trnaf-gaa_30


Basic Information

Item Value
gene id trnaf-gaa_30
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2838847 ~ 2838919 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1683
ggcgaaatagctcagttgggagagcgttagactgaagatctaaaggtccctggttcgatcccgggtttcggca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1683 True 73 tRNA 0.53 1 2838847 2838919

Neighbor

gene id symbol gene type direction distance location
LOC122354490 gata1a,LOC107727848,LOC107581944,LOC107685680,LOC107655033,LOC107749468 coding downstream 27483 2807984 ~ 2811364 (-)
trnai-aau_28 NA coding downstream 51901 2786874 ~ 2786946 (-)
trnaf-gaa_28 NA coding downstream 52060 2786710 ~ 2786787 (-)
trnaf-gaa_27 NA coding downstream 53627 2785148 ~ 2785220 (-)
trnap-cgg_6 NA coding downstream 54233 2784543 ~ 2784614 (-)
camk1b LOC107714490,LOC107566450,LOC107680448,LOC107572399 coding upstream 157580 2996499 ~ 3037108 (-)
gnl3 gnl3,LOC107714492,LOC107680445,LOC107566445 coding upstream 213777 3052696 ~ 3058430 (-)
LOC122354702 NA coding upstream 216778 3055697 ~ 3055773 (-)
si:dkey-33m11.8 si:dkey-33m11.8,LOC107555995,LOC107699328,LOC107751009,LOC108436238 coding upstream 417960 3256879 ~ 3264114 (-)
pusl1 NA coding upstream 447042 3285961 ~ 3299062 (-)
LOC122354391 NA non-coding downstream 38819 2799533 ~ 2800028 (-)
G78774 NA non-coding downstream 43551 2795022 ~ 2795296 (-)
G78773 NA non-coding downstream 138118 2700513 ~ 2700729 (-)
G78771 NA non-coding downstream 141375 2697228 ~ 2697472 (-)
G78769 NA non-coding downstream 142150 2696409 ~ 2696697 (-)
G78848 rpn1,LOC107714495,LOC107699351,LOC107573146,LOC107680451 non-coding upstream 240095 3079014 ~ 3079668 (-)
G78854 NA non-coding upstream 275378 3114297 ~ 3114570 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding upstream 384816 3223735 ~ 3241319 (-)
G78903 NA non-coding upstream 392208 3231127 ~ 3232742 (-)
G78918 LOC107751023,LOC107680412,LOC107555990,LOC107699319,LOC107714481 non-coding upstream 427265 3266184 ~ 3266672 (-)
trnap-ugg_7 NA other downstream 535 2838241 ~ 2838312 (-)
trnaf-gaa_29 NA other downstream 1493 2837283 ~ 2837354 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other downstream 8644 2819588 ~ 2830203 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other downstream 22719 2813352 ~ 2816128 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other downstream 1122718 1704624 ~ 1716129 (-)
trnap-cgg_7 NA other upstream 892 2839811 ~ 2839881 (-)
trnaf-gaa_31 NA other upstream 1497 2840416 ~ 2840486 (-)
trnaf-gaa_32 NA other upstream 3056 2841975 ~ 2842046 (-)
trnaf-gaa_33 NA other upstream 4617 2843536 ~ 2843607 (-)
trnaf-gaa_34 NA other upstream 6181 2845100 ~ 2845170 (-)

Expression


Co-expression Network