trnas-gga


Basic Information

Item Value
gene id trnas-gga
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2726367 ~ 2726437 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1643
ggctcgttggtctaggggtatgattctcgcttggAAAgtgagaggtcccggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1643 True 71 tRNA 0.58 1 2726367 2726437

Neighbor

gene id symbol gene type direction distance location
trnai-aau_11 NA coding downstream 7028 2719267 ~ 2719339 (-)
trnai-aau_10 NA coding downstream 10172 2716121 ~ 2716195 (-)
trnaf-gaa_9 NA coding downstream 10333 2715962 ~ 2716034 (-)
trnai-aau_9 NA coding downstream 11747 2714546 ~ 2714620 (-)
trnap-cgg_5 NA coding downstream 12505 2713791 ~ 2713862 (-)
trnaf-gaa_10 NA coding upstream 527 2726964 ~ 2727042 (-)
trnaf-gaa_11 NA coding upstream 3685 2730122 ~ 2730194 (-)
trnaf-gaa_12 NA coding upstream 8374 2734811 ~ 2734883 (-)
trnai-aau_12 NA coding upstream 11673 2738110 ~ 2738187 (-)
trnai-aau_13 NA coding upstream 30787 2757224 ~ 2757296 (-)
G78773 NA non-coding downstream 25638 2700513 ~ 2700729 (-)
G78771 NA non-coding downstream 28895 2697228 ~ 2697472 (-)
G78769 NA non-coding downstream 29670 2696409 ~ 2696697 (-)
G78756 NA non-coding downstream 238531 2487484 ~ 2487836 (-)
LOC122354525 NA non-coding downstream 241439 2483670 ~ 2484928 (-)
G78774 NA non-coding upstream 68585 2795022 ~ 2795296 (-)
LOC122354391 NA non-coding upstream 73096 2799533 ~ 2800028 (-)
G78848 rpn1,LOC107714495,LOC107699351,LOC107573146,LOC107680451 non-coding upstream 352577 3079014 ~ 3079668 (-)
G78854 NA non-coding upstream 387860 3114297 ~ 3114570 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding upstream 497298 3223735 ~ 3241319 (-)
nab2 nab2,LOC107557549,LOC107730902,LOC107696037,LOC107683651,LOC107737369 other downstream 1010238 1704624 ~ 1716129 (-)
LOC122354408 LOC107683642,LOC107737350,LOC107572058 other downstream 1029580 1588704 ~ 1696787 (-)
phactr3b phactr3b,LOC107730624,LOC107670936,LOC107722000,LOC107654794,LOC107550338,LOC103365918,LOC106955159,LOC104947949 other downstream 1466277 1217219 ~ 1260090 (-)
LOC122353728 NA other downstream 1751580 972954 ~ 974787 (-)
G78195 atp2b2,slc6a1b,slc6a1,LOC107561799,LOC107570616,LOC107670967,LOC107746710,LOC107570615,LOC107697564 other downstream 1932231 599107 ~ 794136 (-)
LOC122354491 gata2a,gata2,LOC107680419,LOC107744843,LOC107573143 other upstream 86915 2813352 ~ 2816128 (-)
LOC122354336 srpk2,srpk1b,LOC108428417,LOC107714507,LOC107699336 other upstream 93151 2819588 ~ 2830203 (-)
trnaf-gaa_29 NA other upstream 110846 2837283 ~ 2837354 (-)
trnap-ugg_7 NA other upstream 111804 2838241 ~ 2838312 (-)
trnaf-gaa_30 NA other upstream 112410 2838847 ~ 2838919 (-)

Expression


Co-expression Network