14808365 (+)
G81753 NA non-coding upstream 39573 14493236 ~ 14497040 (+)
G81736 NA non-coding upstream 43584 14490705 ~ 14493029 (+)
G81752 NA non-coding upstream 51350 14485025 ~ 14485263 (+)
G81750 NA non-coding upstream 84867 14451339 ~ 14451746 (+)
G81749 NA non-coding upstream 86379 14450030 ~ 14450234 (+)
G81782 NA non-coding downstream 15161 14634108 ~ 14637259 (+)
G82017 NA non-coding downstream 487964 15106911 ~ 15108103 (+)
G82024 slc39a3 non-coding downstream 507700 15126647 ~ 15129620 (+)
G82025 NA non-coding downstream 511432 15130379 ~ 15130848 (+)
G82031 NA non-coding downstream 539643 15158590 ~ 15158942 (+)
zfyve9b zfyve9b,LOC107753830,LOC107656105,LOC107562066,LOC107723065,LOC107665831 other upstream 47804 14472566 ~ 14488809 (+)
ptgfr ptgfr,LOC107753832,LOC107562064,LOC107655972,LOC107665835 other upstream 68010 14465892 ~ 14468603 (+)
LOC122353763 NA other upstream 181908 14352300 ~ 14354705 (+)
G81717 NA other upstream 230036 13887333 ~ 14306577 (+)
palm1a palm,palm1a,LOC107656088,LOC107674557,LOC107723854,LOC107753814,LOC107593145 other downstream 205460 14824407 ~ 14855872 (+)
G82072 LOC107753843,LOC107680456,LOC107562070,LOC107718864,LOC107563489 other downstream 662032 15280979 ~ 15282157 (+)
LOC122354546 abcc10,LOC107753844,LOC107680503,LOC107674523,LOC107718869,LOC107680501 other downstream 687705 15306652 ~ 15331632 (+)
hap1 si:dkey-28e7.3,LOC107680538,LOC107674537,LOC107718874,LOC107753848,LOC107564818,LOC107562051 other downstream 770119 15389066 ~ 15400192 (+)
col9a1a col9a1a,LOC107674561,LOC107563512,LOC107753862,LOC107680514,LOC107718896,LOC108438673 other downstream 837935 15456882 ~ 15491776 (+)

Expression


Co-expression Network