LOC122354701


Basic Information

Item Value
gene id LOC122354701
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1865007 ~ 1865147 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252152.1
attctttcgcagaggcaatattgtagcctatgaggctcatccgaggcgcgatcattgctggttgaaaactttacccaatacctcgccgggatgacttgaaatacagtcagccttggcaatttttgccagcctctccggagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252152.1 True 141 snRNA 0.50 1 1865007 1865147

Neighbor

gene id symbol gene type direction distance location
LOC122354691 NA coding downstream 2181 1862687 ~ 1862826 (-)
gdf11 gdf11,LOC107573429,LOC107681455,LOC107683628,LOC107709533,LOC107562248 coding downstream 14716 1828407 ~ 1850291 (-)
timeless timeless,LOC107689440 coding downstream 42259 1802745 ~ 1822748 (-)
pmela pmela,LOC107737361,LOC107716752,LOC107683629,LOC107696046,LOC107570442 coding downstream 67342 1789752 ~ 1797665 (-)
mmp19 mmp19,LOC107696043,LOC107716751,LOC107570443,LOC107737372,LOC107683650 coding downstream 78660 1778309 ~ 1786347 (-)
LOC122354693 NA coding upstream 2123 1867270 ~ 1867409 (-)
LOC122354692 NA coding upstream 4400 1869547 ~ 1869684 (-)
LOC122354709 NA coding upstream 7019 1872166 ~ 1872305 (-)
LOC122354706 NA coding upstream 9502 1874649 ~ 1874789 (-)
LOC122354708 NA coding upstream 12128 1877275 ~ 1877415 (-)
LOC122354127 NA non-coding downstream 123989 1739700 ~ 1741018 (-)
G78574 LOC106524655 non-coding downstream 351104 1512836 ~ 1513903 (-)
G78573 NA non-coding downstream 352775 1512005 ~ 1512232 (-)
G78572 NA non-coding downstream 353481 1510981 ~ 1511526 (-)
G78549 NA non-coding downstream 416002 1444615 ~ 1449005 (-)
G78726 NA non-coding upstream 58558 1923705 ~ 1924282 (-)
LOC122354525 NA non-coding upstream 618523 2483670 ~ 2484928 (-)
G78756 NA non-coding upstream 622337 2487484 ~ 2487836 (-)
G78769 NA non-coding upstream 831262 2696409 ~ 2696697 (-)
G78771 NA non-coding upstream 832081 2697228 ~ 2697472 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other downstream 148878 1704624 ~ 1716129 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other downstream 168220 1588704 ~ 1696787 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other downstream 604917 1217219 ~ 1260090 (-)
LOC122353728 NA other downstream 890220 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 1070871 599107 ~ 794136 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 948205 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 954441 2819588 ~ 2830203 (-)
trnaf-gaa_29 NA other upstream 972136 2837283 ~ 2837354 (-)
trnap-ugg_7 NA other upstream 973094 2838241 ~ 2838312 (-)
trnaf-gaa_30 NA other upstream 973700 2838847 ~ 2838919 (-)

Expression


Co-expression Network