G102844


Basic Information

Item Value
gene id G102844
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 877159 ~ 880639 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU152021
GGAGACAATGAAGCGCGAGCGCGGAGTTCACTGCGCCGAAACCGACTCAGGCGCGCGATCGGAAGCCTCCACAGAAATAACTGATCTTGAGGAACCTCCTACCAGTGTTCTTCGGGTTCCTGCTGCTGAGCCTGTGGTGCAGGAAGACCATGATGCTCCAGTCAGTGTGAAGTGTTGGACAGCAGTGAAGTGGACACGAGACCTGAAGGTGTGAGACCAGTCCCTCTGAAAAGTTTCATCTGCCAGGCAGAATAGAACGGCCTCTTGGACCAACCACTTTAACGTCTTGCCGTATAAAACAATCCCGTATGTATAAAACGTCTCAGAAATGCTCCTAAGAATAGTCTTAAGTTCTTAGTAAAAAGTAGGACATTTCTAAGAGTGTGAGACTAACAGAAAGATAACAGAAACTTTCGGTAAAGTGTTGACTGAGGTGTCTTAAGTATACACAGCATTTAATGTAACTATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152021 True 474 lncRNA 0.46 3 877159 880639

Neighbor

gene id symbol gene type direction distance location
ndufc2 NA coding downstream 422031 453990 ~ 455128 (-)
LOC122359285 tenm4,LOC107740368,LOC107722800,LOC107699823,LOC107593476 coding downstream 525286 286782 ~ 351873 (-)
LOC122358932 LOC107755786,LOC107583475,LOC107680794,LOC107751746,LOC107564942 coding downstream 793285 63236 ~ 83874 (-)
LOC122358934 rragd,LOC107693082,LOC107564985,LOC107751745,LOC107755772,LOC107680791,LOC107583676 coding downstream 842219 24874 ~ 34940 (-)
sgcg sgcg,LOC107593480,LOC107670403,LOC107724972,LOC107699809,LOC107561749 coding upstream 84484 965123 ~ 972682 (-)
slc37a4a slc37a4a,slc37a4,LOC107670393,LOC107593481 coding upstream 96722 977361 ~ 983431 (-)
ptgir ptgir,LOC107740394,LOC107670342,LOC107724945,LOC107567267 coding upstream 128115 1008754 ~ 1035381 (-)
si:dkey-202g17.3 LOC107699811,LOC107561740,LOC107724949,LOC107740393 coding upstream 161224 1041863 ~ 1048393 (-)
ppm1na ppm1na,LOC107670333,LOC107699831,LOC107724970,LOC107567276,LOC107574346 coding upstream 168874 1049513 ~ 1055430 (-)
G102803 LOC107740368,LOC107593476,LOC107670431,LOC107561733,LOC107722800 non-coding downstream 21570 805843 ~ 855589 (-)
G102779 rab30,LOC107670675,LOC107561736,LOC107699807 non-coding downstream 413823 459653 ~ 463336 (-)
G102767 NA non-coding downstream 441215 435560 ~ 435944 (-)
G102753 NA non-coding downstream 628310 243276 ~ 248849 (-)
G102850 NA non-coding upstream 56949 937588 ~ 937815 (-)
G102855 LOC107593479,LOC107740366,LOC107670382,LOC107724954,LOC107699827,LOC107561750 non-coding upstream 77055 957694 ~ 963949 (-)
G102858 LOC107593496 non-coding upstream 106940 987579 ~ 988583 (-)
G102862 NA non-coding upstream 115978 996617 ~ 998195 (-)
G102953 NA non-coding upstream 243423 1124062 ~ 1128328 (-)
LOC122359153 lrrc7,LOC107709201,LOC107659039,LOC107692363,LOC107739104 other downstream 726568 98628 ~ 150591 (-)
G103094 slc1a5,LOC107752279,LOC107699227,LOC107699184,LOC107566078,LOC107592660 other upstream 896381 1777020 ~ 1828300 (-)
G103130 prkd2,LOC107699186,LOC107728165,LOC107699228,LOC107566079 other upstream 964360 1844999 ~ 1845494 (-)
scn2b scn2b,LOC107752284,LOC107699236,LOC107564053,LOC107699190,LOC107561494,LOC107728168 other upstream 1257928 2138567 ~ 2161269 (-)
G103183 NA other upstream 1326708 2207347 ~ 2291926 (-)
LOC122359207 nicn1,LOC107691891,LOC107564394,LOC107708487,LOC107678153 other upstream 1793162 2673801 ~ 2675825 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G20 NA non-coding CI01000000 null 26092 ~ 26365 (+)
bowfin (Amia calva) G21 NA non-coding CM030121.1 CM030121.1 99738 ~ 101898 (+)
mexican tetra (Astyanax mexicanus) G23 NA non-coding NC_035897.1 CM008300.1 128329 ~ 129744 (+)