zgc:153169 (zgc:153169,LOC107725444,LOC107666437,LOC107601788,LOC107552913)


Basic Information

Item Value
gene id zgc:153169
gene name zgc:153169,LOC107725444,LOC107666437,LOC107601788,LOC107552913
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 8947750 ~ 8950582 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254704.1
TGACAGTCTTCGGTCTTACACTTTAACCTTTGGAAAAGAAGGAGATTAAAGCTTCCCATACATAAATACGTGTTTCTAATGCACTAATGTCAAATGGCAGCTGTGGGGACATGGTCTTTCTCTCGTCCTGCAGTGGAGAGAATGAGGTGTATGCTGCTAGCTGGACAAAATGCTACAGATGTTGTAGAAACAGCAATGGCAGAGGTGGAAGATGATATAGACACGGGACAGCACATTGTTGGCAGAGGAGGATATCCAAATTTCAAGGGAGTGGTTGAATGTGATGCTGCAATAATGGAAGGTGTGCCAGGACGATTTGGGGCAGTGGCTGCACTTCAAGGAATTGCACAGCCGTGTCGTGTAGCTCGCAAAGTAATGGAGAAGAGTCCTCACAGCTTGCTTGTTGGAGATGGAGCAGAAGCATTTGCTCGGGAATCGGGTTTTACATCTGAACCCAATGCCAATATGCTTTCCGACCATTCAGCTGCTGCTTACCGGGAATACCTTGAAAAACATAAACCTATTAGAGGTGGACATGATACAATAGGTCTTATAGCTCTTGATCGAAGTGGTAACATAACAGTAGGAGTTTCCACATCAGGAGCTCCCTTCAAATCACCAGGGCGGGTGGGAGATTCTCCACTTCCAGGCTGTGGTCTATACGCAGACCATACAGTGGGTGCAGCAGCagCTACAGGTGATGGAGACAAAATCATGTGCTACTGCCCAAGCTTTCATGTTGTGCAGCTGATGAAACAAGGCTCATCTCCTAATGAAGCATGTCACACTGTGCTTGCCGATATACAGAGGAGAATAGGTGGTGATAAATGCTTTGAAATTGGGCTTATTTCACTGAATATTAAGGGAGAGGTCGGAGCTGCATCTTCAGTTGAATTTCCCTACACATTCTGGAGCCAAGGGTTGAGTTCAGTGGAGGAGCTAGTCATTAACAGAAAtccataaatgtttaatttccaCTCATTAAGTATGTGGTCGGTCATAAAACGTcattactttttaacatttgtgttGACCTTTCAGTTCTTTGTATGAAAAACACTCTGTTCATTTTTTCTCACaatcaataaaaattaatctGGTGGC

Function

symbol description
zgc:153169 Predicted to enable N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity. Predicted to be involved in protein deglycosylation. Predicted to be active in cytoplasm.

NR:

description
uncharacterized protein LOC110502391 isoform X2

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254704.1 True 1104 mRNA 0.44 10 8947750 8950582

Neighbor

gene id symbol gene type direction distance location
pdcd2 pdcd2,LOC107725489,LOC107666434,LOC107601856,LOC107676576,LOC107743527,LOC107552926 coding upstream 4851 8940728 ~ 8942899 (+)
ccsapb LOC107725482,LOC107601854,LOC107666447,LOC107676587,LOC107552946,LOC107743530 coding upstream 37957 8905886 ~ 8909793 (+)
acta1b act2,actc1a,LOC105907633,LOC107678759,LOC108430668 coding upstream 42739 8901550 ~ 8905011 (+)
abcb10 abcb10,LOC107666478,LOC107725469,LOC107601852,LOC107676605,LOC107743532,LOC107552914 coding upstream 47468 8892993 ~ 8900282 (+)
pgbd5 pgbd5,LOC107725485,LOC107552948,LOC107743535 coding upstream 140223 8791156 ~ 8807527 (+)
rab1ab rab1a,LOC107676578,LOC107666439,LOC103035225,LOC107725478,LOC107601860,LOC105005759 coding downstream 313 8950895 ~ 8956697 (+)
sertad2b sertad2,sertad2b,LOC107666512,LOC107676574,LOC107743523,LOC107725465 coding downstream 24507 8975089 ~ 9008344 (+)
lgalslb lgalsl,LOC107601863,LOC107676594,LOC107666541,LOC107552938 coding downstream 63410 9013992 ~ 9020883 (+)
echs1 echs1,LOC107601864,LOC107666378,LOC107676592,LOC107743519,LOC107725439 coding downstream 70713 9021295 ~ 9023686 (+)
msx3 msx3,LOC107743518,LOC107552925,LOC107601809,LOC107725487,LOC107666509 coding downstream 115498 9066080 ~ 9068744 (+)
G92066 NA non-coding upstream 50841 8836716 ~ 8896909 (+)
G92048 NA non-coding upstream 156698 8789731 ~ 8791052 (+)
G92047 NA non-coding upstream 158549 8788997 ~ 8789201 (+)
G92046 NA non-coding upstream 159901 8786988 ~ 8787849 (+)
G92045 NA non-coding upstream 160886 8786595 ~ 8786864 (+)
G92108 erlin1,LOC107743516,LOC107725471,LOC107666491,LOC107601865,LOC107676597 non-coding downstream 99785 9050367 ~ 9097905 (+)
G92111 NA non-coding downstream 189635 9140217 ~ 9144511 (+)
G92147 NA non-coding downstream 313482 9264064 ~ 9275699 (+)
G92313 NA non-coding downstream 499864 9450446 ~ 9450689 (+)
G92334 mcmbp,LOC107726945,LOC107601886,LOC107559330 non-coding downstream 528839 9479421 ~ 9479752 (+)
sf3b5 sf3b5,LOC107601807 other upstream 207655 8739036 ~ 8740095 (+)
pcnx2 pcnxl2,LOC107725461,LOC107601842,LOC107743596,LOC107666362,LOC107676602,LOC107552953 other upstream 264698 8666267 ~ 8683052 (+)
G91833 slc37a1 other upstream 636926 8306486 ~ 8310824 (+)
zswim8 LOC107666425,LOC107565928,LOC107713895,LOC107743573 other upstream 1061060 7858698 ~ 7886690 (+)
chchd1 LOC107713887,LOC107565922,LOC107743624,LOC107696882,LOC107666381,LOC107555316 other upstream 1108805 7836180 ~ 7838945 (+)
fuom fuom,LOC107676595,LOC107666397,LOC107601808 other downstream 75361 9025943 ~ 9027909 (+)
spef1 zgc:66426,LOC107601866,LOC107725472,LOC107666492,LOC107743614 other downstream 130266 9080848 ~ 9089121 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other downstream 210935 9161517 ~ 9164114 (+)
atoh7 atoh7,LOC107726941,LOC107601814,LOC107666420,LOC107743508,LOC107655428,LOC108426756 other downstream 479596 9430178 ~ 9434605 (+)
LOC122356813 adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663 other downstream 1254531 10205113 ~ 10249725 (+)

Expression


Co-expression Network