pygl (pygl,LOC107736703,LOC107683467,LOC107602977,LOC107553219,LOC106611459)


Basic Information

Item Value
gene id pygl
gene name pygl,LOC107736703,LOC107683467,LOC107602977,LOC107553219,LOC106611459
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 14307030 ~ 14314868 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256419.1
GGTCTCGTGAACCCCGGTGCTCGGTGTAACCGGTGATCTTCAGGATGGCGACTCCTCTAACGGACCAGGAGAAGCGCAAGCAGATCAGCATAAGAGGGATCGCCGGCGTGGAGAATGTGACAGAGCTGAAGAAAGGCTTCAACAGGCACCTGCACTTCACGCTGGTCAAAGACAGGAACGTCGCGACGCCGCGCGATTATTATTTCGCGCTCGCGCACACGGTGCGTGATCACCTGGTGGGCCGCTGGATCCGAACGCAGCAGTTCTACTACGAGGCCGACCCCAAGCGTGTATATTACCTGTCCCTGGAGTTCTACATGGGTAGAGCACTCCAGAACACCATGATTAATCTGGGTCTGCAGAACGCCTGTGATGAGGCTATCTACCAGcTCGGGTTGGACATGGAGGATCTGGAAGAGATGGAAGAAGATGCCGGATTAGGAAACGGAGGGCTGGGAAGATTAGCAgCTTGTTTTCTCGACTCTATGGCGACTCAGGGTCTGGCTGCTTATGGATATGGGATCCGATACGAGTATGGAATCTTCAACCAAAAAATTAAAGATGGCTGGCAGGTTGAGGAGGCGGATGATTGGCTGAGGTACGGTAACCCCTGGGAGAAAGCCCGTCCTGAGTTCATGCTGCCTGTGCATTTCTACGGCCGTGTGGAGGAAGAGGATGGGAAGGAGCCAAAATGGGTCGACACGCAGGTGGTCCTTGCCATGCCGTACGACACGCCAATCCCTGGATACATGAACAACACAGTGAACACAATGCGCTTGTGGTCTGCACGTGCACCCAATGACTTTAACCTGCGAGACTtTAATGTTGGTGATTATATTCAGGCAGTTTTGGACCGTAACTTAGCAGAAAACATTTCCCGTGTACTCTATCCAAATGACAATTTCTTTGAAGGGAGGGAGCTGCGGTTGAAGCAGGAATATTTTGTGGTGGCAGCGACTTTACAAGATGTGATTCGGCGCTTTAAGACCTCGAAGAGGAACTGCTCTGGACCGTTGTCATTTGATAGCTTCCCTGATAAGGTTGCCATTCAGCTGAATGATACTCACCCTGCTATGGCCATCCCTGAACTGATGAGGATATTTGTGGACATTGAACAACTAGACTGGGACACAGCTTGGAATATCACTAAACAAACCTTTGCATACACCAACCACACGGTTCTGCCTGAAGCTCTGGAGCGCTGGCCAGTCGAACTGATGGAGAAACTTTTACCCCGACATCTGCAGATCATATACAGGATCAACCAAATACATCTGGATCATATAGCATCTCTGTTTCCAGATGACATGGATCGCATCCGCAGGATGTCTCTGATCGAGGAGGAAGGGGGAAAGAGAGTAAACATGGCTCATCTCTGCATTGTGGGCTCACACAAAGTCAATGGAGTTGCAGAGATTCACTCCGACATCATCAAAAGAGACGTGTTCCGAGACTTCAGTGAGCTGGAACCAGAGAAGTTTCAGAATAAAACCAACGGCATCACACCACGACGCTGGCTGCTCCTCTGCAACCCAGGGCTGGCTGACCTGATCGCAGAGgcTATCGGTGAAGAATATGTGAAAGATCTGACTCAGCTGCAGAAGCTGAATGATCTGGTTGATGACGATGCTTTCATCCGAGATGTAGCCAAAGTCAAACAGgatAACAAGCTGAAGTTTGCGCACTATTTAGAGAAGGTGTACAAGGTGGACATAAATCCCGCATCCATGTTTGATGTCCATGTGAAAAGAATCCATGAATACAAACGGCAGCTGCTCAACTGCCTCCACGTCATCACCATGTACAACCGCATCAAAAGGAGCCCCATTAAACCGTTCGTACCACGGACTGTGATCATCGGTGGAAAGGCTGCGCCTGGATATCACATGGCAAAGATGATCATTAAGTTGATCACCTCCGTTGCTGACGTTGTGAATAACGATCCTGTGATTGGCCGTAAACTCAAGGTCATTTACCTGGAGAACTACAGAGTGTCACTTGCAGAGAAAGTGATTCCAGCTACAGACCTGTCAGAGCAGATCTCCACCGCAGGTACAGAAGCCTCCGGAACGGGAAACATGAAGTTCATGCTGAACGGGGCACTGACCATCGGCACTATGGATGGTGCCAACGTGGAGATGGCAGAAGAAGCCGGAGAAGAAAACCTCTTTATCTTTGGCATGAGAGTGGAAGATGTGGCTAAGATGGATACAGAAGGctatGATGCAATGCAGTATTACGAGAGTCTTCCGGAGCTGAAACAAGCCATAAATCAGATCAAAAGTGGTTATTTTTCACCGAAACAGCCTGAGATGTTCAGTGACATTATCAACATGCTTTTCCATCACGATCGGTTTAAAGTTTTCGCAGACTATGAGTCTTACGTCGAGTGTCAAGACAGAGTCAGCGCTCTGTATAAGGATCAGAGAGAGTGGACTCAGGTGGTGATAAAAAACATCGCAGCGTCTGGAAAGTTCTCTAGTGACCGTACCATTAAAGAATATGCCACTGAGATCTGGGGAGTGGAGCCCACCGACCTGAAGATTCCCCCACCCAGCGAACCCCGCGAAGCTCTGGAGGAAACCGCCCGTGCCCTGCGCAAGAACTGAACGCGTCAGCACAGAGTCATAGGATCATGAGAAGACTTGTTACAGTAATTAGAATTAATATACAATAACTACGTAACTTAGTAAGAATTCCTTTTTAGCTTTTGCTTCCTCTTTTTTCTAAAGGAGTGCCTTgtacaagcaaaaaaataaaataaaactaattttacttCAA

Function

symbol description
pygl Predicted to enable glycogen phosphorylase activity and pyridoxal phosphate binding activity. Predicted to be involved in glycogen catabolic process. Predicted to act upstream of or within glycogen metabolic process. Predicted to be active in cytoplasm. Is expressed in eye; heart; kidney; liver; and muscle. Human ortholog(s) of this gene implicated in glycogen storage disease; glycogen storage disease VI; and lactic acidosis. Orthologous to human PYGL (glycogen phosphorylase L).

NR:

description
PREDICTED: glycogen phosphorylase, liver form

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0008184 glycogen phosphorylase activity molecular_function
GO:0030170 pyridoxal phosphate binding molecular_function

KEGG:

id description
K00688 PYG, glgP; glycogen phosphorylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256419.1 True 2781 mRNA 0.48 20 14307030 14314868

Neighbor

gene id symbol gene type direction distance location
nin LOC107602976,LOC107654941,LOC107705448,LOC107736676 coding downstream 1492 14285769 ~ 14305538 (-)
sav1 sav1,LOC107705447,LOC107654943,LOC107736858,LOC107602931,LOC107682971,LOC107553191 coding downstream 21658 14277396 ~ 14285372 (-)
map4k5 map4k5,LOC107602968,LOC107705444,LOC107736580 coding downstream 39551 14243402 ~ 14267479 (-)
cdkl1 cdkl1,LOC107705442,LOC107736652,LOC107553215,LOC107602970,LOC107683176,LOC105890986 coding downstream 63760 14236100 ~ 14243270 (-)
l2hgdh l2hgdh,LOC107682613,LOC107736610,LOC107705441,LOC107654945 coding downstream 74708 14227198 ~ 14232322 (-)
trim9 trim9,LOC107553220,LOC107654940,LOC107683494 coding upstream 362 14315230 ~ 14333812 (-)
syne2b syne2,LOC107602924,LOC107683575,LOC107736849,LOC107553183 coding upstream 78791 14393659 ~ 14483039 (-)
kcnh5b kcnh5b,kcnh5,LOC107736800,LOC107683602,LOC107654906,LOC105897728 coding upstream 175836 14490704 ~ 14524802 (-)
ppp2r5eb ppp2r5eb,ppp2r5e,LOC107736817,LOC107683621 coding upstream 221777 14536645 ~ 14555851 (-)
wdr89 wdr89,LOC107602933,LOC107683929,LOC107553226 coding upstream 242376 14557244 ~ 14562378 (-)
G93905 NA non-coding downstream 117126 14187539 ~ 14189904 (-)
G93879 NA non-coding downstream 376736 13761046 ~ 13930294 (-)
G93855 NA non-coding downstream 618404 13685947 ~ 13688626 (-)
G93591 LOC107705361,LOC107654976,LOC107602941 non-coding downstream 640770 13665809 ~ 13666260 (-)
G93588 LOC107654976,LOC107553194,LOC107602941 non-coding downstream 643119 13661750 ~ 13663911 (-)
G94003 NA non-coding upstream 557564 14872432 ~ 14873014 (-)
G94016 NA non-coding upstream 666128 14980996 ~ 14995700 (-)
G94063 NA non-coding upstream 964539 15279407 ~ 15284055 (-)
G94132 NA non-coding upstream 1289819 15604687 ~ 15605713 (-)
G94145 NA non-coding upstream 1325407 15640275 ~ 15640633 (-)
srsf5a srsf5,srsf5a,LOC107683426,LOC107602962,LOC107654954,LOC108411053 other downstream 142616 14160323 ~ 14164414 (-)
LOC122356235 LOC107705430,LOC107683441,LOC107553204,LOC107602960,LOC107654922 other downstream 224240 14079532 ~ 14082790 (-)
G93875 LOC107680680,LOC107739875,LOC107576479,LOC107553198,LOC107705377,LOC107654967 other downstream 395193 13910339 ~ 13911837 (-)
LOC122356386 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 other downstream 402328 13898258 ~ 13904702 (-)
map3k4 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 other downstream 588716 13693026 ~ 13718314 (-)
lmbrd1 lmbrd1,LOC107747273,LOC107736841,LOC107664263 other upstream 709964 15024832 ~ 15099233 (-)
col9a1b col9a1b,LOC107736853,LOC107664283,LOC107747286,LOC107665560,LOC107747272,LOC107736861,LOC108429279,LOC107564679 other upstream 912464 15227332 ~ 15253357 (-)
G94128 NA other upstream 1249749 15564617 ~ 15583917 (-)
G94147 NA other upstream 1327163 15642031 ~ 15642503 (-)
zgc:123010 LOC107601052,LOC107747265,LOC107719217,LOC107665557,LOC107702739 other upstream 1371402 15686270 ~ 15720816 (-)

Expression


Co-expression Network