trnap-agg_14


Basic Information

Item Value
gene id trnap-agg_14
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 1860833 ~ 1860904 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1593
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1593 True 72 tRNA 0.61 1 1860833 1860904

Neighbor

gene id symbol gene type direction distance location
trnaq-uug_15 NA coding upstream 465 1860297 ~ 1860368 (+)
cdk2 cdk2,LOC107683630,LOC107570445,LOC107562245 coding upstream 87001 1766697 ~ 1773832 (+)
prph prph,LOC107683634,LOC107730884,LOC107696041,LOC107737370 coding upstream 98959 1752303 ~ 1761874 (+)
LOC122354125 Tuba1a,tuba1a,LOC108255233,LOC107683637,LOC108247626,LOC106934846,LOC102789989 coding upstream 108665 1749754 ~ 1752168 (+)
suox suox,LOC107683635,LOC107737358,LOC107562243,LOC107696022 coding upstream 115009 1739043 ~ 1745824 (+)
trnas-gcu_16 NA coding downstream 142 1861046 ~ 1861127 (+)
trnaq-uug_16 NA coding downstream 544 1861448 ~ 1861519 (+)
trnaq-cug_12 NA coding downstream 707 1861611 ~ 1861682 (+)
trnas-gcu_17 NA coding downstream 1342 1862246 ~ 1862327 (+)
LOC122354694 NA coding downstream 2219 1863123 ~ 1863229 (+)
G78625 NA non-coding upstream 58520 1801351 ~ 1802313 (+)
G78540 NA non-coding upstream 94244 1766371 ~ 1766589 (+)
G78517 NA non-coding upstream 191138 1669022 ~ 1669695 (+)
G78490 NA non-coding upstream 285708 1572594 ~ 1575125 (+)
G78484 NA non-coding upstream 298177 1558860 ~ 1562656 (+)
G78652 LOC107550538,LOC107697642 non-coding downstream 37829 1898733 ~ 1899063 (+)
G78674 NA non-coding downstream 75956 1936860 ~ 1939086 (+)
G78757 NA non-coding downstream 627310 2488214 ~ 2488553 (+)
G78772 NA non-coding downstream 839491 2700395 ~ 2700703 (+)
G78784 NA non-coding downstream 951473 2812377 ~ 2813282 (+)
G78506 inpp1,LOC107737355,LOC107683640,LOC107730897 other upstream 134736 1644631 ~ 1726097 (+)
nabp2 si:ch73-190f16.2,nabp2,LOC107572067,LOC107557546,LOC107683643,LOC107675336,LOC107737367,LOC106565411 other upstream 179633 1678226 ~ 1681200 (+)
G78500 NA other upstream 267708 1590744 ~ 1593125 (+)
rargb LOC107730622,LOC107681487,LOC107551317,LOC107681495,LOC107754558,LOC107557540,LOC108424631,LOC105907526 other upstream 342870 1485707 ~ 1517963 (+)
rbms2a rbms2,LOC107730618,LOC108424578,LOC107654803,LOC107565002,LOC107709509,LOC102312407,LOC107681488,LOC107551328 other upstream 411873 1419520 ~ 1448960 (+)
G78763 NA other downstream 817231 2678135 ~ 2680142 (+)
G78790 NA other downstream 964635 2825539 ~ 2826794 (+)
camk2n1 si:dkey-33m11.6,LOC107572850,LOC107680422,LOC107555994,LOC107751034,LOC107714486,LOC107699327 other downstream 1409295 3270199 ~ 3272619 (+)
LOC122353713 LOC107714487,LOC107555999 other downstream 1497306 3358210 ~ 3361658 (+)
tmem167b tmem167b,LOC107592590,LOC107555997,LOC107699326 other downstream 1525354 3386258 ~ 3391229 (+)

Expression


Co-expression Network