LOC122353764 (LOC107723054)


Basic Information

Item Value
gene id LOC122353764
gene name LOC107723054
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 14417383 ~ 14439810 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251644.1
atgaaaccCAAATACAAACCACTCACCGGAACTGAGCTGGTTGAGAAATTAATTGAGGATCTAAAGCAAGTCAGATGGCTGCCACATGATGAAATAAGGACTTATTCAGTCTCAGATTTCCAAACTGTGACGGATGATAGGTACCAAGCCCATCAGGACCTCCAGATGAAATTGGAGAACTTAAAGCTCTACCAGCATTTTCAGCTTGCCCGCCATAGAAACCTACAGAAAGAGCTCAGTCAGGACAGAGCAGCCATACAGTGGTTGGGAAACCTGTCTGCTCTAACTGAACACATGACTGTTCAAAACCTTGTCACCATCTCAAAGGGGGAGATCACTGCTTTCCTAAACAATGGTTTTAAAATTGAGGGACAGAGAGAACGGGATCAGCAGGGTGGTCTTTTTCCAGACAGAGGTTATCCTTGGAGCAGTTGTGCTAAATACATCTTTGCAGACTGTGAAGTAACAGGTCCTGGCAGTGTTTCCTCACAAAAGGAGAGTAATGTGTCAGTCGAAACCCTATTGCCAGTCAAAATGAACTCCCTCAGAGTTCAGGGACAAAGAGTGCAATGCCATTGTCAATTTATGCCCCAGAGACTGCCGGAGTGGAACTTGAAAGTTCATGTCGGAACACGAGAGATTCAGAATGAGCAAGACAAGATTATACAGATTGCCATTGCAGAGGTACACCAATTGTGTGAGAGACACTCTTGGTTGGCAGATGCTCATTTGTTCACCAGTCAGTGGAGTTCAGCCTCTCTAGAGACTTTGTGTGGATCTTTCCCCTTGAAATATGAGGAGCTGATCAAGAAACTTCATTCTTGGATGGACAGAGTAAAGCACAGTGAGAGAATGTCAGGTGATATGCAGAAGAGGCTGGAAGACCTCCATTCTTTACAGGAGACTATGAGAAGAAATTATATGCACATGAATTCAAACAGCATTCTTTCAATGAAGCAGCTGAACAATCAGAGCAGAGCCAATGGAATTCTGAGAGGTCAACTACTGGATCTCACTTTTGTGACTACAGCACAGCATAATTTGGAAGCAAGGAAAGGACTCTGGGAGCTGATGAGTGTGTTGTCCTCACAAATCCAAAAGTGGAAGCTACTAACATTCAAGAAGGAAGAAAAGTTCAACCCAGTGGATAAGATGTTTCGTGATATCGTTCAGATCACTGTTAATGATCCACATCTATTCAGTTTTGTTCGACTGGGTACAACAACAGAGGGCAGTGATATTTTACAAGGACAGAGTCTACGtgctgtctttatgaatggacTTACAGCAATGGTGGAGATTTCTAATCACTTACTTCATGTCTTTGAGTCCCCACAACTCCCTACTTTCTCAAATCAGACTGTCTATATTGATATTCTGTGCACACAATTTCCATATGGCTATGAATACATTAGACCTGATAACTGGACGATGGTAACTACTCCTTCAGCTGAACAAGCTTACATGGGTGCAATTCTTGTCTTATCAAGCTTCAAGTGTGCTTTCATTAGTGGACTCCACATGTCAGGCAAGCAGCATACCGCTGTGCAGTTGGGTTATGCACTGGGACGACAAGTGGTTATTTTGAAGTGTTGTTCAAGCACTGGTTGTTCAGTCATTTCCCAAATGATTTGAGGTGCTCTTCAAACTGGGGCTTGGCTTGTGCTTGATTCAGTTGATTTGTTGGAACAAGGGACATTGTCTGAGTTGGGACAACATTTGACAGAAATTCATCAACATTTATCAGCATTTCAAAGACAAGCACCTGCATTGGACAAGACAGTGAATGAGGTAGAATGTCACATTGCTGGGAAAAATATTCAGGCAAAGCTTAGCTATGGATGCATCACAATCTCAGCTAACGGCTACTCAACTGAGATGCCAGAAATTCTTAGAATTGCAATGAGACCTATATCATTCATGCATCCACACTACAGAATCATTGCCGAAGTGATGTTGATGTCATTTGGATTCTCTGAAGCAGCAACCATTAGTCGCCGTCTAGTCTCGCTATTAGCCTTGCTAAAGGATTCATATTGCCTTCCTGAATTTGTCAGTGGTCATCAAACCTCATGGCTTATACCTCACAACGTGTTGATCTTGCACCAAGCTTTGAAGCTCTCCAATACTGTTGTGCTTGTTGGACCAGCAGGTAGCGGAAAAACAACTTTGTATCGAACCCTTGCAAGTGCAGTTCAGAAACTGTCCAGGACTCAGGTTCTGTATGGAGATCCAGTTGAAAGGCCTGGTTGGTTGGACTCTTTGACTTCTCTTTGCGGTCTTGAACATCCTCATCTCTGCCTTTCATCGGGGGAGAAAATTCAGCCATGAAGACTGAAAATACTAGCTGAACTCACAAACCTTGGTTATTTAACCCCCTCTGTAGTGACACACTGCAATCTGGTATATGTTTCTGGAGAGAACCTGTGGAGATCTGTGTGGAAGAGGGAAATGAATGTGCTGTCGACTGAGCATAATGTAGACCAGAATATTCTGGAAATGTGGAGTCACCTTTCTGAAGACCTGATTCCACTGCTTCCTTTTCTTAATGGGAGTTACAAGCAACTGTTTCAATCAAGAGACGTTAATTATCTAGGCACTTGCAGTGCTCCTAATGCAGTCAACAGCAATCAGATCTCTCCACATCTCTCTCGACTCTTTACCATCTTGGCTCTCCCAAGCATGACTTCGGAAATCCTGTTTTCTATCCATTCCTCAAAATTGCAAGCATGGCTGAAAGAAATACAACCCATACAGAGGGTTGCAGATATAACAAACTGCATCCTAACCTCAACTCTTGAGGTGGATTTTGCTGTGCGTGAATGTGTTACTGATGCCCTACACAGTCCaattttcatcttttctttCAAAGTGTTTCATGGGATGTTCCTCTGGAGGCCAAGGCTTAATATCCAGCAGTCTCTTCATAGGAGTCTGCGATATGGGAGTTTCTCTTCATCTGTTCTTGGTCATCCAGCCCATGACCTCAATATCACCCGCCTGTGGATGCATGAGTGTTTGCGCACTTTTGGAGATCGGCTAACTTCAGAGGAAaggaaaataaagagaaatatgatGACACTTACTATAATCCTACATGCCCATGTGCATCACCAAAACGTACATCAACTTGTACACATTATCCATGCATTTCTCATTCCGGCTTTGTTAGGAACAgcaaaaaagacagacagtaaGTCCATTGTACGCCTAGCAGCTACTCTTTTGGGATACCGACTAATTGAGGTTCATCCAGGAAATGAAGCCAGGTTGTGGGAAATGATGAAAGGCGTTTGTAGCTGAATTGGTGTGGGTGGACATTTGCTTATACTGGTTCACAAAGACACTAGCCAGGCCCTTAAGGATGAGCTGCTGGTAATAATGGCAGACGGAAGCCTCCCTTTACTTTATTCAGATGAGGAACTGAAGAATTTGACGAAAGATGCCAAAgctaatGAAAGTCTACTGCACCAAGCAGCTTTGCAGGCTTTGAGCCAGTCTGATTTGGATGAGATGCGGCCCTACAGGATCCCACCTGATGGAGTTGTCATGGTCATGGATCTTATATGCATGTTGTGTAACCATCCATCTGGTTGGGAGAATAGCAGACAACTTTTGATGCAATCCAGCTTCTTTCagGATCTGGAATTTATTGACTGCTCTACTTTAACCgataaaatgattcaaaagatTTCAGCCAAGAACTGTGCGAGATGCAGAGTCTTTGTGTTGCTGGGTGAGAGCAGTATACCGGGTTTGAAGATGTTGCCttattttgttggttttttccccccacatttTCTGCTAAAACCTCACACTTCACTCATGGAGGAGGTTCAAATGTTTGATCTTTCTCCAAGCGCATCTGAAGTTCAGGACCTTTTTTTGACAGAACTGATGCAGACTGAGTCAGAGCTCACCAAAGCCCTTTACGTCGCTCTGCAGAACATGGCCCGCCTTTCGCCACGTTATCTTTTCACTCTTCATGGTTTCCTGCTCACTTTACGGTCAGCTTTAGCCACACAGAGTCCGGACGTCAGCTTTCACGGAGAGATGTAGCCTACAGCTTTTGTATTTGAGATTACCTACAGGATTGTGTCTCACGTCTCTTCTCAGTATATACCTCGCTTGTTCAAGAGCCATACTGCTTTATTCAGATTATTGGTATCTGTTGCCGTTATTGTGCACAATGAGGGATGCCCTGAGGTAGAACAAGCTACTTTCCACAGAGGATTGAAGAACTTGATGTCTTCAGAGCATTTTTTATCACCGTCCACACATTCTGTCCCCGAGCTGCCAAGTTGGATTCAAATTCACTCTCGAGATGATATTTATCTATTAGAGAAGATTGAACCCTTCCGGGGCCTTGTATCATCTCTGGTGAATTCATCCAAGCTATGGCAGGAATATCTGCACTTTCCTTCATCCACAGTGATTGGACCTGTCCCATGTCAATCTCACTCTCATTTGTCCACAATGCAGCGGGCTATTCTCTGGAAGACGCTGTGTCCTTATTGGCTAGCAGCGGTGGAAGAGGATCTTACATCCTGTGCACAGGGATATTTGCAGAATTCATATCCCGGAGACCCTCTAATGAGCTCCGCAGAACTGATCTCCAACCTTTTGTCCAAAAATCAAGGCCCTGTTGTTACAGGCCACTGGTTAGTCCTGAACAACCGTCATCTGCTGGACTGATGGGATGACAGAATTGTGAACAAGTTAACACAAGTAGTGTACAGCACTGCAAAGGGTGACTTTATCAACGATGCAAGCTACACCTACAAGACTTCATTATCTCATTCTAAACCTCCTCGCATTGCTAGCAGTACAGACCCATCCATTCTGGGCTTTAGTCCAGGTATGGCAAGTGAACTGGTGAAGCTAAAAAGTCATAGACTCTCTTCTGCATCAATCACAGAATACAGTTTTCAGGCAGTTAAATATAACATGACAAGCTCCACTGCTGCGTATCTAACATCATCAGCTCTCTCACGTCTGGAGACTCAAGCAGACCAGCTCAGGTCATACCTGTGGGAGGAGTCATCCAGTATTACACCTCGTGTTTATCGACTAACTGCCTTTCTCAGTCCCAGAGGCTTTCTGGCAGCACTGATCAGACATGCGGCCCACATCCACCACAAGGATATCAGTCTTTATGGATTGAATTTTAAGCTTTCATTGGCCAAGGACAGTCCAGAGGGTCTTCTGCGCCATCTTCAGGGGCATGAAAATGTCGATATCCCAACAATAATAGGCCAGTACTTCATGATACAGGATCAGCCACTTCTCCACCCATACGTggtgtttgtctgtctggacTGGAGCTTCAAGGGTGCTCTGTGGGATCCAGGGTCTAGAGTTATTAATAACAATGAGTCCCTGAAACCTTCTCTTTTTCCACCCCTCTGGGTTTGTGCTGAAGAGAATAGGATCAGTTCCTCTGAAGGCTCACACTGTAATTCCTCATCCCAGCTTCTGTACTACTGCCCCCTGTATGTAGAAAAATACACTGCAGATGGAGGTCAGGATCTGTCCGATGACAATATTATCATCCATGTTCCACTTGCAACAAGGTTAGATCCAATGCCCTGCGCTATGAGGCGTGTTAGGTTAACTAGCACTCTCCTATAATGAACACTTTGAGGAACACATCTGCTCAtagttacaaaatatatatcttgcAGGTTTATCTTTCCTTAGAGAAAACTTGGAAATATTGa

Function

NR:

description
PREDICTED: dynein heavy chain domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251644.1 True 5720 mRNA 0.44 28 14417383 14439810

Neighbor

gene id symbol gene type direction distance location
zgpat zgpat coding upstream 2080 14410061 ~ 14415303 (+)
rtel1 rtel1,LOC107723052,LOC107753877,LOC107665833,LOC107562060 coding upstream 8144 14393900 ~ 14409239 (+)
rbb4l rbb4l,rbbp7,LOC107753839,LOC107562083,LOC107656110,LOC108438657,LOC105893332,LOC103023991,LOC107730765 coding upstream 35850 14373890 ~ 14381533 (+)
ap1s2 ap1s2,LOC105893284,LOC107602789,LOC107665854,LOC107732206,LOC108438658,LOC107656112 coding upstream 50208 14363575 ~ 14367175 (+)
LOC122353760 NA coding upstream 92262 14322514 ~ 14325121 (+)
btf3l4 bt3l4,btf3l4,LOC103026176,LOC105028135,LOC107655993,LOC107562065 coding downstream 29097 14468907 ~ 14472097 (+)
mob3c mob3c,LOC107576341,LOC107572948,LOC107753835,LOC107723061,LOC107656107,LOC108270829 coding downstream 73885 14513695 ~ 14519419 (+)
mknk1 mknk1,LOC107753831,LOC107723060,LOC107655971,LOC107602795 coding downstream 80100 14519910 ~ 14527527 (+)
LOC122354141 NA coding downstream 87858 14527668 ~ 14532247 (+)
atp5f1b atp5b,LOC102199207,LOC100693141 coding downstream 92930 14532740 ~ 14536364 (+)
G81732 NA non-coding upstream 45013 14371306 ~ 14372370 (+)
G81726 comp,LOC107733073,LOC107665851,LOC107680551,LOC107747026 non-coding upstream 107536 14267605 ~ 14309847 (+)
G81724 NA non-coding upstream 283414 14125832 ~ 14133969 (+)
G81711 NA non-coding upstream 555893 13860971 ~ 13861490 (+)
G81708 NA non-coding upstream 631522 13785629 ~ 13785861 (+)
G81749 NA non-coding downstream 10220 14450030 ~ 14450234 (+)
G81750 NA non-coding downstream 11529 14451339 ~ 14451746 (+)
G81752 NA non-coding downstream 45215 14485025 ~ 14485263 (+)
G81736 NA non-coding downstream 50895 14490705 ~ 14493029 (+)
G81753 NA non-coding downstream 53426 14493236 ~ 14497040 (+)
LOC122353763 NA other upstream 62678 14352300 ~ 14354705 (+)
G81717 NA other upstream 110806 13887333 ~ 14306577 (+)
G81722 NA other upstream 387282 14021790 ~ 14030101 (+)
LOC122353915 vmac,LOC107680554,LOC107685109,LOC107757942 other upstream 712408 13701235 ~ 13704975 (+)
LOC122353908 vmac,LOC107680554,LOC107757942,LOC107685109 other upstream 951967 13460464 ~ 13465416 (+)
ptgfr ptgfr,LOC107753832,LOC107562064,LOC107655972,LOC107665835 other downstream 26082 14465892 ~ 14468603 (+)
zfyve9b zfyve9b,LOC107753830,LOC107656105,LOC107562066,LOC107723065,LOC107665831 other downstream 32756 14472566 ~ 14488809 (+)
palm1a palm,palm1a,LOC107656088,LOC107674557,LOC107723854,LOC107753814,LOC107593145 other downstream 384597 14824407 ~ 14855872 (+)
G82072 LOC107753843,LOC107680456,LOC107562070,LOC107718864,LOC107563489 other downstream 841169 15280979 ~ 15282157 (+)
LOC122354546 abcc10,LOC107753844,LOC107680503,LOC107674523,LOC107718869,LOC107680501 other downstream 866842 15306652 ~ 15331632 (+)

Expression


Co-expression Network