trnaf-gaa_8


Basic Information

Item Value
gene id trnaf-gaa_8
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2712828 ~ 2712898 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1636
gccgaaatagctcagttgggagagcgttagactgaagatctaaaggtcctggttcgatcccggtttcggca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1636 True 71 tRNA 0.52 1 2712828 2712898

Neighbor

gene id symbol gene type direction distance location
trnaf-gaa_7 NA coding downstream 1498 2711253 ~ 2711330 (-)
trnap-cgg_4 NA coding downstream 2098 2710659 ~ 2710730 (-)
trnai-aau_7 NA coding downstream 2901 2709854 ~ 2709927 (-)
trnai-aau_6 NA coding downstream 4462 2708285 ~ 2708366 (-)
trnaf-gaa_6 NA coding downstream 4640 2708116 ~ 2708188 (-)
trnai-aau_8 NA coding upstream 87 2712985 ~ 2713060 (-)
trnap-cgg_5 NA coding upstream 893 2713791 ~ 2713862 (-)
trnai-aau_9 NA coding upstream 1648 2714546 ~ 2714620 (-)
trnaf-gaa_9 NA coding upstream 3064 2715962 ~ 2716034 (-)
trnai-aau_10 NA coding upstream 3223 2716121 ~ 2716195 (-)
G78773 NA non-coding downstream 12099 2700513 ~ 2700729 (-)
G78771 NA non-coding downstream 15356 2697228 ~ 2697472 (-)
G78769 NA non-coding downstream 16131 2696409 ~ 2696697 (-)
G78756 NA non-coding downstream 224992 2487484 ~ 2487836 (-)
LOC122354525 NA non-coding downstream 227900 2483670 ~ 2484928 (-)
G78774 NA non-coding upstream 82124 2795022 ~ 2795296 (-)
LOC122354391 NA non-coding upstream 86635 2799533 ~ 2800028 (-)
G78848 rpn1,LOC107714495,LOC107699351,LOC107573146,LOC107680451 non-coding upstream 366116 3079014 ~ 3079668 (-)
G78854 NA non-coding upstream 401399 3114297 ~ 3114570 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding upstream 510837 3223735 ~ 3241319 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other downstream 996699 1704624 ~ 1716129 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other downstream 1016041 1588704 ~ 1696787 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other downstream 1452738 1217219 ~ 1260090 (-)
LOC122353728 NA other downstream 1738041 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 1918692 599107 ~ 794136 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 100454 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 106690 2819588 ~ 2830203 (-)
trnaf-gaa_29 NA other upstream 124385 2837283 ~ 2837354 (-)
trnap-ugg_7 NA other upstream 125343 2838241 ~ 2838312 (-)
trnaf-gaa_30 NA other upstream 125949 2838847 ~ 2838919 (-)

Expression


Co-expression Network