G104570


Basic Information

Item Value
gene id G104570
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 7490106 ~ 7490776 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU154424
ATTAAACAATTGccagcccacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacgggaagGCTGTAAGACTGATGTCTTCAttagacagaacaacagaaaatataaatttgtcaGTGCCGTTATGATTAGTTTGGATGATACACATTTGCTCTAAATCCACTTGATCAAAtgatttctctttctttacTAAATGATGAAATCTGcatcagttcagttcaatttaTCTTGGTATGATTCTTAGCTGTTTAGCTGAAGACAAATATAATGGCTGAAGTATACGGAGGATgtcgtttctttcttttttttaagaaccgAAAGAACAGTACATTGGATtagaaatgcaaaatgcattggATATTATTACAGCAAACGCTGCGGTGAATTCCTGTGCCGTGCAAGTGAACGTTACAGAGTCCTCCTACAGAGCTGTTATTGAGATCAGACGATCTGCGCCCACAGCGGGAAATCTGTGACTGTCTGCATGTGCGCCATTTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154424 True 613 lncRNA 0.42 2 7490106 7490776

Neighbor

gene id symbol gene type direction distance location
shox2 shox2,LOC107709009,LOC107598669,LOC107703017,LOC107720426,LOC107661335 coding downstream 107998 7375213 ~ 7382108 (-)
dock10 dock10,LOC107703970,LOC107703008 coding downstream 256747 7160336 ~ 7233359 (-)
porb porb,LOC107728227,LOC107598574,LOC107703971,LOC107749051,LOC108424088,LOC108280677 coding downstream 339265 7128335 ~ 7150841 (-)
taf15 taf15,LOC107703972,LOC107728230,LOC107598573 coding downstream 363969 7120062 ~ 7126137 (-)
LOC122358868 LOC107703955,LOC107744030,LOC107598617 coding downstream 415848 7062700 ~ 7074258 (-)
srprb srprb,LOC107720437,LOC107708336,LOC107551302,LOC107573098 coding upstream 44819 7535595 ~ 7538399 (-)
dnajc30b NA coding upstream 83789 7574565 ~ 7575452 (-)
otol1b otol1b,LOC107551238,LOC107662588,LOC107567675,LOC107720408,LOC107703004,LOC107750108 coding upstream 116114 7606890 ~ 7615046 (-)
nmd3 nmd3,LOC107750082,LOC107720439 coding upstream 137901 7628677 ~ 7637765 (-)
nudt8 nudt8,LOC107567678,LOC107720444 coding upstream 189937 7680713 ~ 7684393 (-)
G104252 cldne,LOC107680074,LOC107703976,LOC107598571,LOC107551262 non-coding downstream 392039 7042394 ~ 7098067 (-)
G104314 LOC107680077,LOC107551265,LOC107703961,LOC107744046,LOC107598567 non-coding downstream 450914 7037726 ~ 7039192 (-)
G104294 NA non-coding downstream 453276 6806292 ~ 7036830 (-)
LOC122358744 NA non-coding downstream 569846 6919910 ~ 6920260 (-)
LOC122358745 NA non-coding downstream 648414 6841336 ~ 6841692 (-)
G104572 NA non-coding upstream 6210 7496986 ~ 7497259 (-)
G104585 NA non-coding upstream 19358 7510134 ~ 7513305 (-)
G104589 NA non-coding upstream 33050 7523826 ~ 7524108 (-)
G104595 NA non-coding upstream 55180 7545956 ~ 7547059 (-)
G104597 NA non-coding upstream 59158 7549934 ~ 7550885 (-)
mmp28 mmp28 other downstream 370820 7111256 ~ 7119286 (-)
G104011 NA other downstream 1343589 6146173 ~ 6146517 (-)
LOC122359408 LOC107744036,LOC107704290,LOC107562996,LOC107680065 other downstream 1689025 5794803 ~ 5801081 (-)
pgm2l1 pgm2l1,LOC107684026,LOC107677044,LOC107569072 other downstream 1740355 5737456 ~ 5749751 (-)
G103825 NA other downstream 2051159 5438048 ~ 5438947 (-)
G104603 LOC107703035,LOC107750119,LOC107551239 other upstream 79070 7569846 ~ 7572090 (-)
G104628 NA other upstream 148868 7639644 ~ 7640339 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other upstream 467060 7957836 ~ 7958231 (-)
nipsnap2 gbas,LOC106581053 other upstream 554046 8044822 ~ 8050710 (-)
zgc:114130 zgc:114130,LOC107758457,LOC107749642,LOC107678256,LOC107560624,LOC107684198,LOC107561367 other upstream 1019606 8510382 ~ 8513459 (-)

Expression


Co-expression Network