G104007


Basic Information

Item Value
gene id G104007
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 6119865 ~ 6120140 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU153580
AAACCAGTGAGGAGGGCCTGCTTTAGGTGCTGTTGATAAGGGCTTGCTGCATCATCATTTATTGGTATTCCACTATTAGCTTGGAACACGGTTTCCATTCTTGATCTGTATTCAGATACATCTTCACCTTCTTTCTGTCTACACTGTGCTATTTTTGCATAGTCTGGCCTAGTAGCCAAACTAGTGGTGATTCTCAGGCATACTGCATCAAATGCAttagttaaaacatttgaattggGTGCTAATGTTTCACCTTCAGCATTCTGTCCAGTATAG

Function

GO:

id name namespace
GO:0008301 DNA binding, bending molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153580 True 276 lncRNA 0.41 1 6119865 6120140

Neighbor

gene id symbol gene type direction distance location
eif4h eif4h,LOC107704308,LOC107744028 coding downstream 122935 5986535 ~ 5996930 (-)
rffl LOC107720964,LOC107744027,LOC107704306 coding downstream 135609 5966954 ~ 5984256 (-)
tfdp2 tfdp2,LOC107680101,LOC107720963,LOC107704305,LOC107744026 coding downstream 158977 5926061 ~ 5960888 (-)
atp1b3b atp1b3b,LOC107704304,LOC107680094,LOC107720962,LOC107563006 coding downstream 195411 5903705 ~ 5924454 (-)
ece2b ece2,ece2b,LOC107680093,LOC107704303,LOC107561301,LOC107563005 coding downstream 232351 5842812 ~ 5887514 (-)
lipt2 lipt2,LOC107677087,LOC107684031,LOC107720748 coding upstream 42614 6162754 ~ 6164699 (-)
LOC122359410 abcg1,LOC107684024,LOC107561305,LOC107723828,LOC108426925,LOC107755138,LOC107677096,LOC108277612 coding upstream 122781 6242921 ~ 6255555 (-)
zmp:0000001236 maml2,LOC107598561,LOC107744020,LOC107714095,LOC107555004 coding upstream 229346 6349486 ~ 6394220 (-)
LOC122358910 cdkl1,LOC107551271,LOC107680089,LOC107598661,LOC108424097,LOC105890602,LOC107703957 coding upstream 277649 6397789 ~ 6412695 (-)
LOC122359416 NA coding upstream 422728 6542868 ~ 6548235 (-)
LOC122358585 NA non-coding downstream 171603 5947053 ~ 5948262 (-)
G103915 NA non-coding downstream 296810 5822518 ~ 5823055 (-)
G103895 NA non-coding downstream 341860 5750972 ~ 5778005 (-)
LOC122358398 NA non-coding downstream 359912 5759503 ~ 5759953 (-)
G103889 NA non-coding downstream 472289 5639655 ~ 5647576 (-)
G104009 NA non-coding upstream 1474 6121614 ~ 6121921 (-)
G104010 rnf169,LOC107684027,LOC107755140,LOC107677086,LOC107726617,LOC107567382 non-coding upstream 49328 6169468 ~ 6173454 (-)
G104015 spcs2,LOC107677086,LOC107567375 non-coding upstream 55459 6175599 ~ 6177242 (-)
G104019 NA non-coding upstream 59284 6179424 ~ 6180800 (-)
G104225 NA non-coding upstream 247662 6367802 ~ 6429761 (-)
LOC122359408 LOC107744036,LOC107704290,LOC107562996,LOC107680065 other downstream 318784 5794803 ~ 5801081 (-)
pgm2l1 pgm2l1,LOC107684026,LOC107677044,LOC107569072 other downstream 370114 5737456 ~ 5749751 (-)
G103825 NA other downstream 680918 5438048 ~ 5438947 (-)
LOC122359119 NA other downstream 1410785 4707814 ~ 4709080 (-)
pcp4b NA other downstream 1546866 4506356 ~ 4572999 (-)
G104011 NA other upstream 26033 6146173 ~ 6146517 (-)
mmp28 mmp28 other upstream 991116 7111256 ~ 7119286 (-)
G104603 LOC107703035,LOC107750119,LOC107551239 other upstream 1449706 7569846 ~ 7572090 (-)
G104628 NA other upstream 1519504 7639644 ~ 7640339 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other upstream 1837696 7957836 ~ 7958231 (-)

Expression


Co-expression Network