trnaf-gaa_38


Basic Information

Item Value
gene id trnaf-gaa_38
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 2868471 ~ 2868542 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1697
ggcgaaatagctcagttgggagagcgttagactgaagatctaaaggtccctggttcgatccgGGTTTcggca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1697 True 72 tRNA 0.53 1 2868471 2868542

Neighbor

gene id symbol gene type direction distance location
LOC122354490 gata1a,LOC107727848,LOC107581944,LOC107685680,LOC107655033,LOC107749468 coding downstream 57107 2807984 ~ 2811364 (-)
trnai-aau_28 NA coding downstream 81525 2786874 ~ 2786946 (-)
trnaf-gaa_28 NA coding downstream 81684 2786710 ~ 2786787 (-)
trnaf-gaa_27 NA coding downstream 83251 2785148 ~ 2785220 (-)
trnap-cgg_6 NA coding downstream 83857 2784543 ~ 2784614 (-)
camk1b LOC107714490,LOC107566450,LOC107680448,LOC107572399 coding upstream 127957 2996499 ~ 3037108 (-)
gnl3 gnl3,LOC107714492,LOC107680445,LOC107566445 coding upstream 184154 3052696 ~ 3058430 (-)
LOC122354702 NA coding upstream 187155 3055697 ~ 3055773 (-)
si:dkey-33m11.8 si:dkey-33m11.8,LOC107555995,LOC107699328,LOC107751009,LOC108436238 coding upstream 388337 3256879 ~ 3264114 (-)
pusl1 NA coding upstream 417419 3285961 ~ 3299062 (-)
LOC122354391 NA non-coding downstream 68443 2799533 ~ 2800028 (-)
G78774 NA non-coding downstream 73175 2795022 ~ 2795296 (-)
G78773 NA non-coding downstream 167742 2700513 ~ 2700729 (-)
G78771 NA non-coding downstream 170999 2697228 ~ 2697472 (-)
G78769 NA non-coding downstream 171774 2696409 ~ 2696697 (-)
G78848 rpn1,LOC107714495,LOC107699351,LOC107573146,LOC107680451 non-coding upstream 210472 3079014 ~ 3079668 (-)
G78854 NA non-coding upstream 245755 3114297 ~ 3114570 (-)
G78899 LOC107556004,LOC107699348,LOC107714497 non-coding upstream 355193 3223735 ~ 3241319 (-)
G78903 NA non-coding upstream 362585 3231127 ~ 3232742 (-)
G78918 LOC107751023,LOC107680412,LOC107555990,LOC107699319,LOC107714481 non-coding upstream 397642 3266184 ~ 3266672 (-)
trnap-cgg_12 NA other downstream 2085 2866316 ~ 2866386 (-)
trnaf-gaa_37 NA other downstream 6152 2862249 ~ 2862319 (-)
trnaf-gaa_36 NA other downstream 10830 2857568 ~ 2857641 (-)
trnap-cgg_11 NA other downstream 11434 2856965 ~ 2857037 (-)
trnaf-gaa_35 NA other downstream 13954 2854446 ~ 2854517 (-)
trnai-aau_29 NA other upstream 86 2868628 ~ 2868700 (-)
trnaf-gaa_39 NA other upstream 1497 2870039 ~ 2870111 (-)
trnai-aau_30 NA other upstream 1655 2870197 ~ 2870270 (-)
trnap-cgg_13 NA other upstream 2467 2871009 ~ 2871078 (-)
trnai-aau_31 NA other upstream 3222 2871764 ~ 2871838 (-)

Expression


Co-expression Network