st3gal7 (st3gal7,LOC107665608,LOC107601047,LOC107747259)


Basic Information

Item Value
gene id st3gal7
gene name st3gal7,LOC107665608,LOC107601047,LOC107747259
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 15872075 ~ 15876837 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255687.1
ATAAAGAATATAAAGGGACCTTTGAAACATGGCTTTTAGGAATGATATCAAGCATAATCATAAACTGAATTGTGTGGTTGTTTGAACAGTACTAGATAAAGTACTGTGGTATACAAAGAGAAGTCTCTGAGACGGATAAATGATTAACTGTGAGGTGGGATCAGAGTGAGACAAAACACGGCAGTGAATGAAAGGGACAAAAGAGCAGCTCATTTTCAATACAACACAGACATGTTTCTATCTCCACACCTGGGAGTAGACGACAGCATCTGAAATTAGAGGTGTAGTTAAGAATTGGTTTGGACAAAATGGTGACGCTGAAACATTTGAGCGTTAATGATAACGACGAAGACAGCGTTCCTCTGTTACCGGAAGCCAGCAGCTTGGAGAGCGCAACCACCCAACACAGCAGGGCAGAGTCCAGGGAATTCTTCCTTAGCCGGAGGAACAACTTCATTTTAAGCattgctctgttgctgagctgTTACTCGGCCATTCTGGTTCCTGCGTATCTGCCAAGACCAGAGCCCATCTGGACTAATGACAGCTCTGCTGAAACTCTGGCTCTGCTGAATCAGTCAGCGGCTCTGCTGAATCAGTCCTGTCGCAGCGGCTGGAGCGTGGAGAGGGTGAGAGCGTTGTCTATACCTGCTGGGCTGCTGAAGATTCCCGTGTTCCTGGAGAACGGCACAGGAGACTGGGCGCTGCCTCCTCCTCTGGGTCTGCAGGGTAGTGAGGAGATGGTGGCTCAGGCCCTGAAAGCCCTGCCTTATACTGCTGTACCCACTGGCCCAGAGACCTGCAGGAGATGCGTGGTGGTTGGAAGCGGTGGCATTTTACACGGCAAAAATCTTGGTCCTCACATAGACCAGTACAACATCATCATCAGAATGAACAATGCTCCAGTATTTGGATATGAAAAAGACGCTGGATCCAGAACTACCATTCGCCTCATTTATCCAGAAGCGGCTCCTTCTCAGACACAAGAATACGAGAGTACTGAACTGGTGGCTTTGGTGGCATTCAAGAGTTTAGATTTAGCGTGGCTCAAATCTGTGGTAACCAAAGAACCTTTGAGCTGGTGGTCTAAATTGTGGTTCTGGAAGGACGTAATAGACTCGATCCCTCTTCAACCAGAAAATGTTCGCATCCTGAATCCTGAAATCATGTACAGGACGGGGCAGGTGCTGCAGACCTACGCAGAGCAACAGAAAAAGatGGTGCCGACGCTGGGTATGACGGCGGTAGTTCTGGCCCTGCAGGTGTGTGACGAGGTGAGTTTAGCTGGATTTGGATACGACCTGCAGCACCCTGGAGCTCTGCTGCATTATTACGGCTCTCTCCGCATGGATGCCATGAACACACAGGTGGTTCACGACGTCAGCGCCGAGACCATCTTGCTGCGGGAGCTGGTCAAATCTGGAGCGGTGAGAGACCTCACTGGTGCACTGTGATGACTGCGGAAACTATCCATGCTTCCAATAGTTAAGAGAGATGGCAAACAGCAGAAAACTGTCCAGACACCCGGACTTGAGCAGGCCACCTTCAACGTCACAAAACAATAGGGTCAATCTCAACATTGCTATTCATAattttacaatgtttaaaaatgttaatatttaggGAAAATACAACATAAGACAATAcccaataacaaaataatatacaaaggCATTTAAGTGGACTCGACTAAaccaaactaaaactaaactaaaccaaaagCTACTATAGTAGACTTATAATAGACCCAAATACAGCTTTTTAAAGgatgacagaatattttatccaaaaaaattacttatttattttcttgcaaaaaaaaactgattacatagtgtttaaaaacattttttaaagcaaaacattgcgtttaaatacaaacaatactatagcaaaatataaatgacGTATTAATGTTAGTATCAGTTCTGtgaaatatcacaattttaaaacttaaagcagagtgaaaaaaatgcacttacattattaaaacatttttcttgagTTAATCTTTCTGTAATTCATGATTGACAAATTTctgacaaattaaatttaaaaaaagtgctgacATAAAGGAAGGAGAGAAATCGCAATGAAATTTAtatgtttgaataaattattatctCCTTTGAATCAAGTGcatgtaatttatgtatttaacttTGAAATAACCATACTTCAAAACCATA
>XM_043255688.1
TCTGAGCAACAGCTGTATAAAGAATATAAAGGGACCTTTGAAACATGGCTTTTAGGAATGATATCAAGCATAATCATAAACTGAATTGTGTGGTTGTTTGAACAGTACTAGATAAAGTACTGTGGTATACAAAGAGAAGTCTCTGAGACGGATAAATGATTAACTGTGAGGTGGGATCAGAGTGAGACAAAACACGGCAGTGAATGAAAGGGACAAAAGAGCAGCTCATTTTCAATACAACACAGACATGTTTCTATCTCCACACCTGGGAGTAGACGACAGCATCTGAAATTAGAGGTGTAGTTAAGAATTGGTTTGGACAAAATGGTGACGCTGAAACATTTGAGCGTTAATGATAACGACGAAGACAGCGTTCCTCTGTTACCGGAAGCCAGCAGCTTGGAGAGCGCAACCACCCAACACAGCAGGGCAGAGTCCAGGGAATTCTTCCTTAGCCGGAGGAACAACTTCATTTTAAGCattgctctgttgctgagctgTTACTCGGCCATTCTGGTTCCTGCGTATCTGCCAAGACCAGAGCCCATCTGGACTAATGACAGCTCTGCTGAAACTCTGGCTCTGCTGAATCAGTCCTGTCGCAGCGGCTGGAGCGTGGAGAGGGTGAGAGCGTTGTCTATACCTGCTGGGCTGCTGAAGATTCCCGTGTTCCTGGAGAACGGCACAGGAGACTGGGCGCTGCCTCCTCCTCTGGGTCTGCAGGGTAGTGAGGAGATGGTGGCTCAGGCCCTGAAAGCCCTGCCTTATACTGCTGTACCCACTGGCCCAGAGACCTGCAGGAGATGCGTGGTGGTTGGAAGCGGTGGCATTTTACACGGCAAAAATCTTGGTCCTCACATAGACCAGTACAACATCATCATCAGAATGAACAATGCTCCAGTATTTGGATATGAAAAAGACGCTGGATCCAGAACTACCATTCGCCTCATTTATCCAGAAGCGGCTCCTTCTCAGACACAAGAATACGAGAGTACTGAACTGGTGGCTTTGGTGGCATTCAAGAGTTTAGATTTAGCGTGGCTCAAATCTGTGGTAACCAAAGAACCTTTGAGCTGGTGGTCTAAATTGTGGTTCTGGAAGGACGTAATAGACTCGATCCCTCTTCAACCAGAAAATGTTCGCATCCTGAATCCTGAAATCATGTACAGGACGGGGCAGGTGCTGCAGACCTACGCAGAGCAACAGAAAAAGatGGTGCCGACGCTGGGTATGACGGCGGTAGTTCTGGCCCTGCAGGTGTGTGACGAGGTGAGTTTAGCTGGATTTGGATACGACCTGCAGCACCCTGGAGCTCTGCTGCATTATTACGGCTCTCTCCGCATGGATGCCATGAACACACAGGTGGTTCACGACGTCAGCGCCGAGACCATCTTGCTGCGGGAGCTGGTCAAATCTGGAGCGGTGAGAGACCTCACTGGTGCACTGTGATGACTGCGGAAACTATCCATGCTTCCAATAGTTAAGAGAGATGGCAAACAGCAGAAAACTGTCCAGACACCCGGACTTGAGCAGGCCACCTTCAACGTCACAAAACAATAGGGTCAATCTCAACATTGCTATTCATAattttacaatgtttaaaaatgttaatatttaggGAAAATACAACATAAGACAATAcccaataacaaaataatatacaaaggCATTTAAGTGGACTCGACTAAaccaaactaaaactaaactaaaccaaaagCTACTATAGTAGACTTATAATAGACCCAAATACAGCTTTTTAAAGgatgacagaatattttatccaaaaaaattacttatttattttcttgcaaaaaaaaactgattacatagtgtttaaaaacattttttaaagcaaaacattgcgtttaaatacaaacaatactatagcaaaatataaatgacGTATTAATGTTAGTATCAGTTCTGtgaaatatcacaattttaaaacttaaagcagagtgaaaaaaatgcacttacattattaaaacatttttcttgagTTAATCTTTCTGTAATTCATGATTGACAAATTTctgacaaattaaatttaaaaaaagtgctgacATAAAGGAAGGAGAGAAATCGCAATGAAATTTAtatgtttgaataaattattatctCCTTTGAATCAAGTGcatgtaatttatgtatttaacttTGAAATAACCATACTTCAAAACCATA

Function

symbol description
st3gal7 Enables exo-alpha-sialidase activity and lactosylceramide alpha-2,3-sialyltransferase activity. Predicted to be involved in protein glycosylation. Predicted to be located in Golgi apparatus and membrane. Predicted to be integral component of membrane. Is expressed in digestive system; eye; heart; integument; and pleuroperitoneal region.

NR:

description
lactosylceramide alpha-2,3-sialyltransferase-like

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0097503 sialylation biological_process
GO:0030173 integral component of Golgi membrane cellular_component
GO:0004308 exo-alpha-sialidase activity molecular_function
GO:0047291 lactosylceramide alpha-2,3-sialyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255687.1 True 2189 mRNA 0.42 7 15872075 15876821
XM_043255688.1 False 2184 mRNA 0.42 7 15872075 15876837

Neighbor

gene id symbol gene type direction distance location
nkx3.3 nkx3.3,LOC107747300,LOC107665572,LOC107586090,LOC107579953 coding downstream 123615 15743917 ~ 15748460 (-)
pyroxd2 pyroxd2,LOC107747264,LOC107601051,LOC107665597,LOC107586065,LOC107702741,LOC107719216 coding downstream 161927 15701427 ~ 15710148 (-)
loxl4 loxl4,LOC107665580,LOC107601038,LOC107702733,LOC107719235,LOC107586088 coding downstream 190681 15654465 ~ 15681394 (-)
crtac1b crtac1b,crtac1,LOC107665558,LOC107702729,LOC107601025,LOC108443504 coding downstream 239505 15609866 ~ 15632570 (-)
sfrp5 sfrp5,LOC107747303,LOC107665568,LOC107728441,LOC107601040,LOC107564685 coding downstream 310518 15546586 ~ 15561557 (-)
morn4 morn4,LOC107719210,LOC107702749,LOC107747296 coding upstream 13136 15889973 ~ 15893677 (-)
ipmka LOC107747295,LOC107665575,LOC107719230,LOC107586076,LOC107549139 coding upstream 402828 16279665 ~ 16289717 (-)
LOC122356736 nanp,LOC107586073,LOC107736515,LOC107665564,LOC107549144,LOC107676393,LOC107719206 coding upstream 425372 16302209 ~ 16304328 (-)
LOC122356349 rmdn2,LOC101884968,LOC107719222,LOC107549137,LOC107665553,LOC107747279,LOC107676373 coding upstream 458187 16335024 ~ 16361805 (-)
LOC122356747 kmo,LOC107665616,LOC107549141,LOC101885014,LOC106576798 coding upstream 555858 16432695 ~ 16445739 (-)
G94200 NA non-coding downstream 108330 15763424 ~ 15763745 (-)
G94199 NA non-coding downstream 109232 15762551 ~ 15762843 (-)
G94145 NA non-coding downstream 231442 15640275 ~ 15640633 (-)
G94132 NA non-coding downstream 266362 15604687 ~ 15605713 (-)
G94063 NA non-coding downstream 588020 15279407 ~ 15284055 (-)
G94232 NA non-coding upstream 30433 15907270 ~ 15907491 (-)
G94247 NA non-coding upstream 90177 15967014 ~ 15967343 (-)
G94298 LOC107549156,LOC107665613,LOC107747251,LOC107676394,LOC107719205 non-coding upstream 453305 16330142 ~ 16332347 (-)
G94308 NA non-coding upstream 499736 16376573 ~ 16376923 (-)
G94411 opn3,LOC107549142,LOC107665579,LOC107747290,LOC107719228,LOC107586115 non-coding upstream 545829 16422666 ~ 16423793 (-)
LOC122356531 cnnm1,LOC107702746,LOC107719212,LOC107747260,LOC107601048,LOC107665556 other downstream 78535 15774777 ~ 15793540 (-)
nkx2.3 nkx2.3,LOC107747299,LOC107665571,LOC107702735,LOC107601037,LOC107586108,LOC107719236 other downstream 116947 15752636 ~ 15755128 (-)
zgc:123010 LOC107601052,LOC107747265,LOC107719217,LOC107665557,LOC107702739 other downstream 151259 15686270 ~ 15720816 (-)
G94147 NA other downstream 229572 15642031 ~ 15642503 (-)
G94128 NA other downstream 288158 15564617 ~ 15583917 (-)
G94216 NA other upstream 690 15877527 ~ 15885222 (-)
pcdh15a pcdh15a,LOC108443650,LOC107586072 other upstream 132850 16009687 ~ 16169204 (-)
cisd1 cisd1,LOC107549159,LOC107747252,LOC107665600,LOC105902329,LOC108443718 other upstream 413317 16290154 ~ 16292379 (-)
G94412 opn3,LOC107549142,LOC107665579,LOC107586115,LOC107747290,LOC107719228,LOC107676370 other upstream 548860 16425697 ~ 16426535 (-)
LOC122356193 slc35f4,slc35f3,LOC107664436,LOC107586844,LOC107559881,LOC107668528,LOC107747268,LOC107665565,LOC107664233,LOC107736862 other upstream 1497913 17374750 ~ 17387006 (-)

Expression


Co-expression Network