eomesb (eomes,LOC107730287,LOC107673324,LOC107745170,LOC107697593,LOC107570058)


Basic Information

Item Value
gene id eomesb
gene name eomes,LOC107730287,LOC107673324,LOC107745170,LOC107697593,LOC107570058
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 26116215 ~ 26121752 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043257679.1
ATCCGAAGTCCTTCCAGAGACCTGCGACCGACCTAAGAGCCCGGCGCGGGAGAAATCAGATCTCCAGGAAGAACGCACTTCCGGTAGGAGGCGCCAGAGAGCGGAAGCAATAAATCCAGCAGCGGCGGGATTCAGAGGCAGTCGGTGGCCCCCAGGAGCCCCTCTCAGTCTCCACACAAGAGCCTTTCAGCCTCGACCTGCGGAGGACATCAAGATGAAACTGTGACGGGCCGCGCGGGATCGGCAGGACGTGCAGACATGCCCGGGGAAGGATCCGGTTCCGCGGAGGAGGAGAACGGGAAAGTTTCACCGCTCGTGTGCGAGGACGAGCTCTCGAGCGGCGGCCGGTTCGTGCTGGACGGGCTCGGGTCCGGTCGTTACTTCATGATGGGCTCGACGCAGCCGGCGCCGGAGAGCTCCAGCCCGTGTTCCTTGTTTCCGTACGCGAGCCAGACCGGGGCCGTGTACGCCGGTTCGGACGGGTCTCGGTACGCGGCGTCGCTGCACTACGGCTCCGTGCTTCCCTCCGCGGGCTTCTGCCAGTCTCTGTGCGCGGGACGCGGCGACTTCGGCGCGGGATATCAGTTCGGACACGGCTCCGGAAACGGCTACCACTCGTACCAGGGCTCCGGTTCCGGTATCGGCTCCGGCGCGGGACTCAGGGCTCAGGTGTATCTGTGCAACCGGCCGCTGTGGCTCAAGTTCCACCGGCACCAAACCGAGATGATCATCACCAAACAGGGCAGGAGGATGTTCCCGTTTCTGAGTTTCAATCTTACCGGCTTGAGCTTGACGACGCATTATAACGTGTTTGTGGAGATCGTTCTGGCCGATCCGAACCACTGGAGGTTTCAGGGCGGGAAGTGGGTGACCTGCGGGAAAGCGGACAACAACATGCAAGGAAACAAGATCTACGTCCACCCCGAGTCCCCAAACACGGGCGCGCACTGGATGAGGCAGGAGATCTCTTTCGGGAAACTCAAACTGACGAACAACAAGGGAGCGACTGCCAACACCGCGCAGATGATCGTCCTTCAGTCTCTGCACAAGTACCAGCCCAGGCTTCACGTCGTGGAGGTGTCGGACGACGGGATGGAAACCTCGGGACGAGACTCCAAGACTCAGGTCTTCAGCTTCCCTGAGAACCAGTTCATCGCCGTCACGGCCTACCAGAACACCGATaTCACTCAGCTCAAGATCGACCACAATCCTTTTGCGAAGGGCTTTAGAGATAATTACGATTCGATGTACACGGTTGCGGAGCGCGAGCGCCTCACGCCGTCTCCGTCGGACTCTCCTCGCTCGCGCTACATGCAGCCCTTCCTTCAGGACCAGTTCGTCAACAACCTGACCCCGAGTCGCCTTTACGGCGGCGAGCGGACGGTCCCTCAGACGAACGGCATGCTGTCTGCTCCGGCGGAGGACGCTCAGAGGTGGCTGGTCACTTCGGTGCAGCAAAGCAGCGGGAGCAAGCTGGAGCTGACGGCGTACGAGGGCGACTACTCCAGCTCGATACTACCCTACAGCTTCAAATCTTTACCTCTGCAGAGCGCTCACTCGCTGGGCTACTACCCAGACGCCACCTTCGCATCGGTCACCGCCGGATGGGGCTCCAGGGGCTCTTATCCCAGGAAAGTGGCGTCCGGGCTGCCCTGGTCTCCCCGGCCGAGTCCCACGgatttcacagaagacctcGATAAAGACAAACCCCGGGAGGCGAGCGCGTTCGGTCAGGCCGCGGCCTGGATGGACAACACGCCGCCTCTGAAACCTCTGGACTCTGCGGAGCCGAGCATTTACTCGGTGGTTTGCAAGCGACGGCGGCTGTCTCCGAGCGAGTCCGGAGCCGAGAACTCTCCCGCGGTCAAGTGCGAAGAGTCCGGCGCCTCGGAGAGCTTCGGCAAGGACGCCTCGGCGAACGCCAAGACCATCGGCTATTACGCTTTCTACGCCGGCAGCTAGAGAAGCCGCCCGGTGTGAACGAGATCAGCCGGACTCCTTCGTTTGGCccttttgtaatttattaaagtCTCCGACCGATCGTTTCTCTCTGAAATAAGATGATatgtcattttgaaaatgccgtTGTATGCATTAAACCACTGCTGTTTTGGAttggtattttttaaaacatcccGTTTCTTATGAATGTAGAGTATTATTAATTCTTTTCAAGTATGCGGACATGATGAAACTGAAAACTGGCTCTTCTACCgcaactcttaaaaataaacta
>XM_043257680.1
GAAGTCCTTCCAGAGACCTGCGACCGACCTAAGAGCCCGGCGCGGGAGAAATCAGATCTCCAGGAAGAACGCACTTCCGGTAGGAGGCGCCAGAGAGCGGAAGCAATAAATCCAGCAGCGGCGGGATTCAGAGGCAGTCGGTGGCCCCCAGGAGCCCCTCTCAGTCTCCACACAAGAGCCTTTCAGCCTCGACCTGCGGAGGACATCAAGATGAAACTGGCTTCCCTGAAAGAATCGTTCGTTCTGTCTCAGTGACGGGCCGCGCGGGATCGGCAGGACGTGCAGACATGCCCGGGGAAGGATCCGGTTCCGCGGAGGAGGAGAACGGGAAAGTTTCACCGCTCGTGTGCGAGGACGAGCTCTCGAGCGGCGGCCGGTTCGTGCTGGACGGGCTCGGGTCCGGTCGTTACTTCATGATGGGCTCGACGCAGCCGGCGCCGGAGAGCTCCAGCCCGTGTTCCTTGTTTCCGTACGCGAGCCAGACCGGGGCCGTGTACGCCGGTTCGGACGGGTCTCGGTACGCGGCGTCGCTGCACTACGGCTCCGTGCTTCCCTCCGCGGGCTTCTGCCAGTCTCTGTGCGCGGGACGCGGCGACTTCGGCGCGGGATATCAGTTCGGACACGGCTCCGGAAACGGCTACCACTCGTACCAGGGCTCCGGTTCCGGTATCGGCTCCGGCGCGGGACTCAGGGCTCAGGTGTATCTGTGCAACCGGCCGCTGTGGCTCAAGTTCCACCGGCACCAAACCGAGATGATCATCACCAAACAGGGCAGGAGGATGTTCCCGTTTCTGAGTTTCAATCTTACCGGCTTGAGCTTGACGACGCATTATAACGTGTTTGTGGAGATCGTTCTGGCCGATCCGAACCACTGGAGGTTTCAGGGCGGGAAGTGGGTGACCTGCGGGAAAGCGGACAACAACATGCAAGGAAACAAGATCTACGTCCACCCCGAGTCCCCAAACACGGGCGCGCACTGGATGAGGCAGGAGATCTCTTTCGGGAAACTCAAACTGACGAACAACAAGGGAGCGACTGCCAACACCGCGCAGATGATCGTCCTTCAGTCTCTGCACAAGTACCAGCCCAGGCTTCACGTCGTGGAGGTGTCGGACGACGGGATGGAAACCTCGGGACGAGACTCCAAGACTCAGGTCTTCAGCTTCCCTGAGAACCAGTTCATCGCCGTCACGGCCTACCAGAACACCGATaTCACTCAGCTCAAGATCGACCACAATCCTTTTGCGAAGGGCTTTAGAGATAATTACGATTCGATGTACACGGTTGCGGAGCGCGAGCGCCTCACGCCGTCTCCGTCGGACTCTCCTCGCTCGCGCTACATGCAGCCCTTCCTTCAGGACCAGTTCGTCAACAACCTGACCCCGAGTCGCCTTTACGGCGGCGAGCGGACGGTCCCTCAGACGAACGGCATGCTGTCTGCTCCGGCGGAGGACGCTCAGAGGTGGCTGGTCACTTCGGTGCAGCAAAGCAGCGGGAGCAAGCTGGAGCTGACGGCGTACGAGGGCGACTACTCCAGCTCGATACTACCCTACAGCTTCAAATCTTTACCTCTGCAGAGCGCTCACTCGCTGGGCTACTACCCAGACGCCACCTTCGCATCGGTCACCGCCGGATGGGGCTCCAGGGGCTCTTATCCCAGGAAAGTGGCGTCCGGGCTGCCCTGGTCTCCCCGGCCGAGTCCCACGgatttcacagaagacctcGATAAAGACAAACCCCGGGAGGCGAGCGCGTTCGGTCAGGCCGCGGCCTGGATGGACAACACGCCGCCTCTGAAACCTCTGGACTCTGCGGAGCCGAGCATTTACTCGGTGGTTTGCAAGCGACGGCGGCTGTCTCCGAGCGAGTCCGGAGCCGAGAACTCTCCCGCGGTCAAGTGCGAAGAGTCCGGCGCCTCGGAGAGCTTCGGCAAGGACGCCTCGGCGAACGCCAAGACCATCGGCTATTACGCTTTCTACGCCGGCAGCTAGAGAAGCCGCCCGGTGTGAACGAGATCAGCCGGACTCCTTCGTTTGGCccttttgtaatttattaaagtCTCCGACCGATCGTTTCTCTCTGAAATAAGATGATatgtcattttgaaaatgccgtTGTATGCATTAAACCACTGCTGTTTTGGAttggtattttttaaaacatcccGTTTCTTATGAATGTAGAGTATTATTAATTCTTTTCAAGTATGCGGACATGATGAAACTGAAAACTGGCTCTTCTACCgcaactcttaaaaataaacta
>XM_043257681.1
CCGAAGTCCTTCCAGAGACCTGCGACCGACCTAAGAGCCCGGCGCGGGAGAAATCAGATCTCCAGGAAGAACGCACTTCCGGTAGGAGGCGCCAGAGAGCGGAAGCAATAAATCCAGCAGCGGCGGGATTCAGAGGCAGTCGGTGGCCCCCAGGAGCCCCTCTCAGTCTCCACACAAGAGCCTTTCAGCCTCGACCTGCGGAGGACATCAAGATGAAACTGGAGGATGTTCCCGTTTCTGAGTTTCAATCTTACCGGCTTGAGCTTGACGACGCATTATAACGTGTTTGTGGAGATCGTTCTGGCCGATCCGAACCACTGGAGGTTTCAGGGCGGGAAGTGGGTGACCTGCGGGAAAGCGGACAACAACATGCAAGGAAACAAGATCTACGTCCACCCCGAGTCCCCAAACACGGGCGCGCACTGGATGAGGCAGGAGATCTCTTTCGGGAAACTCAAACTGACGAACAACAAGGGAGCGACTGCCAACACCGCGCAGATGATCGTCCTTCAGTCTCTGCACAAGTACCAGCCCAGGCTTCACGTCGTGGAGGTGTCGGACGACGGGATGGAAACCTCGGGACGAGACTCCAAGACTCAGGTCTTCAGCTTCCCTGAGAACCAGTTCATCGCCGTCACGGCCTACCAGAACACCGATaTCACTCAGCTCAAGATCGACCACAATCCTTTTGCGAAGGGCTTTAGAGATAATTACGATTCGATGTACACGGTTGCGGAGCGCGAGCGCCTCACGCCGTCTCCGTCGGACTCTCCTCGCTCGCGCTACATGCAGCCCTTCCTTCAGGACCAGTTCGTCAACAACCTGACCCCGAGTCGCCTTTACGGCGGCGAGCGGACGGTCCCTCAGACGAACGGCATGCTGTCTGCTCCGGCGGAGGACGCTCAGAGGTGGCTGGTCACTTCGGTGCAGCAAAGCAGCGGGAGCAAGCTGGAGCTGACGGCGTACGAGGGCGACTACTCCAGCTCGATACTACCCTACAGCTTCAAATCTTTACCTCTGCAGAGCGCTCACTCGCTGGGCTACTACCCAGACGCCACCTTCGCATCGGTCACCGCCGGATGGGGCTCCAGGGGCTCTTATCCCAGGAAAGTGGCGTCCGGGCTGCCCTGGTCTCCCCGGCCGAGTCCCACGgatttcacagaagacctcGATAAAGACAAACCCCGGGAGGCGAGCGCGTTCGGTCAGGCCGCGGCCTGGATGGACAACACGCCGCCTCTGAAACCTCTGGACTCTGCGGAGCCGAGCATTTACTCGGTGGTTTGCAAGCGACGGCGGCTGTCTCCGAGCGAGTCCGGAGCCGAGAACTCTCCCGCGGTCAAGTGCGAAGAGTCCGGCGCCTCGGAGAGCTTCGGCAAGGACGCCTCGGCGAACGCCAAGACCATCGGCTATTACGCTTTCTACGCCGGCAGCTAGAGAAGCCGCCCGGTGTGAACGAGATCAGCCGGACTCCTTCGTTTGGCccttttgtaatttattaaagtCTCCGACCGATCGTTTCTCTCTGAAATAAGATGATatgtcattttgaaaatgccgtTGTATGCATTAAACCACTGCTGTTTTGGAttggtattttttaaaacatcccGTTTCTTATGAATGTAGAGTATTATTAATTCTTTTCAAGTATGCGGACATGATGAAACTGAAAACTGGCTCTTCTACCgcaactcttaaaaataaacta

Function

symbol description
eomes Enables sequence-specific double-stranded DNA binding activity. Involved in CD8-positive, alpha-beta T cell differentiation involved in immune response and brain development. Acts upstream of or within positive regulation of transcription by RNA polymerase II. Predicted to be located in chromatin.

NR:

description
eomesodermin-like protein b

GO:

id name namespace
GO:0006351 transcription, DNA-templated biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043257679.1 False 2236 mRNA 0.59 7 26116215 26121752
XM_043257680.1 True 2265 mRNA 0.59 7 26116219 26121752
XM_043257681.1 False 1711 mRNA 0.56 6 26116217 26121752

Neighbor

gene id symbol gene type direction distance location
azi2 LOC107673336,LOC107745144,LOC107570847,LOC107570057,LOC107697570 coding upstream 27234 26076905 ~ 26088981 (+)
LOC122357988 LOC107730291,LOC107673329,LOC107570855,LOC107697582,LOC107745168,LOC792958 coding upstream 41288 26068927 ~ 26074927 (+)
nr0b2a LOC107738278,LOC107570854,LOC107673326,LOC107697581,LOC107555404,LOC107737292 coding upstream 110169 26003920 ~ 26006046 (+)
LOC122357970 pabpc1a,LOC107673332,LOC107737898,LOC108431046,LOC108256232 coding upstream 117924 25990764 ~ 25998291 (+)
LOC122357982 NA coding upstream 125197 25981040 ~ 25991018 (+)
LOC122357542 ttc24 coding downstream 33887 26155639 ~ 26166583 (+)
LOC122357494 NA coding downstream 81101 26202853 ~ 26209478 (+)
LOC122357495 LOC107715525 coding downstream 89947 26211699 ~ 26215585 (+)
creb3l4 LOC107570797,LOC107573899,LOC107739848,LOC107745156 coding downstream 152419 26274171 ~ 26280161 (+)
clk2b LOC107739840,LOC107679560,LOC107573901 coding downstream 159756 26281508 ~ 26293384 (+)
G102352 NA non-coding upstream 14372 26099662 ~ 26101843 (+)
G102344 NA non-coding upstream 25955 26085380 ~ 26090260 (+)
G102341 NA non-coding upstream 57776 26058163 ~ 26058439 (+)
G102335 NA non-coding upstream 60111 26047050 ~ 26056104 (+)
G102334 wdtc1,LOC107570846,LOC107673335 non-coding upstream 76140 26038576 ~ 26040075 (+)
G102385 NA non-coding downstream 98482 26220234 ~ 26277550 (+)
G102393 NA non-coding downstream 113130 26234882 ~ 26236719 (+)
G102403 NA non-coding downstream 144722 26266474 ~ 26269660 (+)
G102423 spag1,LOC107739837,LOC107565360 non-coding downstream 266194 26387946 ~ 26388699 (+)
G102405 vps13b,LOC107671824 non-coding downstream 315657 26437409 ~ 26441594 (+)
G102332 wdtc1,LOC107738793,LOC107673335 other upstream 80577 26032979 ~ 26035638 (+)
LOC122358267 LOC107593202,LOC107740141,LOC107680337,LOC107554835,LOC108268827,LOC105904295 other upstream 1057015 25057752 ~ 25059200 (+)
G102017 LOC107680957,LOC107593209,LOC107740154,LOC100534741 other upstream 1899452 24216243 ~ 24216763 (+)
tmem35 tmem35a,tmem35,LOC107680989,LOC107740187,LOC107724834,LOC107688707 other upstream 2026693 24086724 ~ 24089522 (+)
nitr14b NA other upstream 2143966 23970152 ~ 23972249 (+)
gnrhr3 LOC107567517,LOC107673322,LOC108436550,LOC105908885 other downstream 46806 26168558 ~ 26175734 (+)
khdc4 kiaa0907,LOC107570803,LOC107565361,LOC107679549 other downstream 252581 26374333 ~ 26383784 (+)
LOC122357543 vps13b,LOC107570792,LOC107671824 other downstream 279775 26401527 ~ 26429629 (+)

Expression


Co-expression Network