XLOC_006656 (ogfrl1)


Basic Information

Item Value
gene id XLOC_006656
gene name ogfrl1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 27900446 ~ 27916565 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012854
AGAGCGCTGGAAATCCCCCATTAGTCACGTAAAAGCGACCCGGACGGCGGCTCTACATCATATTAAAGCTCGATCCTGAGCCGAGTGAGGACTTTAAACTATGTAGGCACGGAGGACAGGGTTTAAATGGGCAATCTGATGGGCAGCTGGAGATACAAGGAGCCGAGCACAGTGGAAGAATGCGACTCGACGTGGGAAACGGACTCGGAGAGCGACGAGCATCAGCCGGGAGGAGAGGAGGAGGACAGCGGCATCTCCGAGTCAATGAGCCCGGCGGAGGCAGCCAGAGGAGGCGAACAGCTGGAGCACGGATCACCACAGTTTGGTGACATGATGGAGTCCTCCACCAGGATGAAAAGGAGCTTTTATGCTGCAAAGGACTTGTACAAATATCGCCACAGTTATCCGAACTACAAGGAGCCTCGTCAGCCGAATGAATATCGTAATCTGAGGTTTTATCTAAATAAGATACCGCTGGTGCCGgatgGTATTTACATTGAAGAAATCCTCACTAAATGGAGGGGAGACTATGACAAACTAGAGCACAATCACACATACATTCAGTGGCTTTTTCCACTTCGAGAACAAGGCCTAAATTTTTATGCTCAAGAACTCACTCAGGATGAGATAAAGGAATTCCAAAGCACTCGGGAAGCCAAGAGACGATTCCTCCTGGCATATACAATCATGCTGGATTTCTTTGGAATCAAACTCCTGGATAAAAACGGAAATGTATCTCGAGCTTCAAATTGGCAAGATCGCTTCCAGCACCTAAATGAGTCGCAGCACAACTACCTGCGTATCACTCGCATTCTGAAGAGTCTTGGTGAGCTGGGCTTTGAAAGCTTCAAGCTGCCTCTGGTGCGTCTGCTATTGGAGGAGGCATTGGTGGAGGGCACTTTACCCAACATGCGTCACAGTGCACTGGAATACTTCGTCTTCACACTGCGCCAACATGCTCAGAGACGTGCCCTGCTCCGCTTTGCCCGGCGTCATTACCAGCCACCAGAAAACTTCATCTGGGGGCCACCCAAAAAGAAACGCATTCCAGCCTCTATCTCCACAGGGACAAGAATGGTGAAAAACGAGGTGGTGGAGAGAAGTGTGGCCAAAGCCAGGTCACCCAGAGAGGGCAGGAATAACGCGGAGAGAGAAATGGAGGACATGGAGGAGAGGAAAAGTGGAGAGTGGAAATTGGCTAAGGGGGCTAAAATGCTACAGGAGGGCAGAGGAAGGGTGGTTATAGAGGAATATATTGAGACCATTCCTCTGTAAGAACTGAAGGAGAGAAATTCTGGAAATGCTAAAAGAATGGCACAGCAATATTATTCCATACTATTGCCTTTTAGAGACTTGCTTTGTGAAGAACTCGACTGTttgccattttgtttttaatataaagtgCTTTTCTTAACTCTAAATATGTTTCACAAAGTGTTAGCGGATGAATTTCTCTACTGCGGTTCTTGCTTGCAGGCCTCGAGAGAGTTCTTAGCACATGTACAAGTGTGAGTATCTGTAAGTGCTACCTGAACACTTTGTGTGAAATATTGCACTTTTTGACTCTTCAGTCTTCCCCTGTGAAAGAATATTATTATCTTAGATGGCAAGCTTTGAGATGAGgctttatttgttaattataaGCCGGCTTCTCAGACCgatgcattttctttttcaggTTCAGAAGAACTTGACAAAGTTTCTTAGAACCGATACTTGTAGCTAATTGTAACAGATCATGATAACATGTAGTAAGTGTGAATATACTTTCAGGAATTTTCAGGTAATTGATCTTCCATGTTTCTATAGGTATGCGTGAGAGTTTAATTCGGTTTTCTCAAATACGTCTTGCAATATAAAAGTGCCTCTTTTTGTTAGCTAATGTTGCGTGCTCTTTCATTTTGAGTCGCAGTAAGAACAAAATTCAATTTCAGCTGTTTTTTTGGAGAAAAGAAAAGCTATGAACAACAAATGCAGTTTAGATATCATTATATATAGTGTGAGTGTTGCGATCACAACACAGCAAGATTATTAACTAAAGAACTATTAGCTGAAAGACACATGAAAAGAAATTATAGcttaaaatgtgtaatatttaaatacaaagcAACACATTTTCACATGTGAAAGTTTAGACAAATTCTTCTGGTATTTAAATCTTAGTGTTTTTTTACAAGCAGATGCTTGTACCTCAGGAAGGCCATTTAATGTACATAATGTAGCTCATTAGTAAGATGCAAGTAAACAGAGTAAGGTATTTCTAAAACAGTATAAACATACATTATATTTTAACCAGTCATTTGTCTAAATACTGAGAATAAATCTCCCAATATTCTCAATATTTTTTATGACACACATCAGTAAATATAaacaagtattgaacatgtcatgtttttttctagAAATAATATTTCCAAATGGGCTGCTGTCATGGAATTGAAAAtcttggtaaaaacccaaacaagataaaaataaagcaaacaaaaaacatttgttatgtGTAATAATGAAACGACACAAGGAcaaaagtactgaactactgaaacgtatttaatactttatataaaagttttttttttgtgattggcagcttaa
>TCONS_00012855
ATGGGCAATCTGATGGGCAGCTGGAGATACAAGGAGCCGAGCACAGTGGAAGAATGCGACTCGACGTGGGAAACGGACTCGGAGAGCGACGAGCATCAGCCGGGAGGAGAGGAGGAGGACAGCGGCATCTCCGAGTCAATGAGCCCGGCGGAGGCAGCCAGAGGAGGCGAACAGCTGGAGCACGGATCACCACAGAACTACAAGGAGCCTCGTCAGCCGAATGAATATCGTAATCTGAGGTTTTATCTAAATAAGATACCGCTGGTGCCGgatgGTATTTACATTGAAGAAATCCTCACTAAATGGAGGGGAGACTATGACAAACTAGAGCACAATCACACATACATTCAGTGGCTTTTTCCACTTCGAGAACAAGGCCTAAATTTTTATGCTCAAGAACTCACTCAGGATGAGATAAAGGAATTCCAAAGCACTCGGGAAGCCAAGAGACGATTCCTCCTGGCATATACAATCATGCTGGATTTCTTTGGAATCAAACTCCTGGATAAAAACGGAAATGTATCTCGAGCTTCAAATTGGCAAGATCGCTTCCAGCACCTAAATGAGTCGCAGCACAACTACCTGCGTATCACTCGCATTCTGAAGAGTCTTGGTGAGCTGGGCTTTGAAAGCTTCAAGCTGCCTCTGGTGCGTCTGCTATTGGAGGAGGCATTGGTGGAGGGCACTTTACCCAACATGCGTCACAGTGCACTGGAATACTTCGTCTTCACACTGCGCCAACATGCTCAGAGACGTGCCCTGCTCCGCTTTGCCCGGCGTCATTACCAGCCACCAGAAAACTTCATCTGGGGGCCACCCAAAAAGAAACGCATTCCAGCCTCTATCTCCACAGGGACAAGAATGGTGAAAAACGAGGTGGTGGAGAGAAGTGTGGCCAAAGCCAGGTCACCCAGAGAGGGCAGGAATAACGCGGAGAGAGAAATGGAGGACATGGAGGAGAGGAAAAGTGGAGAGTGGAAATTGGCTAAGGGGGCTAAAATGCTACAGGAGGGCAGAGGAAGGGTGGTTATAGAGGAATATATTGAGACCATTCCTCTGTAA

Function

symbol description
ogfrl1 Predicted to enable G protein-coupled opioid receptor activity. Predicted to be located in membrane. Orthologous to human OGFRL1 (opioid growth factor receptor like 1).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0038023 signaling receptor activity molecular_function
GO:0004985 opioid receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061207-32 Predicted to enable G protein-coupled opioid receptor activity. Predicted to be located in membrane. Orthologous to human OGFRL1 (opioid growth factor receptor like 1).

Ensembl:

ensembl_id ENSDARG00000061223

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012854 False 2595 mRNA 0.41 7 27900446 27916565
TCONS_00012855 True 1062 mRNA 0.50 6 27901766 27916439

Neighbor

gene id symbol gene type direction distance location
XLOC_006655 NA coding downstream 83805 27801415 ~ 27816641 (-)
XLOC_006653 rims1a coding downstream 133003 27631926 ~ 27767443 (-)
XLOC_006654 CR356236.2 coding downstream 210170 27690160 ~ 27690276 (-)
XLOC_006652 kcnq5a coding downstream 279200 27378857 ~ 27621246 (-)
XLOC_006651 ddx43 coding downstream 546413 27332656 ~ 27354033 (-)
XLOC_006657 smap1 coding upstream 93162 28009727 ~ 28263868 (-)
XLOC_006658 CR392046.1 coding upstream 262869 28179434 ~ 28179550 (-)
XLOC_006659 sdhaf4 coding upstream 348269 28264834 ~ 28265919 (-)
XLOC_006660 tlx1 coding upstream 351432 28267997 ~ 28272299 (-)
XLOC_006661 BX950184.1 coding upstream 360333 28276898 ~ 28417158 (-)
XLOC_006471 BX537274.2 misc downstream 17635541 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 27074221 825904 ~ 826225 (-)
XLOC_006650 NA non-coding downstream 622737 27271338 ~ 27277709 (-)
XLOC_006649 NA non-coding downstream 672696 27227361 ~ 27227750 (-)
XLOC_006646 AL627132.1 non-coding downstream 1333262 26567066 ~ 26567184 (-)
XLOC_006663 NA non-coding upstream 510912 28427477 ~ 28444818 (-)
XLOC_006664 NA non-coding upstream 581237 28497802 ~ 28513347 (-)
XLOC_006665 NA non-coding upstream 629847 28546412 ~ 28572464 (-)

Expression


Co-expression Network